Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09259 | Soybean | cytosol, nucleus, peroxisome | 92.4 | 93.26 |
| VIT_18s0089g01330.t01 | Wine grape | cytosol | 55.07 | 59.45 |
| AT1G33340.1 | Thale cress | cytosol, mitochondrion, nucleus | 46.08 | 53.48 |
| Bra028000.1-P | Field mustard | mitochondrion | 44.47 | 52.02 |
| CDY50184 | Canola | mitochondrion | 43.78 | 51.63 |
| CDX93766 | Canola | mitochondrion | 44.01 | 51.48 |
| KRH05593 | Soybean | cytosol | 6.91 | 34.88 |
| HORVU4Hr1G015050.1 | Barley | mitochondrion | 23.96 | 26.33 |
| TraesCS4B01G088300.1 | Wheat | mitochondrion | 23.73 | 26.08 |
| TraesCS4D01G085400.1 | Wheat | mitochondrion | 23.5 | 25.82 |
| TraesCS4A01G227800.1 | Wheat | mitochondrion | 22.81 | 25.06 |
| Zm00001d049002_P001 | Maize | mitochondrion | 23.27 | 24.94 |
| Zm00001d007272_P001 | Maize | mitochondrion | 22.58 | 24.81 |
| EES08262 | Sorghum | mitochondrion, plastid | 24.42 | 24.26 |
| Os11t0244600-01 | Rice | cytosol | 21.66 | 23.8 |
| KRH58584 | Soybean | mitochondrion | 19.59 | 21.3 |
| KRH42490 | Soybean | cytosol | 19.59 | 21.04 |
| KRH41749 | Soybean | cytosol | 13.59 | 20.85 |
| KRH60451 | Soybean | mitochondrion | 20.97 | 20.54 |
| KRG89239 | Soybean | cytosol, mitochondrion | 17.74 | 20.05 |
| KRH49763 | Soybean | mitochondrion | 16.59 | 18.51 |
| KRH38239 | Soybean | cytosol | 23.5 | 18.41 |
| KRH02791 | Soybean | cytosol | 23.96 | 18.12 |
| KRH19094 | Soybean | cytosol | 23.73 | 17.94 |
| KRH42533 | Soybean | cytosol | 23.27 | 17.78 |
| KRH58627 | Soybean | nucleus | 23.04 | 17.57 |
| KRH58332 | Soybean | mitochondrion | 23.27 | 17.27 |
| KRH20163 | Soybean | cytosol | 21.66 | 17.22 |
| KRH03643 | Soybean | mitochondrion | 21.43 | 16.97 |
| KRH10492 | Soybean | cytosol, mitochondrion | 23.27 | 16.95 |
| KRH43936 | Soybean | cytosol, mitochondrion | 23.04 | 16.86 |
| KRH52429 | Soybean | endoplasmic reticulum | 24.88 | 16.85 |
| KRH37330 | Soybean | cytosol | 22.81 | 16.61 |
| KRH12315 | Soybean | cytosol | 22.58 | 16.44 |
| KRH61760 | Soybean | mitochondrion | 24.65 | 16.41 |
| KRH54979 | Soybean | cytosol | 18.89 | 16.21 |
| KRH20132 | Soybean | cytosol | 22.35 | 15.85 |
| KRH17907 | Soybean | cytosol | 21.43 | 12.74 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | EntrezGene:100819393 | MapMan:35.1 | EMBL:ACUP02005872 | InterPro:ANTH_dom |
| InterPro:Clathrin_AP_dom2 | InterPro:ENTH | InterPro:ENTH_VHS | EnsemblPlantsGene:GLYMA_09G156200 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030136 |
