Factsheet for Zm00001d036672_P005

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20534	Sorghum	cytosol, mitochondrion	92.35	91.55
Os06t0661400-01	Rice	cytosol	38.09	87.6
HORVU7Hr1G109970.5	Barley	cytosol	78.96	79.37
TraesCS7A01G490500.2	Wheat	cytosol	76.7	76.83
TraesCS7B01G393800.2	Wheat	cytosol	76.0	76.67
TraesCS7D01G476900.2	Wheat	cytosol	76.87	76.34
Solyc12g017440.1.1	Tomato	cytosol	35.13	67.56
Zm00001d015430_P001	Maize	cytosol	67.13	66.9
CDY42239	Canola	cytosol	38.61	65.88
GSMUA_Achr7P04960_001	Banana	cytosol	62.78	65.64
GSMUA_Achr1P15690_001	Banana	cytosol	61.04	62.79
GSMUA_Achr4P20660_001	Banana	cytosol	60.52	62.48
KRH02791	Soybean	cytosol	59.13	59.23
KRH19094	Soybean	cytosol	57.91	58.01
VIT_11s0103g00620.t01	Wine grape	cytosol	59.3	57.7
KRH12315	Soybean	cytosol	59.48	57.38
PGSC0003DMT400036570	Potato	cytosol	57.04	57.24
KRH37330	Soybean	cytosol	59.13	57.05
Solyc02g043810.2.1	Tomato	cytosol	57.22	56.92
CDY52732	Canola	cytosol	56.35	55.38
Zm00001d038892_P001	Maize	mitochondrion	53.91	55.06
Bra002750.1-P	Field mustard	cytosol	56.7	54.97
CDY38276	Canola	cytosol	56.52	54.9
CDY47927	Canola	cytosol	47.65	54.26
Bra020460.1-P	Field mustard	cytosol	56.0	54.21
AT5G57200.1	Thale cress	cytosol	55.48	53.98
CDX89382	Canola	cytosol	54.96	52.58
AT4G25940.1	Thale cress	cytosol	54.96	52.58
Bra013934.1-P	Field mustard	cytosol	54.96	52.58
CDX94400	Canola	cytosol	54.43	52.52
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	48.87	48.28
Zm00001d037484_P002	Maize	cytosol, mitochondrion	44.87	46.82
Zm00001d043773_P003	Maize	cytosol	50.43	46.25
Zm00001d052008_P003	Maize	cytosol	41.74	43.4
Zm00001d045154_P002	Maize	mitochondrion	44.0	42.31
Solyc12g017430.1.1	Tomato	nucleus	14.61	39.62
PGSC0003DMT400025029	Potato	nucleus	17.74	35.92
Zm00001d030399_P001	Maize	cytosol	17.91	29.43
Zm00001d046121_P001	Maize	cytosol	18.43	29.2
Zm00001d047804_P001	Maize	plasma membrane	30.61	27.76
Zm00001d028620_P001	Maize	plasma membrane	30.61	27.54
Zm00001d010228_P001	Maize	cytosol	29.04	27.15
Zm00001d035652_P001	Maize	cytosol	28.17	27.14
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	23.83	24.68
Zm00001d005869_P001	Maize	mitochondrion	15.83	22.86
Zm00001d007272_P001	Maize	mitochondrion	14.78	21.52
Zm00001d049002_P001	Maize	mitochondrion	14.96	21.23
Zm00001d049990_P001	Maize	mitochondrion	13.74	20.36
Zm00001d047867_P001	Maize	cytosol	9.74	17.02
Zm00001d031760_P001	Maize	mitochondrion	13.74	16.06

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100284669	MapMan:22.1.6.2	UniProt:A0A1D6LQE1	InterPro:ANTH_dom
ProteinID:AQK81702.1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651
PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF21	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009
UniParc:UPI0002213FEE	EnsemblPlantsGene:Zm00001d036672	EnsemblPlants:Zm00001d036672_P005	EnsemblPlants:Zm00001d036672_T005	SEG:seg	:

Description

Clathrin assembly protein

Coordinates

chr6:-:97225142..97229239

Molecular Weight (calculated)

64827.6 Da

IEP (calculated)

4.972

GRAVY (calculated)

-0.462

Length

575 amino acids

Sequence
(BLAST)

001: MGSGTWRKAY GALKDSTKVG LANFNSEYKD LDIAIVKATN HVECPPKERH FRRILFATSA HRPQADVAYS ICTLARRLSK TKSWIVALKT LIVIHRLLRE
101: GDGTFKEDFL TYSYRGNVLQ IPQFKDDSSP LAWDCSAWVR TYALYLDERL ECFRILKYDV ELDRLLKLPH ASGKAHSRTR SLPLAELLVQ LPALQKLLLR
201: LIYCQPEGAA CTNYLVQYAL ALVLKESFKI YCSINDGIIN LVDMYFEMPK YDAIKALEIY KRAGQQAEKL SNFYDHCKLL ELARTFQFPT LRQPPPSFLV
301: TMEEYIREAP RADTESKSLE NYEENQPSDN EAASPQGAEK PVEDEKYEPA EPEAEPQPSV DPLEEAVEPQ PRATTGNLLN LDEEVNPMIA DLETSNALAL
401: AIVAPGNENK MPTSQDLFAL DKAGWELALV TAPSNHTNQQ VDNQLAGGFD KLLLDSLYED EARRQQIASV TYTGSTAANP FDHNDPFAMS NSFAPPSNVQ
501: LAMMAEQQQY YHAQQQQYYQ IQQQHQMVML PPQTYQQQSQ YSAPSQSGLS NPFGDPFSSL VTMANPPKQS NSNLV

Best Arabidopsis Sequence Match ( AT1G14910.1 )
(BLAST)

001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL

Arabidopsis Description

Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.