Factsheet for Bra024871.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17660	Canola	cytosol	99.3	99.3
Bra017439.1-P	Field mustard	cytosol	90.37	90.37
AT2G01600.1	Thale cress	cytosol, mitochondrion	88.62	88.62
KRH42533	Soybean	cytosol	74.43	74.82
KRH58627	Soybean	nucleus	74.26	74.52
Bra026647.1-P	Field mustard	cytosol	91.59	72.64
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	71.1	71.6
Solyc04g007860.2.1	Tomato	cytosol, plastid	69.35	70.34
PGSC0003DMT400075923	Potato	cytosol	69.18	70.16
KRH38239	Soybean	cytosol	67.95	70.04
GSMUA_Achr4P13420_001	Banana	cytosol	60.95	65.17
EES19899	Sorghum	cytosol, mitochondrion, plastid	64.1	64.89
Zm00001d038892_P001	Maize	mitochondrion	63.92	64.83
GSMUA_Achr9P21890_001	Banana	cytosol	63.05	64.29
Os05t0549000-01	Rice	plasma membrane	63.75	64.2
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	62.52	63.19
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	62.35	63.12
Os01t0694900-01	Rice	cytosol	62.7	63.03
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	62.35	63.01
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	61.12	62.1
EES01312	Sorghum	cytosol	61.12	61.99
TraesCS3A01G258900.1	Wheat	cytosol	60.6	61.9
TraesCS3D01G259000.2	Wheat	cytosol	60.6	61.46
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	58.67	57.56
HORVU1Hr1G078340.3	Barley	plastid	62.52	56.4
Zm00001d043773_P003	Maize	cytosol	59.19	53.91
Bra026179.1-P	Field mustard	cytosol, mitochondrion	70.93	52.87
Bra002750.1-P	Field mustard	cytosol	54.82	52.78
Bra020460.1-P	Field mustard	cytosol	54.47	52.36
Bra013934.1-P	Field mustard	cytosol	53.06	50.42
Bra038937.1-P	Field mustard	mitochondrion	45.71	47.45
Bra030518.1-P	Field mustard	mitochondrion	29.42	28.47
Bra032561.1-P	Field mustard	mitochondrion	29.25	27.97
Bra036250.1-P	Field mustard	mitochondrion	29.07	27.62
Bra007800.1-P	Field mustard	cytosol	29.25	27.24
Bra034252.1-P	Field mustard	cytosol	29.95	26.35
Bra011333.1-P	Field mustard	cytosol	28.72	26.16
Bra012491.1-P	Field mustard	mitochondrion	16.46	24.87
Bra033960.1-P	Field mustard	mitochondrion	15.76	24.73
Bra033369.1-P	Field mustard	cytosol	19.96	24.31
Bra028000.1-P	Field mustard	mitochondrion	15.06	23.18
Bra024772.1-P	Field mustard	mitochondrion	15.24	23.08
Bra026195.1-P	Field mustard	cytosol	14.36	23.03
Bra004282.1-P	Field mustard	mitochondrion	14.36	22.71
Bra015381.1-P	Field mustard	cytosol	23.12	20.72
Bra030600.1-P	Field mustard	cytosol, golgi, nucleus	23.29	20.62

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	InterPro:ANTH_dom	EnsemblPlantsGene:Bra024871	EnsemblPlants:Bra024871.1
EnsemblPlants:Bra024871.1-P	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	UniProt:M4E7W5
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF54	SMART:SM00273	SUPFAM:SSF48464
SUPFAM:SSF89009	UniParc:UPI000253F99B	SEG:seg	:	:	:

Description

AT2G01600 (E=3e-262) | epsin N-terminal homology (ENTH) domain-containing protein

Coordinates

chrA06:-:23989069..23992613

Molecular Weight (calculated)

63613.8 Da

IEP (calculated)

4.896

GRAVY (calculated)

-0.443

Length

571 amino acids

Sequence
(BLAST)

001: MGTLQSWRKA YGALKDTTKV GLVRVNSDYA DLDVAIVKAT NHVECPPKDR HLRKIFAATA VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRARIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKST PGQDKGYSRT RDLDGEELLV QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMP KHEAMTSLEI YKRAGQQARS LSEFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRAVDVPMPL LLTYRPDDGL PVEDAEPSHE EREVVLNTDD VVLVSEETEP SPPPPPSANT QSQNIIDTDD LLGLNTAAPD ASAIEEQNAL
401: ALAVIPTDGN PPTPRFGQTN NYDPSGWELA LVTTPSNDIS AATDRQLAGG LDTLTLNSLY DDGAYIASQR PVYGAPAPNP FEVHDPFATS NRTPPPQQPA
501: VSNPFGSYQP TYQPQQQQLQ LAFPNPPANN NPFGDFGDFP VNPVSQQPNT SGFGDFAVNQ HNNPFRSTGL L

Best Arabidopsis Sequence Match ( AT2G01600.1 )
(BLAST)

001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I

Arabidopsis Description

Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.