Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35361 | Canola | cytosol | 98.31 | 98.65 |
| CDY11530 | Canola | cytosol | 89.04 | 91.03 |
| CDX76977 | Canola | cytosol | 76.39 | 86.78 |
| CDX68831 | Canola | cytosol | 85.33 | 85.62 |
| CDX75232 | Canola | cytosol | 85.33 | 85.33 |
| AT2G25430.1 | Thale cress | cytosol | 93.76 | 85.15 |
| CDX76760 | Canola | cytosol | 65.09 | 82.66 |
| KRH52429 | Soybean | endoplasmic reticulum | 81.28 | 75.19 |
| KRH61760 | Soybean | mitochondrion | 80.78 | 73.47 |
| KRH05593 | Soybean | cytosol | 10.62 | 73.26 |
| VIT_04s0008g05540.t01 | Wine grape | cytosol | 78.92 | 70.59 |
| PGSC0003DMT400040963 | Potato | cytosol | 76.22 | 70.51 |
| PGSC0003DMT400035762 | Potato | cytosol | 75.38 | 69.95 |
| Solyc08g059660.1.1 | Tomato | cytosol | 74.7 | 69.65 |
| TraesCS4D01G208100.1 | Wheat | cytosol, mitochondrion, plastid | 65.77 | 69.64 |
| Solyc06g011450.1.1 | Tomato | cytosol | 70.83 | 68.4 |
| Zm00001d030399_P001 | Maize | cytosol | 40.3 | 68.29 |
| Zm00001d046121_P001 | Maize | cytosol | 41.65 | 68.04 |
| Os03t0275500-01 | Rice | plasma membrane | 70.83 | 64.52 |
| TraesCS4B01G207200.1 | Wheat | cytosol, mitochondrion, plastid | 69.31 | 64.42 |
| Zm00001d047804_P001 | Maize | plasma membrane | 68.8 | 64.35 |
| EER92480 | Sorghum | cytosol, mitochondrion, plastid | 69.81 | 64.19 |
| TraesCS4A01G097200.1 | Wheat | cytosol, mitochondrion, plastid | 68.8 | 63.95 |
| GSMUA_Achr9P03950_001 | Banana | cytosol, mitochondrion, plastid | 56.66 | 63.76 |
| Zm00001d028620_P001 | Maize | plasma membrane | 68.47 | 63.54 |
| HORVU4Hr1G059660.3 | Barley | cytosol, mitochondrion, plastid | 69.14 | 63.47 |
| GSMUA_Achr11P... | Banana | cytosol | 45.36 | 58.99 |
| GSMUA_Achr6P33420_001 | Banana | cytosol, mitochondrion, plastid | 57.0 | 53.48 |
| Os05t0112101-01 | Rice | plasma membrane | 52.11 | 53.18 |
| TraesCS1A01G035100.1 | Wheat | cytosol | 54.47 | 52.44 |
| TraesCS1D01G036500.1 | Wheat | cytosol | 54.47 | 52.27 |
| TraesCS1B01G044800.1 | Wheat | cytosol | 54.3 | 52.1 |
| HORVU1Hr1G005290.1 | Barley | cytosol | 53.63 | 51.46 |
| Zm00001d035652_P001 | Maize | cytosol | 48.74 | 48.41 |
| EES18894 | Sorghum | cytosol | 50.42 | 47.99 |
| CDY15448 | Canola | mitochondrion | 45.19 | 46.85 |
| CDY32494 | Canola | mitochondrion | 44.35 | 45.98 |
| CDY21904 | Canola | mitochondrion | 45.03 | 44.57 |
| CDY22070 | Canola | mitochondrion | 45.03 | 44.35 |
| CDX89917 | Canola | cytosol | 33.05 | 41.79 |
| CDY18145 | Canola | cytosol | 32.72 | 41.63 |
| CDY37444 | Canola | nucleus | 18.89 | 39.86 |
| CDY42239 | Canola | cytosol | 19.9 | 35.01 |
| CDY18283 | Canola | cytosol, nucleus, peroxisome | 26.98 | 33.33 |
