Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028000.1-P | Field mustard | mitochondrion | 83.96 | 84.64 |
| CDY50184 | Canola | mitochondrion | 83.16 | 84.51 |
| CDX93766 | Canola | mitochondrion | 83.69 | 84.37 |
| VIT_18s0089g01330.t01 | Wine grape | cytosol | 54.01 | 50.25 |
| KRH09259 | Soybean | cytosol, nucleus, peroxisome | 54.55 | 47.44 |
| KRH38757 | Soybean | cytosol, nucleus, peroxisome | 53.48 | 46.08 |
| HORVU4Hr1G015050.1 | Barley | mitochondrion | 23.26 | 22.03 |
| TraesCS4B01G088300.1 | Wheat | mitochondrion | 22.99 | 21.77 |
| TraesCS4A01G227800.1 | Wheat | mitochondrion | 22.99 | 21.77 |
| TraesCS4D01G085400.1 | Wheat | mitochondrion | 22.73 | 21.52 |
| Zm00001d049002_P001 | Maize | mitochondrion | 23.26 | 21.48 |
| Os11t0244600-01 | Rice | cytosol | 22.46 | 21.27 |
| Zm00001d007272_P001 | Maize | mitochondrion | 21.66 | 20.51 |
| EES08262 | Sorghum | mitochondrion, plastid | 23.8 | 20.37 |
| AT2G01920.1 | Thale cress | mitochondrion | 15.24 | 18.27 |
| Solyc01g005170.1.1 | Tomato | cytosol, mitochondrion, plastid | 20.05 | 18.12 |
| PGSC0003DMT400092428 | Potato | cytosol, mitochondrion, nucleus | 20.86 | 17.73 |
| AT1G25240.2 | Thale cress | mitochondrion | 17.11 | 16.98 |
| AT1G68110.1 | Thale cress | mitochondrion | 17.11 | 16.89 |
| AT1G14686.1 | Thale cress | cytosol | 15.24 | 16.81 |
| AT4G02650.1 | Thale cress | mitochondrion | 25.13 | 15.38 |
| AT2G01600.1 | Thale cress | cytosol, mitochondrion | 22.99 | 15.06 |
| AT1G03050.1 | Thale cress | cytosol, mitochondrion | 23.26 | 14.52 |
| AT4G32285.2 | Thale cress | cytosol | 24.6 | 14.49 |
| AT2G25430.1 | Thale cress | cytosol | 25.13 | 14.4 |
| AT5G57200.1 | Thale cress | cytosol | 22.46 | 14.21 |
| AT5G35200.2 | Thale cress | cytosol | 19.79 | 13.6 |
| AT4G25940.1 | Thale cress | cytosol | 21.39 | 13.31 |
| AT1G05020.1 | Thale cress | cytosol | 21.12 | 12.1 |
| AT1G14910.1 | Thale cress | mitochondrion | 22.19 | 11.99 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:35.1 | EntrezGene:840228 | UniProt:A0A178WBM3 | ProteinID:AAG51212.1 |
| ProteinID:AAG51280.1 | ProteinID:AEE31585.1 | EMBL:AK176052 | InterPro:ANTH_dom | ArrayExpress:AT1G33340 | EnsemblPlantsGene:AT1G33340 |
| RefSeq:AT1G33340 | TAIR:AT1G33340 | RefSeq:AT1G33340-TAIR-G | EnsemblPlants:AT1G33340.1 | TAIR:AT1G33340.1 | EMBL:BT010651 |
| InterPro:Clathrin_AP_dom2 | InterPro:ENTH | InterPro:ENTH_VHS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005543 | GO:GO:0005545 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005905 | GO:GO:0006810 | GO:GO:0006897 | GO:GO:0008150 | GO:GO:0008289 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030136 | GO:GO:0030276 | GO:GO:0031410 |
| GO:GO:0048268 | InterPro:IPR008942 | InterPro:IPR013809 | InterPro:IPR014712 | RefSeq:NP_174602.1 | ProteinID:OAP15201.1 |
| PFAM:PF07651 | PO:PO:0000013 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50942 | PANTHER:PTHR22951 |
| PANTHER:PTHR22951:SF14 | UniProt:Q9C502 | SMART:SM00273 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | UniParc:UPI00000A1136 |
| SEG:seg | : | : | : | : | : |
Description
Putative clathrin assembly protein At1g33340 [Source:UniProtKB/Swiss-Prot;Acc:Q9C502]
Coordinates
chr1:+:12087196..12088999
Molecular Weight (calculated)
42112.7 Da
IEP (calculated)
7.248
GRAVY (calculated)
-0.156
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLDLSAKFR QVLGLAKDHA SIGRAIVQNY NEKAFFDIEV AVVRATSHDD CPVDDKTMHE ILFLVSNTPG SIPFLAEQIS RRLAKTRDCL VAGKTLLLFH
101: RLLRGSSRSI EQQLHIAHTS GHLQIGCSWF MMSLDSRSFV FLQNYVAYLQ ERVGWIINQA GKLEPVMSGG TKFSRYKEKS MDLVFHILPK CQEFIAQVLK
201: CSPVDAWPID NLVQAATGNI LKESFQVYMT YSDGMTALVS MLFDLSRPAR DLACGMLRKA SQQIQDLRIL YDKCRGFAGM KSLDYPSVQA ISMDHIVALE
301: ECSSYGGKRG FSLSTNLRDA ITCNELKQEQ HSASFSSTSP FSLPVETKIS MVWVVFDNED GEESDKQTEK AYER
101: RLLRGSSRSI EQQLHIAHTS GHLQIGCSWF MMSLDSRSFV FLQNYVAYLQ ERVGWIINQA GKLEPVMSGG TKFSRYKEKS MDLVFHILPK CQEFIAQVLK
201: CSPVDAWPID NLVQAATGNI LKESFQVYMT YSDGMTALVS MLFDLSRPAR DLACGMLRKA SQQIQDLRIL YDKCRGFAGM KSLDYPSVQA ISMDHIVALE
301: ECSSYGGKRG FSLSTNLRDA ITCNELKQEQ HSASFSSTSP FSLPVETKIS MVWVVFDNED GEESDKQTEK AYER
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.