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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 6
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12691 Canola mitochondrion 73.61 76.65
Bra033960.1-P Field mustard mitochondrion 73.61 76.65
CDX81471 Canola mitochondrion 74.14 76.36
CDY01884 Canola mitochondrion 71.77 76.19
Bra004282.1-P Field mustard mitochondrion 72.56 76.18
CDX96047 Canola mitochondrion 72.03 75.62
AT1G25240.2 Thale cress mitochondrion 66.75 67.11
VIT_01s0011g06370.t01 Wine grape mitochondrion 44.33 43.64
AT1G14686.1 Thale cress cytosol 37.99 42.48
Solyc01g005070.2.1 Tomato mitochondrion 43.27 41.21
PGSC0003DMT400058608 Potato mitochondrion 43.27 41.0
KRH58584 Soybean mitochondrion 41.95 39.85
KRH42490 Soybean cytosol 41.95 39.36
Solyc04g008350.1.1 Tomato mitochondrion 40.11 38.68
PGSC0003DMT400075705 Potato mitochondrion 39.84 38.52
KRG89239 Soybean cytosol, mitochondrion 38.52 38.02
AT2G01920.1 Thale cress mitochondrion 31.13 37.82
KRH49763 Soybean mitochondrion 38.26 37.28
EES13983 Sorghum mitochondrion 36.68 34.58
Os08t0467300-01 Rice mitochondrion 35.36 33.84
GSMUA_Achr7P18620_001 Banana mitochondrion 34.3 33.51
Zm00001d049990_P001 Maize mitochondrion 34.04 33.25
EER96828 Sorghum mitochondrion 33.77 31.84
Zm00001d005869_P001 Maize mitochondrion 32.98 31.41
GSMUA_Achr8P22890_001 Banana mitochondrion 32.19 30.73
TraesCS5A01G297400.1 Wheat mitochondrion 30.08 30.24
TraesCS5B01G296700.1 Wheat mitochondrion 30.08 29.84
GSMUA_Achr7P02390_001 Banana cytosol 32.45 29.57
GSMUA_Achr3P20230_001 Banana mitochondrion 24.8 28.4
HORVU5Hr1G078270.1 Barley cytosol 30.61 26.3
Zm00001d031760_P001 Maize mitochondrion 34.04 26.22
TraesCS5D01G304500.1 Wheat mitochondrion 29.82 25.57
HORVU7Hr1G089710.1 Barley mitochondrion 11.87 25.42
AT1G33340.1 Thale cress cytosol, mitochondrion, nucleus 16.89 17.11
AT1G03050.1 Thale cress cytosol, mitochondrion 24.27 15.36
AT2G01600.1 Thale cress cytosol, mitochondrion 22.96 15.24
AT4G32285.2 Thale cress cytosol 25.07 14.96
AT2G25430.1 Thale cress cytosol 25.07 14.55
AT5G35200.2 Thale cress cytosol 20.84 14.52
AT4G02650.1 Thale cress mitochondrion 22.96 14.24
AT5G57200.1 Thale cress cytosol 21.9 14.04
AT4G25940.1 Thale cress cytosol 21.64 13.64
AT1G05020.1 Thale cress cytosol 21.9 12.71
AT1G14910.1 Thale cress mitochondrion 21.9 11.99
Protein Annotations
Gene3D:1.20.58.150Gene3D:1.25.40.90MapMan:35.1EntrezGene:843139UniProt:A0A178W783ProteinID:AAG52005.1
ProteinID:AEE34750.1EMBL:AF410278InterPro:ANTH_domArrayExpress:AT1G68110EnsemblPlantsGene:AT1G68110RefSeq:AT1G68110
TAIR:AT1G68110RefSeq:AT1G68110-TAIR-GEnsemblPlants:AT1G68110.1TAIR:AT1G68110.1EMBL:AY149923Unigene:At.19366
InterPro:Clathrin_AP_dom2InterPro:ENTHInterPro:ENTH_VHSGO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005543GO:GO:0005545GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005794GO:GO:0005905GO:GO:0006810GO:GO:0006897GO:GO:0008150GO:GO:0008289
GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0030136GO:GO:0030276GO:GO:0031410
GO:GO:0048268InterPro:IPR008942InterPro:IPR013809InterPro:IPR014712RefSeq:NP_564922.1ProteinID:OAP14340.1
PFAM:PF07651PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054
PO:PO:0001185PO:PO:0007095PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0009009PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0020030PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025195PO:PO:0025281PFscan:PS50942PANTHER:PTHR22951PANTHER:PTHR22951:SF19
UniProt:Q9C9X5SMART:SM00273SUPFAM:SSF48464SUPFAM:SSF89009UniParc:UPI00000AC69DSEG:seg
Description
Putative clathrin assembly protein At1g68110 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X5]
Coordinates
chr1:+:25524718..25526150
Molecular Weight (calculated)
43843.0 Da
IEP (calculated)
7.825
GRAVY (calculated)
-0.259
Length
379 amino acids
Sequence
(BLAST)
001: MKLWKRAAAA IKDRKSLLAV GFSRRNSSYR NADLEAAIIK ATSHDDSSVD YSNAHRVYKW IRSSPLNLKT LVYAISSRVN HTRSWIVALK SLMLLHGVLC
101: CKVPSVVGEF RRLPFDLSDF SDGHSCLSKT WGFNVFVRTY FAFLHHYSSF LSDQIHRLRG NNRRSLEKTS DSVIQELERI QKLQSLLDMI LQIRPVADNM
201: KKTLILEAMD CLVIESINIY GRICGAVMKV LPLAGKSEAA TVLKIVNKTT SQGEDLIVYF EFCKGFGVSN AREIPQFVRI PEEEVEAIEK MIDTVQEKPK
301: LEKDEEKEDE KAMVVLEQPK KLQTIITDKW EIFEDDYRCF DRKDKWEIFE DEYHQNHLPL ITMNQPVYIT YTMPDLITF
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.