| CDY41768 | Canola | cytosol, mitochondrion | 22.09 | 32.91 |
| CDY71126 | Canola | cytosol, mitochondrion | 23.44 | 32.63 |
| CDY52732 | Canola | cytosol | 29.85 | 30.26 |
| CDY53396 | Canola | cytosol | 30.35 | 30.25 |
| CDY15531 | Canola | cytosol, golgi, nucleus | 31.03 | 30.16 |
| CDY12401 | Canola | cytosol, mitochondrion | 27.32 | 30.0 |
| CDY38276 | Canola | cytosol | 29.85 | 29.9 |
| CDY17660 | Canola | cytosol | 28.67 | 29.77 |
| CDY09433 | Canola | cytosol, mitochondrion | 28.84 | 29.64 |
| CDY04095 | Canola | cytosol | 28.5 | 29.6 |
| CDY36239 | Canola | cytosol | 28.33 | 29.42 |
| CDY47927 | Canola | cytosol | 24.96 | 29.31 |
| CDY17459 | Canola | cytosol | 28.16 | 29.3 |
| CDY48813 | Canola | cytosol | 28.67 | 29.16 |
| CDX89382 | Canola | cytosol | 29.01 | 28.62 |
| CDX94400 | Canola | cytosol | 28.67 | 28.52 |
| CDX86594 | Canola | cytosol, golgi, nucleus | 29.85 | 27.23 |
| CDY03862 | Canola | mitochondrion | 17.37 | 27.03 |
| CDY57160 | Canola | mitochondrion | 17.2 | 26.98 |
| CDY64692 | Canola | mitochondrion | 17.2 | 26.91 |
| CDY60368 | Canola | mitochondrion | 17.03 | 26.72 |
| CDX93766 | Canola | mitochondrion | 16.53 | 26.42 |
| CDY50184 | Canola | mitochondrion | 16.36 | 26.36 |
| CDX86691 | Canola | cytosol, mitochondrion | 44.52 | 26.11 |
| CDY12691 | Canola | mitochondrion | 15.35 | 25.0 |
| CDX81471 | Canola | mitochondrion | 15.51 | 25.0 |
| CDY53525 | Canola | cytosol, mitochondrion | 29.17 | 24.82 |
| CDY45299 | Canola | mitochondrion | 28.67 | 24.71 |
| CDY01884 | Canola | mitochondrion | 14.67 | 24.37 |
| CDY41097 | Canola | cytosol | 14.0 | 24.13 |
| CDY45281 | Canola | cytosol | 13.83 | 23.91 |
| CDX96047 | Canola | mitochondrion | 14.33 | 23.55 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:22.1.4.6 | MapMan:22.1.6.2 | GO:A0A078CIE8 | InterPro:ANTH_dom |
| EnsemblPlants:CDX76976 | ProteinID:CDX76976 | ProteinID:CDX76976.1 | InterPro:Clathrin_AP_dom2 | InterPro:ENTH | InterPro:ENTH_VHS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0030136 | GO:GO:0030276 | GO:GO:0048268 | EnsemblPlantsGene:GSBRNA2T00127529001 | InterPro:IPR008942 |
| InterPro:IPR013809 | InterPro:IPR014712 | PFAM:PF07651 | PFscan:PS50942 | PANTHER:PTHR22951 | PANTHER:PTHR22951:SF13 |
| SMART:SM00273 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | UniParc:UPI0004EF3165 | SEG:seg | : |
Description
BnaC04g37710D
Coordinates
chrLK031809:+:86866..89342
Molecular Weight (calculated)
65421.7 Da
IEP (calculated)
4.969
GRAVY (calculated)
-0.474
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSIRKAIG AVKDQTSIGI AKVASNTAPD LEVAIVKATS HDDDPASEKY IREILNLTSL SRGYILACVT SVSRRLGKTR DWVVALKALM LVHRLLNEGD
