CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	81.37	83.42
Os01t0881100-01	Rice	mitochondrion	58.17	63.53
Zm00001d047867_P001	Maize	cytosol	33.57	58.05
EES18258	Sorghum	cytosol	49.56	45.26
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	40.95	43.88
GSMUA_Achr10P...	Banana	mitochondrion	38.31	43.17
GSMUA_Achr11P...	Banana	cytosol	38.14	41.73
CDY15448	Canola	mitochondrion	41.83	41.61
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	42.18	41.24
Bra030518.1-P	Field mustard	mitochondrion	41.83	40.34
Bra036250.1-P	Field mustard	mitochondrion	42.53	40.27
CDY21904	Canola	mitochondrion	42.35	40.23
CDY32494	Canola	mitochondrion	40.42	40.21
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	41.12	40.21
Bra032561.1-P	Field mustard	mitochondrion	42.18	40.2
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	40.77	39.93
AT1G03050.1	Thale cress	cytosol, mitochondrion	42.0	39.9
CDY22070	Canola	mitochondrion	42.18	39.87
KRH58332	Soybean	mitochondrion	40.6	39.49
PGSC0003DMT400059062	Potato	cytosol	41.12	39.26
AT4G02650.1	Thale cress	mitochondrion	41.3	38.46
KRH43936	Soybean	cytosol, mitochondrion	40.07	38.45
KRH10492	Soybean	cytosol, mitochondrion	39.89	38.09
CDY18145	Canola	cytosol	30.93	37.77
CDX89917	Canola	cytosol	31.11	37.74
Bra033369.1-P	Field mustard	cytosol	30.93	37.53
Solyc11g044860.1.1	Tomato	cytosol	31.81	36.2
EER92480	Sorghum	cytosol, mitochondrion, plastid	39.54	34.88
CDY37444	Canola	nucleus	15.82	32.03
EES18894	Sorghum	cytosol	33.04	30.18
EES19899	Sorghum	cytosol, mitochondrion, plastid	24.96	25.18
EES01312	Sorghum	cytosol	24.08	24.33
EES06356	Sorghum	cytosol	24.25	24.21
KXG20765	Sorghum	mitochondrion	24.08	24.12
KXG20534	Sorghum	cytosol, mitochondrion	24.43	23.97
KXG19435	Sorghum	cytosol, mitochondrion	23.55	23.76
KXG31293	Sorghum	cytosol	22.67	23.45
CDX86691	Canola	cytosol, mitochondrion	41.12	23.15
EES13983	Sorghum	mitochondrion	14.76	20.9
EER96828	Sorghum	mitochondrion	12.65	17.91
EES08262	Sorghum	mitochondrion, plastid	13.18	17.16

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	UniProt:A0A1B6Q7A9	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2
InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543
GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268
InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	EnsemblPlants:KXG33814	ProteinID:KXG33814	ProteinID:KXG33814.1
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF30	SMART:SM00273	EnsemblPlantsGene:SORBI_3003G377400
SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI00081ABC5B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:69164809..69166518

Molecular Weight (calculated)

62078.2 Da

IEP (calculated)

5.785

GRAVY (calculated)

-0.293

Length

569 amino acids

Sequence
(BLAST)

001: MAPSKLRQAV GAAKDQTIIA LARASAADEV ASDVEASIVR ATAHGETTPA DERHAAEILT LTRYSRARVA ACVASVSRRL GRARTWPVAV KALALVHCLL
101: AEGDPAYEQE VFLATRRGRR MLDVPRFRDR ERARSRDWDY AAFVRAYAAY LDDRLKQRMQ ARGAGAGAAS PGKWHVDGDT DRTTYEVPEA WELVPPGERP
201: LTEATTTEDV IAKAQQLKHL LGRFIECRPT GKARMNPVVT AALYRLVKES AAMYCELTEV MVVLVDRFAE LGTPACVRVH SIFTSLAKMV DELDDFYSWC
301: KATDVCRPSD VPEIQRVRQK NLDLMDEFIR DRHVSASQWG RSPPTPVEKN DVKAIEPEPK EHQVVAREEN NAGKAAPAEL ASSLVVVDDK TADFLNLDED
401: ASPPSGEEHG RNLTLALFDG NSAEAAPKWV AFDDSEADWE TALVQSTSMP AAAHRWELGG GFNTTVLDMC NHATANAVET NARAFAGSAS SVATQPLGAT
501: VLALPPPPGA STAAAAAARA DPFAASLAVP PPICVQMTDL QTRHRLLMQE QNAWHQNVTH MADWSYNVL

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.