CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60368	Canola	mitochondrion	97.88	97.88
AT1G25240.2	Thale cress	mitochondrion	88.89	89.12
CDY64692	Canola	mitochondrion	86.51	86.28
CDY03862	Canola	mitochondrion	85.19	84.51
CDY12691	Canola	mitochondrion	62.17	64.56
CDX81471	Canola	mitochondrion	62.43	64.13
CDY01884	Canola	mitochondrion	58.47	61.9
CDX96047	Canola	mitochondrion	58.73	61.5
VIT_01s0011g06370.t01	Wine grape	mitochondrion	49.47	48.57
Solyc01g005070.2.1	Tomato	mitochondrion	46.03	43.72
PGSC0003DMT400058608	Potato	mitochondrion	46.03	43.5
KRH58584	Soybean	mitochondrion	45.5	43.11
CDY45281	Canola	cytosol	37.57	41.4
Solyc04g008350.1.1	Tomato	mitochondrion	42.86	41.22
KRH42490	Soybean	cytosol	43.92	41.09
CDY41097	Canola	cytosol	37.3	40.99
PGSC0003DMT400075705	Potato	mitochondrion	42.33	40.82
KRG89239	Soybean	cytosol, mitochondrion	41.27	40.62
KRH49763	Soybean	mitochondrion	41.27	40.1
Zm00001d049990_P001	Maize	mitochondrion	37.57	36.6
EES13983	Sorghum	mitochondrion	38.62	36.32
Os08t0467300-01	Rice	mitochondrion	37.3	35.61
GSMUA_Achr7P18620_001	Banana	mitochondrion	36.24	35.31
TraesCS5B01G296700.1	Wheat	mitochondrion	33.33	32.98
TraesCS5A01G297400.1	Wheat	mitochondrion	32.8	32.89
Zm00001d005869_P001	Maize	mitochondrion	33.86	32.16
GSMUA_Achr8P22890_001	Banana	mitochondrion	33.6	31.99
GSMUA_Achr3P20230_001	Banana	mitochondrion	27.51	31.42
EER96828	Sorghum	mitochondrion	33.33	31.34
GSMUA_Achr7P02390_001	Banana	cytosol	33.07	30.05
Zm00001d031760_P001	Maize	mitochondrion	36.77	28.25
HORVU7Hr1G089710.1	Barley	mitochondrion	13.23	28.25
TraesCS5D01G304500.1	Wheat	mitochondrion	32.8	28.05
HORVU5Hr1G078270.1	Barley	cytosol	32.54	27.89
CDY42239	Canola	cytosol	19.31	21.66
CDY41768	Canola	cytosol, mitochondrion	19.84	18.84
CDX93766	Canola	mitochondrion	18.25	18.6
CDY50184	Canola	mitochondrion	17.99	18.48
CDY71126	Canola	cytosol, mitochondrion	20.37	18.08
CDY35361	Canola	cytosol	26.98	17.26
CDX76976	Canola	cytosol	26.98	17.2
CDY11530	Canola	cytosol	26.19	17.07
CDY47927	Canola	cytosol	22.75	17.03
CDX68831	Canola	cytosol	26.45	16.92
CDX75232	Canola	cytosol	26.45	16.86
CDY18283	Canola	cytosol, nucleus, peroxisome	20.37	16.04
CDY52732	Canola	cytosol	23.55	15.21
CDY04095	Canola	cytosol	22.75	15.06
CDY38276	Canola	cytosol	23.55	15.03
CDY12401	Canola	cytosol, mitochondrion	21.43	15.0
CDY48813	Canola	cytosol	23.02	14.92
CDY17459	Canola	cytosol	22.49	14.91
CDY17660	Canola	cytosol	22.49	14.89
CDY36239	Canola	cytosol	22.49	14.89
CDY15531	Canola	cytosol, golgi, nucleus	23.81	14.75
CDY09433	Canola	cytosol, mitochondrion	22.49	14.73
CDY32494	Canola	mitochondrion	22.22	14.69
CDX94400	Canola	cytosol	23.02	14.6
CDY15448	Canola	mitochondrion	21.96	14.51
CDX89382	Canola	cytosol	22.49	14.14
CDY21904	Canola	mitochondrion	21.69	13.69
CDY22070	Canola	mitochondrion	21.69	13.62
CDY53396	Canola	cytosol	21.43	13.61
CDX86594	Canola	cytosol, golgi, nucleus	23.28	13.54
CDY45299	Canola	mitochondrion	23.55	12.94
CDY53525	Canola	cytosol, mitochondrion	23.28	12.63
CDX76760	Canola	cytosol	14.81	11.99
CDX76977	Canola	cytosol	15.87	11.49
CDX89917	Canola	cytosol	13.23	10.66
CDY18145	Canola	cytosol	12.96	10.52
CDX86691	Canola	cytosol, mitochondrion	22.49	8.41
CDY37444	Canola	nucleus	2.38	3.2

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	GO:A0A078IYC5	UniProt:A0A078IYC5	InterPro:ANTH_dom
EnsemblPlants:CDY57160	ProteinID:CDY57160	ProteinID:CDY57160.1	InterPro:Clathrin_AP_dom2	ncoils:Coil	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSBRNA2T00020595001
InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF19	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0004EF23D1	SEG:seg

Description

BnaC05g50410DBnaC05g50410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYC5]

Coordinates

chrLK033550:+:32674..33810

Molecular Weight (calculated)

43512.5 Da

IEP (calculated)

6.444

GRAVY (calculated)

-0.231

Length

378 amino acids

Sequence
(BLAST)

001: MMKLWKRASG ALKDRKSLFS ISFSRKTSFR NPDLDSAIIH ATSHDDLSVD YHNAHRVYKW VRSSPANLKP LVHALSSRVN RTRSWIVAVK ALMLVHGVLC
101: CKVTSLQEIR RLPFDLSDFS DGHSRPSKTW GFNAFIRAYF SFLDQYAFFF SEQIRGRGKK TQEDSVDQEL ERIQKLQSLL HMLLQIRPMA ENMKKTLILE
201: AMDCVVLEIF DVYGRICSAI AKLLIKIQPG AEKAEAVMAL KVVKKATSQG GDLALYFEFC KEFGVSNAHD IPKFVRIPEE DIEAIEKAIN GVEEKEETKD
301: EQEEVVEEKS IILVERPEFK TIITDKWEVF EDDLCFTCKD IKETDQHREY NVDPSLLPLI VIDEPVYFTH TLPDLITF

Best Arabidopsis Sequence Match ( AT1G25240.2 )
(BLAST)

001: MMKLWKRASG ALKDRKTLFT IGFSRKTSFR NPDLDSAIIH ATSHDDSSVD YHNAHRVYKW IRSSPANLKP LVHALSSRVN RTRSWIVALK ALMLVHGVLC
101: CKVTSLQEIR RLPFDLSDFS DGHSRPSKTW GFNAFIRAYF SFLDQYSFFL SDQIRRRHKK PQLDSVNQEL ERIEKLQSLL HMLLQIRPMA DNMKKTLILE
201: AMDCVVIEIF DIYGRICSAI AKLLIKIHPA AGKAEAVIAL KIVKKATSQG EDLALYFEFC KEFGVSNAHD IPKFVTIPEE DIKAIEKVIN GVEEEEVKKK
301: EDEVEEEKSI ILVERPELQT IITDKWEIFE DDFCFTCKDI KETDQHRKFN MDPSPLPLIV IDEPVYFTHT LPDLITF

Arabidopsis Description

ENTH/VHS/GAT family protein [Source:TAIR;Acc:AT1G25240]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.