| GO:GO:0030276 | GO:GO:0048268 | UniProt:I1L3M6 | InterPro:IPR008942 | InterPro:IPR013809 | InterPro:IPR014712 |
| EnsemblPlants:KRH38757 | ProteinID:KRH38757 | ProteinID:KRH38757.1 | PFAM:PF07651 | PFscan:PS50942 | PANTHER:PTHR22951 |
| PANTHER:PTHR22951:SF14 | SMART:SM00273 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | UniParc:UPI0002338A1C | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:-:37933339..37935230
Molecular Weight (calculated)
48467.5 Da
IEP (calculated)
7.411
GRAVY (calculated)
-0.158
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDIQGKLR LALGSVKDHA SIGKAMMYHN YQHDGFSNIE IAVLRATGHD NGTIDDRYMH EILFLVSNSP GSIPFLAERI SCRLGKTKDH VVALKTLVLI
101: HRLLRGGNRS FEQELCKAHV SGHLQLQIST TRCFTKSSSV VGFLHKYAAY LEERMSWLIN QAGKLEPVMS KGLEFRRYDE KSIDMAFRIL PKCQMLIDKV
201: LECSPHDVLC SDHSLAQAAM SNTLRESFQV YMTFSEGIAA LVNMFFDLTA SARGLACEIL KKASLQSQKL HDLYESCKQV VENKSLDYPF VKIISMNHIV
301: ALEQLGSPQN ELEASHVSLK SISSRPPPIS GHFTKSKEIE LAVEAKESKR SEESIGIDLS PTPTLLSWTL ETKISMVWVV FEDEFPNNES KVNPAQQKLA
401: GVDAVCDIKS EYGRPSVFLN PFSSSFQTSM STKV
101: HRLLRGGNRS FEQELCKAHV SGHLQLQIST TRCFTKSSSV VGFLHKYAAY LEERMSWLIN QAGKLEPVMS KGLEFRRYDE KSIDMAFRIL PKCQMLIDKV
201: LECSPHDVLC SDHSLAQAAM SNTLRESFQV YMTFSEGIAA LVNMFFDLTA SARGLACEIL KKASLQSQKL HDLYESCKQV VENKSLDYPF VKIISMNHIV
301: ALEQLGSPQN ELEASHVSLK SISSRPPPIS GHFTKSKEIE LAVEAKESKR SEESIGIDLS PTPTLLSWTL ETKISMVWVV FEDEFPNNES KVNPAQQKLA
401: GVDAVCDIKS EYGRPSVFLN PFSSSFQTSM STKV
001: MRLDLSAKFR QVLGLAKDHA SIGRAIVQNY NEKAFFDIEV AVVRATSHDD CPVDDKTMHE ILFLVSNTPG SIPFLAEQIS RRLAKTRDCL VAGKTLLLFH
101: RLLRGSSRSI EQQLHIAHTS GHLQIGCSWF MMSLDSRSFV FLQNYVAYLQ ERVGWIINQA GKLEPVMSGG TKFSRYKEKS MDLVFHILPK CQEFIAQVLK
201: CSPVDAWPID NLVQAATGNI LKESFQVYMT YSDGMTALVS MLFDLSRPAR DLACGMLRKA SQQIQDLRIL YDKCRGFAGM KSLDYPSVQA ISMDHIVALE
301: ECSSYGGKRG FSLSTNLRDA ITCNELKQEQ HSASFSSTSP FSLPVETKIS MVWVVFDNED GEESDKQTEK AYER
101: RLLRGSSRSI EQQLHIAHTS GHLQIGCSWF MMSLDSRSFV FLQNYVAYLQ ERVGWIINQA GKLEPVMSGG TKFSRYKEKS MDLVFHILPK CQEFIAQVLK
201: CSPVDAWPID NLVQAATGNI LKESFQVYMT YSDGMTALVS MLFDLSRPAR DLACGMLRKA SQQIQDLRIL YDKCRGFAGM KSLDYPSVQA ISMDHIVALE
301: ECSSYGGKRG FSLSTNLRDA ITCNELKQEQ HSASFSSTSP FSLPVETKIS MVWVVFDNED GEESDKQTEK AYER
Arabidopsis Description
Putative clathrin assembly protein At1g33340 [Source:UniProtKB/Swiss-Prot;Acc:Q9C502]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.