Factsheet for Bra034252.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35361	Canola	cytosol	90.45	99.32
AT2G25430.1	Thale cress	cytosol	91.53	90.96
Bra007800.1-P	Field mustard	cytosol	84.75	89.72
Bra011333.1-P	Field mustard	cytosol	81.2	84.05
KRH52429	Soybean	endoplasmic reticulum	77.04	78.0
KRH61760	Soybean	mitochondrion	76.58	76.23
VIT_04s0008g05540.t01	Wine grape	cytosol	74.88	73.3
KRH05593	Soybean	cytosol	9.71	73.26
PGSC0003DMT400040963	Potato	cytosol	71.49	72.39
PGSC0003DMT400035762	Potato	cytosol	70.72	71.83
Solyc08g059660.1.1	Tomato	cytosol	70.11	71.54
Solyc06g011450.1.1	Tomato	cytosol	66.41	70.2
TraesCS4D01G208100.1	Wheat	cytosol, mitochondrion, plastid	59.94	69.46
Zm00001d030399_P001	Maize	cytosol	36.83	68.29
Zm00001d046121_P001	Maize	cytosol	38.06	68.04
Zm00001d047804_P001	Maize	plasma membrane	64.56	66.09
Os03t0275500-01	Rice	plasma membrane	66.1	65.9
EER92480	Sorghum	cytosol, mitochondrion, plastid	65.49	65.89
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	64.71	65.83
TraesCS4A01G097200.1	Wheat	cytosol, mitochondrion, plastid	64.25	65.36
Zm00001d028620_P001	Maize	plasma membrane	64.25	65.26
HORVU4Hr1G059660.3	Barley	cytosol, mitochondrion, plastid	64.56	64.86
GSMUA_Achr9P03950_001	Banana	cytosol, mitochondrion, plastid	52.54	64.71
GSMUA_Achr11P...	Banana	cytosol	42.84	60.96
GSMUA_Achr6P33420_001	Banana	cytosol, mitochondrion, plastid	52.39	53.8
Os05t0112101-01	Rice	plasma membrane	48.07	53.7
TraesCS1A01G035100.1	Wheat	cytosol	50.54	53.25
TraesCS1D01G036500.1	Wheat	cytosol	50.69	53.24
TraesCS1B01G044800.1	Wheat	cytosol	50.54	53.07
HORVU1Hr1G005290.1	Barley	cytosol	49.77	52.27
Zm00001d035652_P001	Maize	cytosol	44.68	48.58
EES18894	Sorghum	cytosol	46.53	48.48
Bra030518.1-P	Field mustard	mitochondrion	41.6	45.76
Bra032561.1-P	Field mustard	mitochondrion	41.76	45.39
Bra036250.1-P	Field mustard	mitochondrion	41.45	44.76
Bra033369.1-P	Field mustard	cytosol	30.35	42.0
Bra002750.1-P	Field mustard	cytosol	27.58	30.19
Bra038937.1-P	Field mustard	mitochondrion	25.42	30.0
Bra020460.1-P	Field mustard	cytosol	27.43	29.97
Bra024871.1-P	Field mustard	cytosol	26.35	29.95
Bra017439.1-P	Field mustard	cytosol	26.19	29.77
Bra015381.1-P	Field mustard	cytosol	28.66	29.2
Bra013934.1-P	Field mustard	cytosol	26.81	28.95
Bra030600.1-P	Field mustard	cytosol, golgi, nucleus	26.96	27.13
Bra024772.1-P	Field mustard	mitochondrion	15.72	27.06
Bra012491.1-P	Field mustard	mitochondrion	15.56	26.72
Bra028000.1-P	Field mustard	mitochondrion	15.25	26.68
Bra033960.1-P	Field mustard	mitochondrion	14.02	25.0
Bra004282.1-P	Field mustard	mitochondrion	13.41	24.1
Bra026647.1-P	Field mustard	cytosol	26.19	23.61
Bra026195.1-P	Field mustard	cytosol	12.94	23.6
Bra026179.1-P	Field mustard	cytosol, mitochondrion	26.5	22.45

