Factsheet for Os05t0549000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19899	Sorghum	cytosol, mitochondrion, plastid	90.65	91.13
Zm00001d038892_P001	Maize	mitochondrion	89.59	90.23
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	87.65	87.96
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	87.48	87.94
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	87.48	87.79
Os01t0694900-01	Rice	cytosol	84.3	84.15
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	82.36	80.24
HORVU1Hr1G078340.3	Barley	plastid	88.18	78.99
GSMUA_Achr9P21890_001	Banana	cytosol	76.01	76.96
GSMUA_Achr4P13420_001	Banana	cytosol	71.78	76.22
Os06t0661400-01	Rice	cytosol	31.39	71.2
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	69.66	69.66
KRH42533	Soybean	cytosol	69.66	69.54
KRH58627	Soybean	nucleus	69.49	69.24
PGSC0003DMT400075923	Potato	cytosol	67.9	68.38
Solyc04g007860.2.1	Tomato	cytosol, plastid	67.72	68.21
KRH38239	Soybean	cytosol	64.9	66.43
Bra024871.1-P	Field mustard	cytosol	64.2	63.75
CDY17660	Canola	cytosol	64.2	63.75
AT2G01600.1	Thale cress	cytosol, mitochondrion	63.84	63.4
CDY36239	Canola	cytosol	63.67	63.22
CDY09433	Canola	cytosol, mitochondrion	63.14	62.05
CDY48813	Canola	cytosol	63.67	61.92
Bra017439.1-P	Field mustard	cytosol	62.26	61.82
CDY04095	Canola	cytosol	62.26	61.82
CDY17459	Canola	cytosol	62.08	61.75
Os06t0699800-00	Rice	cytosol	44.97	58.09
Os02t0175700-01	Rice	plasma membrane	56.26	54.72
AT1G14910.1	Thale cress	mitochondrion	61.02	50.0
Os06t0175500-01	Rice	plasma membrane	49.74	49.47
Bra026647.1-P	Field mustard	cytosol	62.43	49.17
CDY45299	Canola	mitochondrion	58.91	48.55
CDY53525	Canola	cytosol, mitochondrion	59.44	48.35
Os02t0803300-01	Rice	cytosol	48.32	48.15
Bra026179.1-P	Field mustard	cytosol, mitochondrion	59.08	43.73
Os03t0275500-01	Rice	plasma membrane	33.51	29.19
Os05t0112101-01	Rice	plasma membrane	29.1	28.4
Os01t0881100-01	Rice	mitochondrion	25.22	27.45
Os05t0426100-00	Rice	cytosol	30.34	25.83
Os08t0467300-01	Rice	mitochondrion	16.05	22.98
Os11t0244600-01	Rice	cytosol	13.05	18.73

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	EntrezGene:4339517	InterPro:ANTH_dom	ProteinID:BAF18146.1
ProteinID:BAS95192.1	InterPro:Clathrin_AP_dom2	ProteinID:EEE64590.1	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043
GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
EnsemblPlantsGene:Os05g0549000	EnsemblPlants:Os05t0549000-01	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF56
UniProt:Q0DG77	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI000037807F	RefSeq:XP_015639435.1
SEG:seg	:	:	:	:	:

Description

Epsin-like, N-terminal domain containing protein. (Os05t0549000-01);Epsin-like, N-terminal domain containing protein. (Os05t0549000-02)

Coordinates

chr5:-:27236656..27243423

Molecular Weight (calculated)

63052.0 Da

IEP (calculated)

5.036

GRAVY (calculated)

-0.417

Length

567 amino acids

Sequence
(BLAST)

001: MAAMQSWRKA YGALKDSTTV SLANLNSDFK DLDVAIVKAT NHVECPPKER HLRKIVAATS IARPRADVAY CIHALSRRLA KTRNWIVALK TLVVIHRLLR
101: EGDPTFREEL LNFAQRGRIL QLSNFKDDSS PIAWDCSAWV RTYGLFLEER LECFRVLKYD VEAERLSKQG QGPEKGHSRT RELESQDLLE QLPALQQLLY
201: RLVGCRPEGA ANNNYLVQYA LALVLKESFK IYCAINDGII NLVDKFFEMP RHEALKALEI YRRAGQQAGS LSDFYENCRG LELARNFQFP TLREPPQTFL
301: VTMEEYVREA PRMVPVREPL ELPERLLLTY KPEEQEEDSV PDPVEEEKPP VEEPVPVPPV TEAVSPPPPP KTKVADTGDL LGLNDPNPSV SAIEESNALA
401: LAIVPADAGA STSSTATWQD KGFDPTGWEL ALVTTPSNTN SSAADSQLGG GFDKLILESL YDQGDYRQRQ QQQLYGSSAP NPFMSNDPFV MSNQVAPPPS
501: VQMAAMSQQH QQIPTMMQAN PFGPPMQPQH VGMGPATNPF LDSGFGPFPM ANNGHQQANP FGGTQLL

Best Arabidopsis Sequence Match ( AT2G01600.1 )
(BLAST)

001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I

Arabidopsis Description

Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.