CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43936	Soybean	cytosol, mitochondrion	92.62	93.09
KRH58332	Soybean	mitochondrion	72.48	73.85
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	63.93	65.46
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	55.7	62.52
CDY15448	Canola	mitochondrion	58.56	61.01
GSMUA_Achr10P...	Banana	mitochondrion	51.68	60.99
CDY32494	Canola	mitochondrion	58.05	60.49
GSMUA_Achr11P...	Banana	cytosol	52.68	60.38
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	58.56	60.07
Bra030518.1-P	Field mustard	mitochondrion	59.06	59.66
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	58.22	59.62
Bra032561.1-P	Field mustard	mitochondrion	59.56	59.46
AT1G03050.1	Thale cress	cytosol, mitochondrion	59.23	58.93
PGSC0003DMT400059062	Potato	cytosol	58.05	58.05
CDY22070	Canola	mitochondrion	58.39	57.81
AT4G02650.1	Thale cress	mitochondrion	59.06	57.61
Bra036250.1-P	Field mustard	mitochondrion	58.05	57.57
CDY21904	Canola	mitochondrion	57.55	57.26
Solyc11g044860.1.1	Tomato	cytosol	47.48	56.6
Bra033369.1-P	Field mustard	cytosol	44.46	56.5
CDX89917	Canola	cytosol	44.46	56.5
CDY18145	Canola	cytosol	43.96	56.22
CDY37444	Canola	nucleus	23.32	49.47
HORVU1Hr1G065590.1	Barley	cytosol	49.5	48.68
HORVU0Hr1G000720.3	Barley	cytosol	49.5	48.68
TraesCS1A01G266200.1	Wheat	cytosol	48.66	47.93
TraesCS1B01G277200.1	Wheat	cytosol	48.32	47.6
EES18258	Sorghum	cytosol	49.5	47.35
Zm00001d010228_P001	Maize	cytosol	48.49	46.99
KRH52429	Soybean	endoplasmic reticulum	49.33	45.87
KRH61760	Soybean	mitochondrion	50.17	45.86
Os05t0426100-00	Rice	cytosol	50.17	44.89
TraesCS1D01G266400.1	Wheat	mitochondrion	48.15	43.35
KRH05593	Soybean	cytosol	6.21	43.02
Os01t0881100-01	Rice	mitochondrion	37.08	42.42
KRH20132	Soybean	cytosol	43.12	41.99
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	37.92	40.72
KXG33814	Sorghum	cytosol, mitochondrion	38.09	39.89
CDX86691	Canola	cytosol, mitochondrion	58.72	34.62
KRH20163	Soybean	cytosol	29.87	32.6
KRH03643	Soybean	mitochondrion	29.36	31.93
KRH38239	Soybean	cytosol	29.03	31.23
KRH58627	Soybean	nucleus	29.7	31.11
KRH42533	Soybean	cytosol	29.36	30.81
KRH02791	Soybean	cytosol	29.03	30.14
KRH12315	Soybean	cytosol	29.7	29.7
KRH37330	Soybean	cytosol	29.7	29.7
KRH19094	Soybean	cytosol	28.52	29.62
Zm00001d047867_P001	Maize	cytosol	15.6	28.27
KRH60451	Soybean	mitochondrion	18.96	25.51
KRH41749	Soybean	cytosol	11.74	24.73
KRH42490	Soybean	cytosol	16.28	24.01
KRH58584	Soybean	mitochondrion	15.94	23.81
KRG89239	Soybean	cytosol, mitochondrion	15.1	23.44
KRH54979	Soybean	cytosol	19.8	23.32
KRH38757	Soybean	cytosol, nucleus, peroxisome	16.95	23.27
KRH09259	Soybean	cytosol, nucleus, peroxisome	16.61	23.02
KRH49763	Soybean	mitochondrion	14.6	22.36
KRH17907	Soybean	cytosol	26.85	21.92

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100812794	MapMan:22.1.6.2	EMBL:ACUP02009144	InterPro:ANTH_dom
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	EnsemblPlantsGene:GLYMA_15G050900	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	UniProt:I1MDU2	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
EnsemblPlants:KRH10492	ProteinID:KRH10492	ProteinID:KRH10492.1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF12	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI000233B480	SEG:seg

Description

hypothetical protein

Coordinates

chr15:+:4003079..4006306

Molecular Weight (calculated)

66907.0 Da

IEP (calculated)

4.623

GRAVY (calculated)

-0.478

Length

596 amino acids

Sequence
(BLAST)

001: MAPSSKFRRA LGAVKDQTSI SLAKVGSSTS VADLDVAIVK ATRHDEYPAE EKHIREILSL TCYSRAFISA CVNTLTRRLN KTKSWTVALK TLVLIQRLLL
101: EGDPAYEQEI FFSTRRGTRL LNMSDFRDNS KSDSWDFSAF VRTYALYLDE RLEYKMQSRR GMRSMYGLDE DEEEREREKE IIVRSTPVRD MKLDQIFSKM
201: QHLQLLLERF LACRPTGGAK NHRIVIVALY PIVKESFRIY YDISEILSIL IDRFPDMEVS DCVKVYDIFC RVGKQFDELD LFFGWSKSIG IARSSEYPEI
301: ERVTLKKLEV MEEFIKDKSA LAQSNKLEAI EYKTQEEEVA YEPEPEPEPE EDVNATNALP PPPEEINEEA VEEVKEEPKE GKVVQTEGDL LNLGDDMMTS
401: EEHGEKLALA LFDGAVPEAA TGATQALPWH AFDEGAADWE TTLVQSATNL SNQKPTYGGG FDTLLLDGMY KQGEVNAAMQ GQGYGVSGSA SSVALGSAGR
501: PSMLALPAPP TSRSGSDSIS SDPFAASLAV APPSYVQMSE MEKKQRFLVE EQMMWQQYAK DGMQGQAALA KLHSNNNNNN NSYTGGYPQN YGNYYR

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.