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.4.6	InterPro:ANTH_dom	EnsemblPlantsGene:Bra034252	EnsemblPlants:Bra034252.1
EnsemblPlants:Bra034252.1-P	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	UniProt:M4EZK9
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF13	SMART:SM00273	SUPFAM:SSF48464
SUPFAM:SSF89009	UniParc:UPI0002544EF8	SEG:seg	:	:	:

Description

AT2G25430 (E=9e-271) | epsin N-terminal homology (ENTH) domain-containing protein

Coordinates

chrA04:+:11410270..11412219

Molecular Weight (calculated)

71163.0 Da

IEP (calculated)

5.117

GRAVY (calculated)

-0.552

Length

649 amino acids

Sequence
(BLAST)

001: MAPSIRKAIG AVKDQTSIGI AKVASNTAPD LEVAIVKATS HDDDPASEKY IREILNLTSL SRGYILACVT SVSRRLGKTR DWVVALKALM LVHRLLNEGD
101: PLFQEEILHS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAFYLDQRLE LALFERKSGG GGGGGGGSSS YHSNGDDRYS RGRDDFRSPP PRSYDYDNGS
201: GGAYGGGYGG VPKRSRSYGD MNEIGGGRDE KKAVTPLPEM TPERIFGKMG HLQRLLDRFL TLRPTGLAKN SRMILIALYP VVRESFKLYA DICEVLAVLL
301: DKFFDMEYTD CVKAFDAYAS AAKQIDELIA FYNWCKETGV ARSSEYPEVQ RITSKLLETL EEFVRDRAKR GKSPERKEIE APPPPPPPVA EEEEPDMNEI
401: KALPPPESYT PPPQPEPEPE KPQYTEDLVN LREDGVTGDD QGNKFALALF AGPPGSNGKW EAFPSDGVTS AWQNPAAEPG KADWELALVE TASNLEKQTA
501: ALGGGFDSLL LNGMYDQGAV RQHVSTTQLT GGSASSVALP LPGKANTQIL ALPAPDGTVE KVNQDPFAAS LTIPPPSYVQ MAEMEKKQYL LSQEQQLWQQ
601: YQREGMRGQA SLAKMNNTGP VPGGMPYGMP PVNGMGPPPP TGYYYNNPY

Best Arabidopsis Sequence Match ( AT2G25430.1 )
(BLAST)

001: MAPSIRKAIG AVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDPASEKY IREILNLTSL SRGYILACVT SVSRRLSKTR DWVVALKALM LVHRLLNEGD
101: PIFQEEILYS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAGYLDQRLE LALFERKSGV SVNSGGNSSH HSNNDDRYGR GRDDFRSPPP RSYDYENGGG
201: GGSDFRGDNN GYGGVPKRSR SYGDMTEMGG GGGGGGRDEK KVVTPLREMT PERIFGKMGH LQRLLDRFLS LRPTGLAKNS RMILIALYPV VRESFKLYAD
301: ICEVLAVLLD KFFDMEYSDC VKAFDAYASA AKQIDELIAF YNWCKETGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRG KSPERKEIEA PPPVVEEEEP
401: EPDMNEIKAL PPPENYTPPP PPEPEPQPEK PQFTEDLVNL REDEVTADDQ GNKFALALFA GPPGNNGKWE AFSSNGVTSA WQNPAAEPGK ADWELALVET
501: TSNLEKQTAA LGGGFDNLLL NGMYDQGMVR QHVSTSQLTG GSASSVALPL PGKTNNQVLA LPAPDGTVEK VNQDPFAASL TIPPPSYVQM AEMEKKQYLL
601: SQEQQLWQQY QRDGMRGQAS LAKMNTGPVP AYGMPPVNGM GPPPTGYYYN NPY

Arabidopsis Description

Putative clathrin assembly protein At2g25430 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF20]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.