CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043773_P003	Maize	cytosol	93.25	83.73
Os01t0694900-01	Rice	cytosol	83.84	83.1
TraesCS3A01G258900.1	Wheat	cytosol	80.64	81.22
EES19899	Sorghum	cytosol, mitochondrion, plastid	81.17	81.03
TraesCS3D01G259000.2	Wheat	cytosol	80.99	80.99
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	80.64	80.78
GSMUA_Achr9P21890_001	Banana	cytosol	72.29	72.68
GSMUA_Achr4P13420_001	Banana	cytosol	68.03	71.72
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	66.96	66.49
KRH42533	Soybean	cytosol	66.79	66.2
KRH58627	Soybean	nucleus	66.25	65.55
PGSC0003DMT400075923	Potato	cytosol	65.19	65.19
KRH38239	Soybean	cytosol	64.12	65.16
Solyc04g007860.2.1	Tomato	cytosol, plastid	64.83	64.83
Bra024871.1-P	Field mustard	cytosol	61.99	61.12
CDY17660	Canola	cytosol	61.99	61.12
CDY36239	Canola	cytosol	61.81	60.95
AT2G01600.1	Thale cress	cytosol, mitochondrion	61.46	60.6
CDY09433	Canola	cytosol, mitochondrion	61.28	59.79
CDY48813	Canola	cytosol	61.81	59.69
Bra017439.1-P	Field mustard	cytosol	60.39	59.54
CDY04095	Canola	cytosol	60.39	59.54
CDY17459	Canola	cytosol	60.04	59.3
EES06356	Sorghum	cytosol	54.88	54.21
KXG20765	Sorghum	mitochondrion	53.29	52.82
KXG20534	Sorghum	cytosol, mitochondrion	54.17	52.59
AT1G14910.1	Thale cress	mitochondrion	59.68	48.55
Bra026647.1-P	Field mustard	cytosol	60.92	47.64
KXG19435	Sorghum	cytosol, mitochondrion	47.6	47.52
CDY45299	Canola	mitochondrion	57.9	47.38
CDY53525	Canola	cytosol, mitochondrion	58.44	47.2
KXG31293	Sorghum	cytosol	44.41	45.45
Bra026179.1-P	Field mustard	cytosol, mitochondrion	57.9	42.56
EER92480	Sorghum	cytosol, mitochondrion, plastid	30.02	26.2
EES18258	Sorghum	cytosol	27.89	25.2
EES18894	Sorghum	cytosol	27.18	24.56
KXG33814	Sorghum	cytosol, mitochondrion	24.33	24.08
EER96828	Sorghum	mitochondrion	15.81	22.14
EES13983	Sorghum	mitochondrion	15.28	21.39
EES08262	Sorghum	mitochondrion, plastid	14.21	18.31

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	EntrezGene:8068056	InterPro:ANTH_dom	UniProt:C5XHH1
InterPro:Clathrin_AP_dom2	EnsemblPlants:EES01312	ProteinID:EES01312	ProteinID:EES01312.1	InterPro:ENTH	InterPro:ENTH_VHS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809
InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF56	SMART:SM00273
EnsemblPlantsGene:SORBI_3003G266400	SUPFAM:SSF48464	SUPFAM:SSF89009	unigene:Sbi.7790	UniParc:UPI0001A84742	RefSeq:XP_002456192.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:60335950..60342740

Molecular Weight (calculated)

62478.4 Da

IEP (calculated)

4.859

GRAVY (calculated)

-0.331

Length

563 amino acids

Sequence
(BLAST)

001: MAALQSWRKA YGALKDTTTV SLANLNSDFK DLDVAIVRAT NHVESPPKER HLRKIVAATS IARPRADVAY CIHALARRLA KTRNWIVALK TLVVIHRLLR
101: EGDPAFREEF LTFTQRVQIL QLSNFKDDSS PIAWDCSSWV RTYGLFLEEK LECFRVLKYD IEAERLSKQG QGPEKGHSRT RELNSQDLLE QLPALQQLLY
201: RLIGCRAEGA ANNNYLVQYA LAQVLKESFK IYCAINDGII NLVDKFFEMP KHEALKALDI YRRAGQQAGN LSDFYESCRG LELARNFQFP TLREPPQTFL
301: STMEEYVKEA PRMMPVIEPL ELPEQLLLTY KPEEEEEEEV RESVPIAEEK LQVVEEPAPV PSSQIASPPR PEIADTGDLL GLGDSTHTVS AIEESNALAL
401: AILPTGVDNS TTTQQDRGFD PTGWELALVT TSSNMTPLSM ESNLGGGFDK LTLDSLYDDG TYRQMQQQQL YGSAPPNPFM ASDPFAVSNQ VAPPPSVQMA
501: AMAPQPQHLP MMIEANPFGP PQQHHAGMAP AANPFLDAGF GAFPAGNGMH PQTNPFGGAA QLL

Best Arabidopsis Sequence Match ( AT2G01600.1 )
(BLAST)

001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I

Arabidopsis Description

Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.