Factsheet for HORVU1Hr1G005290.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G035100.1	Wheat	cytosol	90.94	91.23
TraesCS1D01G036500.1	Wheat	cytosol	91.1	91.1
TraesCS1B01G044800.1	Wheat	cytosol	90.78	90.78
Os05t0112101-01	Rice	plasma membrane	66.02	70.22
Zm00001d035652_P001	Maize	cytosol	61.0	63.15
EES18894	Sorghum	cytosol	63.43	62.92
CDY35361	Canola	cytosol	51.46	53.81
CDX76976	Canola	cytosol	51.46	53.63
CDY11530	Canola	cytosol	50.0	53.28
CDX68831	Canola	cytosol	50.65	52.96
CDX75232	Canola	cytosol	50.65	52.78
PGSC0003DMT400079380	Potato	cytosol, mitochondrion, plastid	51.29	51.46
HORVU4Hr1G059660.3	Barley	cytosol, mitochondrion, plastid	53.72	51.39
KRH52429	Soybean	endoplasmic reticulum	53.24	51.33
Solyc07g008060.1.1	Tomato	cytosol	50.49	50.81
Bra011333.1-P	Field mustard	cytosol	51.46	50.72
Bra007800.1-P	Field mustard	cytosol	50.16	50.57
GSMUA_Achr9P03950_001	Banana	cytosol, mitochondrion, plastid	43.04	50.47
VIT_11s0016g05480.t01	Wine grape	cytosol	51.62	50.39
KRH61760	Soybean	mitochondrion	53.07	50.31
PGSC0003DMT400035762	Potato	cytosol	51.62	49.92
GSMUA_Achr11P...	Banana	cytosol	36.73	49.78
Bra034252.1-P	Field mustard	cytosol	52.27	49.77
PGSC0003DMT400040963	Potato	cytosol	51.62	49.77
AT4G32285.2	Thale cress	cytosol	51.13	49.76
Solyc08g059660.1.1	Tomato	cytosol	50.97	49.53
CDX76977	Canola	cytosol	41.42	49.04
VIT_04s0008g05540.t01	Wine grape	cytosol	52.27	48.72
AT2G25430.1	Thale cress	cytosol	51.46	48.7
Solyc06g011450.1.1	Tomato	cytosol	48.38	48.7
CDX76760	Canola	cytosol	36.73	48.61
KRH20132	Soybean	cytosol	47.73	48.2
GSMUA_Achr6P33420_001	Banana	cytosol, mitochondrion, plastid	40.45	39.56
KRH05593	Soybean	cytosol	5.5	39.53
HORVU0Hr1G000720.3	Barley	cytosol	38.19	38.94
HORVU1Hr1G065590.1	Barley	cytosol	38.03	38.78
HORVU7Hr1G097510.7	Barley	mitochondrion	23.46	28.38
HORVU7Hr1G109970.5	Barley	cytosol	26.05	28.15
HORVU7Hr1G028590.1	Barley	cytosol	24.92	27.26
HORVU6Hr1G087330.4	Barley	cytosol	24.27	25.77
HORVU1Hr1G078340.3	Barley	plastid	25.89	25.28
HORVU6Hr1G030980.1	Barley	cytosol	24.6	24.56
HORVU4Hr1G015050.1	Barley	mitochondrion	12.14	18.99
HORVU5Hr1G078270.1	Barley	cytosol	13.27	18.59
HORVU7Hr1G089710.1	Barley	mitochondrion	4.85	16.95

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	UniProt:A0A287EIU6	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2
InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543
GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268
EnsemblPlantsGene:HORVU1Hr1G005290	EnsemblPlants:HORVU1Hr1G005290.1	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651
PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF23	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009
UniParc:UPI000B4754A7	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:11525796..11528563

Molecular Weight (calculated)

66037.9 Da

IEP (calculated)

6.621

GRAVY (calculated)

-0.224

Length

618 amino acids

Sequence
(BLAST)

001: MSIRKALGAV KDQATIGIAK VSSAAAADLD VAVVRATAHD DGPPDERHVQ EVLRLTSGSS RAHVAACVAT VSRRLARTRD YVVAAKCLAL LHRLVADGDP
101: HFRHELARPA ARRAGSVLAA LSGFRDEAHS ASWDHSAFVR AYALYLDDRV RFLLALLPAP RTVRFADHDG YGYGYGRAAG GGEAPPPDMT VSVHDMDVEG
201: LLARGLQLRQ LIDRFLACRP TGAARRSRVV LATLWPVVKE SARLYEDVAV VLAVLLDRFF DMEYPDCVRA FEAHVSTARL VDDLLAFYSW CDDAGVARSS
301: DLPNVKPIDH KLLETLEQFV RERGRAGQSS SPPPRQLQHA VQEASRSEDE HRHAEYHHMN GIKALPAPEH INAATVARPR PAQASVPPVA RAPEDQTSDL
401: VDLRESAAAA DEQGNKLALA LFSEAPSQSA NGSWVAFPSD DGAPKETTTS AWQTPAAEPG KADWELALVE TASNLSKQTA ALGGGMDPLL LHGMYDQGAV
501: RHHARAQAAS GSASSVALPG THNILALPGP DGVAGGDPFA ASLAVPPPSY VQMAEMERKQ ELLAQEQRMW AQYRQGGMQG QAGLNGVAVG GGGSAFASNT
601: SVPMPMPMAY HGAGAYYY

Best Arabidopsis Sequence Match ( AT4G32285.2 )
(BLAST)

001: MALSMRKAIG VVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDQSSDKY IREILSLTSL SRGYVHACVT SVSRRLKKTR DWIVALKALM LVHRLLNEGD
101: PLFQEEILYA TRRGTRILNM SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERRGRN GGGSSSSHQS NGDDGYNRSR DDFRSPPPRT YDYETGNGFG
201: MPKRSRSFGD VNEIGAREEK KSVTPLREMT PERIFGKMGH LQRLLDRFLS CRPTGLAKNS RMILIAMYPV VKESFRLYAD ICEVLAVLLD KFFDMEYTDC
301: VKAFDAYASA AKQIDELIAF YHWCKDTGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRA KSPERKEIEA PPAPAPPVEE PVDMNEIKAL PPPENHTPPP
401: PPAPEPKPQQ PQVTDDLVNL REDDVSGDDQ GNKFALALFA GPPANNGKWE AFSSDNNVTS AWQNPAAELG KADWELALVE TASNLEHQKA AMGGGLDPLL
501: LNGMYDQGAV RQHVSTSELT GGSSSSVALP LPGKVNSHIL ALPAPDGTVQ KVNQDPFAAS LTIPPPSYVQ MAEMDKKQYL LTQEQQLWQQ YQQEGMRGQA
601: SLAKMNTAQT AMPYGMPPVN GMGPSPMGYY YNNPY

Arabidopsis Description

Probable clathrin assembly protein At4g32285 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.