Factsheet for Bra013934.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89382	Canola	cytosol	98.67	98.67
CDX94400	Canola	cytosol	96.67	97.48
AT4G25940.1	Thale cress	cytosol	89.68	89.68
Bra002750.1-P	Field mustard	cytosol	80.03	81.11
Bra020460.1-P	Field mustard	cytosol	80.03	80.98
Os06t0661400-01	Rice	cytosol	27.29	65.6
KRH19094	Soybean	cytosol	61.23	64.11
KRH12315	Soybean	cytosol	63.56	64.09
KRH37330	Soybean	cytosol	63.39	63.93
VIT_11s0103g00620.t01	Wine grape	cytosol	62.23	63.28
KRH02791	Soybean	cytosol	60.4	63.24
GSMUA_Achr7P04960_001	Banana	cytosol	57.24	62.55
PGSC0003DMT400036570	Potato	cytosol	58.24	61.08
Solyc02g043810.2.1	Tomato	cytosol	58.57	60.9
GSMUA_Achr1P15690_001	Banana	cytosol	55.91	60.11
GSMUA_Achr3P05590_001	Banana	cytosol	54.58	60.07
GSMUA_Achr4P20660_001	Banana	cytosol	54.24	58.53
EES06356	Sorghum	cytosol	54.08	57.02
Zm00001d015430_P001	Maize	cytosol	53.24	55.46
KXG20534	Sorghum	cytosol, mitochondrion	53.41	55.34
KXG20765	Sorghum	mitochondrion	52.08	55.11
Zm00001d036672_P005	Maize	cytosol	52.58	54.96
Os02t0175700-01	Rice	plasma membrane	52.25	53.86
TraesCS7B01G393800.2	Wheat	cytosol	50.58	53.33
TraesCS6B01G181800.1	Wheat	cytosol	51.08	53.21
Bra024871.1-P	Field mustard	cytosol	50.42	53.06
TraesCS6D01G143700.1	Wheat	cytosol	51.75	52.98
TraesCS7D01G476900.2	Wheat	cytosol	50.92	52.85
TraesCS7A01G490500.2	Wheat	cytosol	50.42	52.79
HORVU7Hr1G109970.5	Barley	cytosol	50.08	52.62
TraesCS6A01G154100.1	Wheat	cytosol	50.92	52.22
Os06t0699800-00	Rice	cytosol	38.1	52.16
TraesCS7D01G414100.1	Wheat	mitochondrion	49.25	52.11
TraesCS7B01G322300.1	Wheat	mitochondrion	48.92	52.04
Bra017439.1-P	Field mustard	cytosol	49.42	52.01
TraesCS7A01G421900.1	Wheat	mitochondrion	49.25	51.93
HORVU7Hr1G097510.7	Barley	mitochondrion	43.09	50.68
HORVU6Hr1G030980.1	Barley	cytosol	51.41	49.92
Bra038937.1-P	Field mustard	mitochondrion	43.26	47.27
TraesCS7B01G430700.2	Wheat	cytosol	10.98	46.15
Bra026647.1-P	Field mustard	cytosol	49.42	41.25
Bra026179.1-P	Field mustard	cytosol, mitochondrion	47.92	37.6
Bra011333.1-P	Field mustard	cytosol	29.45	28.23
Bra034252.1-P	Field mustard	cytosol	28.95	26.81
Bra007800.1-P	Field mustard	cytosol	27.29	26.75
Bra032561.1-P	Field mustard	mitochondrion	25.79	25.96
Bra030518.1-P	Field mustard	mitochondrion	25.46	25.93
Bra036250.1-P	Field mustard	mitochondrion	25.62	25.62
Bra012491.1-P	Field mustard	mitochondrion	15.14	24.07
Bra033960.1-P	Field mustard	mitochondrion	14.31	23.63
Bra024772.1-P	Field mustard	mitochondrion	14.64	23.34
Bra033369.1-P	Field mustard	cytosol	17.8	22.81
Bra028000.1-P	Field mustard	mitochondrion	13.98	22.64
Bra004282.1-P	Field mustard	mitochondrion	13.48	22.44
Bra026195.1-P	Field mustard	cytosol	12.48	21.07
Bra015381.1-P	Field mustard	cytosol	20.47	19.31
Bra030600.1-P	Field mustard	cytosol, golgi, nucleus	19.3	17.98

