Factsheet for TraesCS5D01G304500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G297400.1	Wheat	mitochondrion	81.0	94.96
TraesCS5B01G296700.1	Wheat	mitochondrion	81.0	93.72
HORVU5Hr1G078270.1	Barley	cytosol	87.33	87.53
HORVU7Hr1G089710.1	Barley	mitochondrion	32.35	80.79
Os08t0467300-01	Rice	mitochondrion	59.73	66.67
EES13983	Sorghum	mitochondrion	58.82	64.68
Zm00001d049990_P001	Maize	mitochondrion	55.43	63.14
Zm00001d031760_P001	Maize	mitochondrion	59.73	53.66
GSMUA_Achr7P18620_001	Banana	mitochondrion	39.14	44.59
GSMUA_Achr8P22890_001	Banana	mitochondrion	39.59	44.08
GSMUA_Achr3P20230_001	Banana	mitochondrion	30.77	41.09
GSMUA_Achr7P02390_001	Banana	cytosol	37.1	39.42
CDY64692	Canola	mitochondrion	28.51	33.25
Bra012491.1-P	Field mustard	mitochondrion	28.28	33.07
CDY57160	Canola	mitochondrion	28.05	32.8
Bra024772.1-P	Field mustard	mitochondrion	27.83	32.63
CDY03862	Canola	mitochondrion	28.05	32.55
CDX81471	Canola	mitochondrion	26.92	32.34
CDY60368	Canola	mitochondrion	27.6	32.28
CDY12691	Canola	mitochondrion	26.47	32.14
Bra033960.1-P	Field mustard	mitochondrion	26.47	32.14
AT1G25240.2	Thale cress	mitochondrion	27.38	32.1
AT1G68110.1	Thale cress	mitochondrion	25.57	29.82
AT1G14686.1	Thale cress	cytosol	22.85	29.79
VIT_01s0011g06370.t01	Wine grape	mitochondrion	25.79	29.61
AT2G01920.1	Thale cress	mitochondrion	20.81	29.49
KRH42490	Soybean	cytosol	26.92	29.46
CDY01884	Canola	mitochondrion	23.76	29.41
CDY45281	Canola	cytosol	22.4	28.86
KRH58584	Soybean	mitochondrion	26.02	28.82
Solyc01g005070.2.1	Tomato	mitochondrion	25.79	28.64
PGSC0003DMT400058608	Potato	mitochondrion	25.79	28.5
Bra004282.1-P	Field mustard	mitochondrion	23.08	28.25
CDY41097	Canola	cytosol	21.95	28.2
CDX96047	Canola	mitochondrion	22.85	27.98
Bra026195.1-P	Field mustard	cytosol	22.4	27.81
KRG89239	Soybean	cytosol, mitochondrion	23.08	26.56
PGSC0003DMT400075705	Potato	mitochondrion	23.08	26.02
Solyc04g008350.1.1	Tomato	mitochondrion	22.62	25.45
KRH49763	Soybean	mitochondrion	21.49	24.42
TraesCS7D01G414100.1	Wheat	mitochondrion	20.14	15.67
TraesCS4D01G208100.1	Wheat	cytosol, mitochondrion, plastid	19.46	15.36
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	19.0	14.87
TraesCS3D01G259000.2	Wheat	cytosol	18.55	14.56
TraesCS7D01G476900.2	Wheat	cytosol	19.0	14.51
TraesCS4D01G085400.1	Wheat	mitochondrion	12.67	14.18
TraesCS1D01G036500.1	Wheat	cytosol	19.46	13.92
TraesCS6D01G143700.1	Wheat	cytosol	17.65	13.29
TraesCS1D01G266400.1	Wheat	mitochondrion	19.68	13.14
TraesCS7D01G140200.1	Wheat	cytosol	16.74	13.12
TraesCS6D01G354100.2	Wheat	cytosol	15.61	11.66

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF19
SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:TraesCS5D01G304500	EnsemblPlants:TraesCS5D01G304500.1	SEG:seg	:

Description

No Description!

Coordinates

chr5D:-:399631924..399633252

Molecular Weight (calculated)

48332.9 Da

IEP (calculated)

8.147

GRAVY (calculated)

-0.133

Length

442 amino acids

Sequence
(BLAST)

001: MLQRPRIHLS THISYPSIHR GSVLSYVYVR ACLIEVLDPP IAAQHRVGWR EGATDRSIVP SAMTTARQWW RRAAAAAKDK KSLCLTRAAG ALRSPARVRG
101: GAAELDAAVI RATSHDDRFV DRGAAARVLD LARASSPSPL VWALARRAGR TRCWAVALKA LMLAHRLLLL AQPRAGGRVP FDLADFRDRS SAGLSALVRA
201: YFRFLDARSL FAAEEDDGAG ANGDQDEETR LLDRLSRRQH LLDLLIQIRP YGDGMERQSL VLDAMECAVV EIFDVYGQVR AGIAEYLVAA LGGSAPTTAM
301: PRPRPGETVA TARRRRAMQG VRVLRKEAEQ SALVSSYFEL CRALGVLSAA EFPALERVPD HDIRDLEKLI MAHVEDGGCM VEQDNEAKAL AVPMEDAGVA
401: STAVATKEWM VFDDDAGTGV RQGHFGDYVN PFLTNLTELG DT

Best Arabidopsis Sequence Match ( AT1G25240.2 )
(BLAST)

001: MMKLWKRASG ALKDRKTLFT IGFSRKTSFR NPDLDSAIIH ATSHDDSSVD YHNAHRVYKW IRSSPANLKP LVHALSSRVN RTRSWIVALK ALMLVHGVLC
101: CKVTSLQEIR RLPFDLSDFS DGHSRPSKTW GFNAFIRAYF SFLDQYSFFL SDQIRRRHKK PQLDSVNQEL ERIEKLQSLL HMLLQIRPMA DNMKKTLILE
201: AMDCVVIEIF DIYGRICSAI AKLLIKIHPA AGKAEAVIAL KIVKKATSQG EDLALYFEFC KEFGVSNAHD IPKFVTIPEE DIKAIEKVIN GVEEEEVKKK
301: EDEVEEEKSI ILVERPELQT IITDKWEIFE DDFCFTCKDI KETDQHRKFN MDPSPLPLIV IDEPVYFTHT LPDLITF

Arabidopsis Description

ENTH/VHS/GAT family protein [Source:TAIR;Acc:AT1G25240]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.