Factsheet for Zm00001d009452_P007

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038892_P001	Maize	mitochondrion	85.91	88.81
EES19899	Sorghum	cytosol, mitochondrion, plastid	85.91	88.65
Os05t0549000-01	Rice	plasma membrane	80.24	82.36
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	77.49	79.82
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	77.49	79.82
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	77.15	79.61
HORVU1Hr1G078340.3	Barley	plastid	77.15	70.93
GSMUA_Achr9P21890_001	Banana	cytosol	66.49	69.11
GSMUA_Achr4P13420_001	Banana	cytosol	62.37	67.98
Zm00001d043773_P003	Maize	cytosol	69.76	64.75
KRH42533	Soybean	cytosol	61.68	63.2
KRH58627	Soybean	nucleus	61.68	63.09
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	60.65	62.26
Solyc04g007860.2.1	Tomato	cytosol, plastid	59.79	61.81
PGSC0003DMT400075923	Potato	cytosol	59.62	61.63
KRH38239	Soybean	cytosol	57.56	60.47
CDY17660	Canola	cytosol	57.56	58.67
Bra024871.1-P	Field mustard	cytosol	57.56	58.67
AT2G01600.1	Thale cress	cytosol, mitochondrion	57.39	58.49
CDY36239	Canola	cytosol	57.04	58.14
CDY09433	Canola	cytosol, mitochondrion	56.53	57.02
CDY48813	Canola	cytosol	56.87	56.78
CDY17459	Canola	cytosol	55.5	56.67
CDY04095	Canola	cytosol	55.33	56.39
Bra017439.1-P	Field mustard	cytosol	55.33	56.39
Zm00001d036672_P005	Maize	cytosol	48.28	48.87
Zm00001d015430_P001	Maize	cytosol	48.28	48.7
AT1G14910.1	Thale cress	mitochondrion	54.12	45.52
Bra026647.1-P	Field mustard	cytosol	56.01	45.28
CDY53525	Canola	cytosol, mitochondrion	54.12	45.19
Zm00001d037484_P002	Maize	cytosol, mitochondrion	42.78	45.19
CDY45299	Canola	mitochondrion	53.26	45.06
Zm00001d052008_P003	Maize	cytosol	40.21	42.31
Zm00001d045154_P002	Maize	mitochondrion	43.13	41.97
Bra026179.1-P	Field mustard	cytosol, mitochondrion	53.26	40.47
Zm00001d046121_P001	Maize	cytosol	17.01	27.27
Zm00001d035652_P001	Maize	cytosol	27.32	26.63
Zm00001d030399_P001	Maize	cytosol	15.98	26.57
Zm00001d047804_P001	Maize	plasma membrane	28.87	26.5
Zm00001d028620_P001	Maize	plasma membrane	28.52	25.98
Zm00001d010228_P001	Maize	cytosol	26.63	25.2
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	23.2	24.32
Zm00001d049990_P001	Maize	mitochondrion	15.29	22.94
Zm00001d005869_P001	Maize	mitochondrion	15.12	22.11
Zm00001d031760_P001	Maize	mitochondrion	15.12	17.89
Zm00001d007272_P001	Maize	mitochondrion	11.86	17.47
Zm00001d049002_P001	Maize	mitochondrion	12.03	17.28
Zm00001d047867_P001	Maize	cytosol	9.28	16.41

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	UniProt:A0A1D6FJI7	InterPro:ANTH_dom	ProteinID:AQK91925.1
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF56	SMART:SM00273	SUPFAM:SSF48464
SUPFAM:SSF89009	TMHMM:TMhelix	UniParc:UPI00084409DE	EnsemblPlantsGene:Zm00001d009452	EnsemblPlants:Zm00001d009452_P007	EnsemblPlants:Zm00001d009452_T007
SEG:seg	:	:	:	:	:

Description

Putative clathrin assembly protein

Coordinates

chr8:-:65141869..65150943

Molecular Weight (calculated)

64709.3 Da

IEP (calculated)

5.272

GRAVY (calculated)

-0.264

Length

582 amino acids

Sequence
(BLAST)

001: MASMQSWRKA YGAIKDTTTV SIANLNSDFK DLDVAIVKAT NHVECPPKER HLRRVVAATS ITRPRADVAY CIHALARRLA KTRNWIVALK ALVVIHRLLR
101: EGDPTFREEL LNFTQRGRIL QLSNFKDDSS PIAWDCSAWV RTYGLYLEER LECFRVLKYD VEAERLSKQG QGPEKGHSRT RELDSQDLLE QLPALQQLLY
201: RLVGCRPEGA ANNNYLVQYA LALVSCVFCY VKAIFSRGNT FLHVAVWLTM CTFILYSFLR CQDMMHLKLL KSTEGLANRL FDTFQAGNLS DFYENCRGLE
301: LARNFQFPTL REPPQTFLAT MEDYVKEAPR MVPVREPLEL PERLLLTYKP EESEEILEPA PVEEEKVPVE EPVLVPPVTE VVSPPPKAEV PDTGDLLGLD
401: DTNPAVSAIE ESNALALAIV PTDGASTTGN TAFQDKGFDP TGWELALVTA PSNTTSSTSV GQLGGGLDKL ILESLYDDGA YRQRQQQQLY GSAAPNPFMA
501: NDPFAMSNQV APPPSVQMAA MSQQHQQIPT MMQPNPFGPP MHPQVSMAPA TNNPFLDAGF GAFPAANNGH QQHNPFGSAQ LL

Best Arabidopsis Sequence Match ( AT1G14910.1 )
(BLAST)

001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL

Arabidopsis Description

Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.