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	InterPro:ANTH_dom	EnsemblPlantsGene:Bra013934	EnsemblPlants:Bra013934.1
EnsemblPlants:Bra013934.1-P	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	UniProt:M4DBS4
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF56	SMART:SM00273	SUPFAM:SSF48464
SUPFAM:SSF89009	UniParc:UPI0002546BDF	SEG:seg	:	:	:

Description

AT4G25940 (E=4e-255) | epsin N-terminal homology (ENTH) domain-containing protein

Coordinates

chrA01:-:8525005..8527964

Molecular Weight (calculated)

67649.2 Da

IEP (calculated)

4.858

GRAVY (calculated)

-0.637

Length

601 amino acids

Sequence
(BLAST)

001: MATFHSFRKA VGALKDSTTV SIAKVNSEFK DLDVAIVKST NHVESAPKER HIRKIFSATS AIRPRADVAY CIHALAKRLS RTHNWVVAIK VLIVIHRTLR
101: EGDPTFRDEL LNYSHRGHIL RISNFKDDTS PLAWDCSAWI RTYALFLEER LECYRVLKYD IEAERLPKGS GASSKNVDLN ASQTYRTRML SNEELLEQLP
201: ALQQLLFRLT GCKPEGAGYS NYLIQYALAL VLKESFKIYC AINDGIINLV DLFFEMSRHD AVKALNIYKR AGQQAENLAD FYEHCKSLEL ARNFQFPTLR
301: QPPPSFLTTM EEYIKEAPQS GSVQKKLEYH EKGEEEEQDE EEEEQSAQPE EPAETENQNE NTEGDQPLIE EEEEETEQIE EDTKPSFLID TDDLLGLSEI
401: NPKATEIEDR NALALAIYPP GHEAPGPSTS LSLIETGGSG WELALVTPQN NNNNNNIPRP APDTKYAGGF DKLLLDSLYE DDSARRQIQL TNAGYGHGGT
501: ETAGAAPPQN PFEMQQDPFA MSNNIAPPTN VQMAMQQQQQ QQMMMMHQSP YNYSHPHDHH QFSAAGPSPS NPFGDHFLAL PPPPGSSGQM QQQNSHHHML
601: L

Best Arabidopsis Sequence Match ( AT4G25940.1 )
(BLAST)

001: MATFNSFRKA VGAIKDSTTV SIAKVNSEFK DLDVAIVKAT NHVESAPKER HIRRIFSATS VVQPRADVAY CIHALAKRLS KTRNWVVAIK VLIVIHRTLR
101: EGDPTFREEL LNYSHRGHIL RISNFKDDTS PLAWDCSAWI RTYALFLEER LECYRVLKYD IEAERLPKGS GASSKNVDFN ASQTYRTRML SDEELLEQLP
201: ALQQLLYRLI GCQPEGSAYS NYLIQYALAL VLKESFKIYC AINDGIINLV DMFFEMSRHD AVKALNIYKR AGQQAENLAD FYEYCKGLEL ARNFQFPTLR
301: QPPPSFLATM EDYIKEAPQS GSVQKKLEYQ EKEEEEQEEE EAEHSVQPEE PAEADNQKEN SEGDQPLIEE EEEDQEKIEE EDAKPSFLID TDDLLGLNEI
401: NPKAAEIEDR NALALAIYPP GHEAPGPSNI LSLIETGGSG WELALVTPQN NNNNNNPRPA PNTKLAGGFD NLLLDSLYED DSARRQIQLT NAGYGHGGID
501: TTAAPPNPFQ MQQDPFAMSN NIAPPTNVQM AMQQQQQQQM TMMHQSPYNY THPHDYHQNH HHHQFSAGPS PSNPFGDAFL ALPPPPGSAG PQQNNHHHML
601: L

Arabidopsis Description

Putative clathrin assembly protein At4g25940 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.