101: PLFQEEILHS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAFYLDQRLE LALFERKSGG GGGNMNEMGG GRDEKKAVTP LREMTPERIF GKMGHLQRLL
201: DRFLTLRPTG LAKNSRMILI ALYPVVRESF KLYADICEVL AVLLDKFFDM EYTDCVKAFD AYASAAKQID ELIAFYNWCK ETGVARSSEY PEVQRITSKL
301: LETLEEFVRD RAKRGKSPER KEIEAPPPPP VAEEEEAEPD MNEIKALPPP ENYTPPPQPE PEPEKPQYTE DLVNLREDGV TGDDQGNKFA LALFAGPPGS
401: NGKWEAFPSD GVTSAWQNPA AEPGKADWEL ALVETASNLE KQTAALGGGF DSLLLNGMYD QGAVRQHVST SQLTGGSASS VALPLPGKTN TQVLALPAPD
501: GTVEKVNQDP FAASLTIPPP SYVQMAEMEK KQYLLSQEQQ LWQQYQREGM RGQASLAKMN NTGPVPGGMP YGMPPVNGMG PPPPTGYYYN NPY
101: PLFQEEILHS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAFYLDQRLE LALFERKSGG GGGNMNEMGG GRDEKKAVTP LREMTPERIF GKMGHLQRLL
201: DRFLTLRPTG LAKNSRMILI ALYPVVRESF KLYADICEVL AVLLDKFFDM EYTDCVKAFD AYASAAKQID ELIAFYNWCK ETGVARSSEY PEVQRITSKL
301: LETLEEFVRD RAKRGKSPER KEIEAPPPPP VAEEEEAEPD MNEIKALPPP ENYTPPPQPE PEPEKPQYTE DLVNLREDGV TGDDQGNKFA LALFAGPPGS
401: NGKWEAFPSD GVTSAWQNPA AEPGKADWEL ALVETASNLE KQTAALGGGF DSLLLNGMYD QGAVRQHVST SQLTGGSASS VALPLPGKTN TQVLALPAPD
501: GTVEKVNQDP FAASLTIPPP SYVQMAEMEK KQYLLSQEQQ LWQQYQREGM RGQASLAKMN NTGPVPGGMP YGMPPVNGMG PPPPTGYYYN NPY
001: MALSMRKAIG VVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDQSSDKY IREILSLTSL SRGYVHACVT SVSRRLKKTR DWIVALKALM LVHRLLNEGD
101: PLFQEEILYA TRRGTRILNM SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERRGRN GGGSSSSHQS NGDDGYNRSR DDFRSPPPRT YDYETGNGFG
201: MPKRSRSFGD VNEIGAREEK KSVTPLREMT PERIFGKMGH LQRLLDRFLS CRPTGLAKNS RMILIAMYPV VKESFRLYAD ICEVLAVLLD KFFDMEYTDC
301: VKAFDAYASA AKQIDELIAF YHWCKDTGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRA KSPERKEIEA PPAPAPPVEE PVDMNEIKAL PPPENHTPPP
401: PPAPEPKPQQ PQVTDDLVNL REDDVSGDDQ GNKFALALFA GPPANNGKWE AFSSDNNVTS AWQNPAAELG KADWELALVE TASNLEHQKA AMGGGLDPLL
501: LNGMYDQGAV RQHVSTSELT GGSSSSVALP LPGKVNSHIL ALPAPDGTVQ KVNQDPFAAS LTIPPPSYVQ MAEMDKKQYL LTQEQQLWQQ YQQEGMRGQA
601: SLAKMNTAQT AMPYGMPPVN GMGPSPMGYY YNNPY
101: PLFQEEILYA TRRGTRILNM SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERRGRN GGGSSSSHQS NGDDGYNRSR DDFRSPPPRT YDYETGNGFG
201: MPKRSRSFGD VNEIGAREEK KSVTPLREMT PERIFGKMGH LQRLLDRFLS CRPTGLAKNS RMILIAMYPV VKESFRLYAD ICEVLAVLLD KFFDMEYTDC
301: VKAFDAYASA AKQIDELIAF YHWCKDTGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRA KSPERKEIEA PPAPAPPVEE PVDMNEIKAL PPPENHTPPP
401: PPAPEPKPQQ PQVTDDLVNL REDDVSGDDQ GNKFALALFA GPPANNGKWE AFSSDNNVTS AWQNPAAELG KADWELALVE TASNLEHQKA AMGGGLDPLL
501: LNGMYDQGAV RQHVSTSELT GGSSSSVALP LPGKVNSHIL ALPAPDGTVQ KVNQDPFAAS LTIPPPSYVQ MAEMDKKQYL LTQEQQLWQQ YQQEGMRGQA
601: SLAKMNTAQT AMPYGMPPVN GMGPSPMGYY YNNPY
Arabidopsis Description
Probable clathrin assembly protein At4g32285 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.