Factsheet for AT4G02650.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22070	Canola	mitochondrion	81.01	82.23
CDY21904	Canola	mitochondrion	80.2	81.8
Bra036250.1-P	Field mustard	mitochondrion	80.36	81.7
AT1G03050.1	Thale cress	cytosol, mitochondrion	73.32	74.79
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	59.25	62.2
KRH43936	Soybean	cytosol, mitochondrion	58.1	59.87
KRH58332	Soybean	mitochondrion	57.28	59.83
KRH10492	Soybean	cytosol, mitochondrion	57.61	59.06
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	55.16	58.0
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	54.66	57.39
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	49.26	56.69
GSMUA_Achr11P...	Banana	cytosol	46.97	55.19
PGSC0003DMT400059062	Potato	cytosol	53.36	54.7
Solyc11g044860.1.1	Tomato	cytosol	44.35	54.2
GSMUA_Achr10P...	Banana	mitochondrion	44.19	53.47
HORVU1Hr1G065590.1	Barley	cytosol	45.34	45.71
HORVU0Hr1G000720.3	Barley	cytosol	45.17	45.54
EES18258	Sorghum	cytosol	45.99	45.1
TraesCS1A01G266200.1	Wheat	cytosol	44.52	44.96
TraesCS1B01G277200.1	Wheat	cytosol	44.19	44.63
Zm00001d010228_P001	Maize	cytosol	44.03	43.74
Os05t0426100-00	Rice	cytosol	46.97	43.09
Os01t0881100-01	Rice	mitochondrion	36.33	42.61
AT4G32285.2	Thale cress	cytosol	43.86	42.2
TraesCS1D01G266400.1	Wheat	mitochondrion	44.84	41.39
KXG33814	Sorghum	cytosol, mitochondrion	38.46	41.3
AT2G25430.1	Thale cress	cytosol	43.86	41.04
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	36.82	40.54
Zm00001d047867_P001	Maize	cytosol	16.37	30.4
AT2G01600.1	Thale cress	cytosol, mitochondrion	27.66	29.6
AT5G35200.2	Thale cress	cytosol	25.53	28.68
AT5G57200.1	Thale cress	cytosol	26.35	27.24
AT1G05020.1	Thale cress	cytosol	27.33	25.57
AT1G33340.1	Thale cress	cytosol, mitochondrion, nucleus	15.38	25.13
AT4G25940.1	Thale cress	cytosol	24.71	25.12
AT1G14910.1	Thale cress	mitochondrion	27.99	24.71
AT1G14686.1	Thale cress	cytosol	12.77	23.01
AT1G68110.1	Thale cress	mitochondrion	14.24	22.96
AT1G25240.2	Thale cress	mitochondrion	13.91	22.55
AT2G01920.1	Thale cress	mitochondrion	10.8	21.15

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	EntrezGene:828212	ProteinID:AAC78254.1	ProteinID:AEE82209.1
EMBL:AK118440	InterPro:ANTH_dom	ArrayExpress:AT4G02650	EnsemblPlantsGene:AT4G02650	RefSeq:AT4G02650	TAIR:AT4G02650
RefSeq:AT4G02650-TAIR-G	EnsemblPlants:AT4G02650.1	TAIR:AT4G02650.1	Unigene:At.34282	ProteinID:CAB80758.1	InterPro:Clathrin_AP_dom2
ncoils:Coil	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0005905	GO:GO:0006810	GO:GO:0006897	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0031410
GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	RefSeq:NP_192174.2	PFAM:PF07651
PO:PO:0001016	PO:PO:0001017	PO:PO:0025195	PO:PO:0025281	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF12	UniProt:Q8GX47	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0000196B09
SEG:seg	:	:	:	:	:

Description

Putative clathrin assembly protein At4g02650 [Source:UniProtKB/Swiss-Prot;Acc:Q8GX47]

Coordinates

chr4:+:1156379..1158788

Molecular Weight (calculated)

68237.1 Da

IEP (calculated)

4.967

GRAVY (calculated)

-0.594

Length

611 amino acids

Sequence
(BLAST)

001: MGSSKLKRAI GAVKDQTSVG LAKVGGRSSS LTELEIAVVK ATRHDDYPAE DKYIREILCL TSYSRNYVSA CVATLSRRLN KTKNWSVALK TLILIQRLLT
101: DGDRAYEQEI FFATRRGTRL LNMSDFRDAS QSDSWDYSAF VRTYALYLDE RLDYRMQGRR GKKKSGGGGG GDGDSGEEDD HRGTSNDIRS KAIVVKSKPV
201: AEMKTEKIFN RVQHLQQLLD RFLACRPTGN AKNNRVVIVA MYPIVKESFQ LYYNITEIMG VLIERFMELD IHDSIKVYEI FCRVSKQFDE LDPFYGWCKN
301: MAVARSSEYP ELEKITQKKL DLMDEFIRDK SALAAQTTKS SSKRSNKSEE EESKTEYIQE NQEDLNSIKA LPAPEQKEEE EEEEKMETKK DVEEVVSRQD
401: QEGDLLDLTD EAGVTAGTVG DSLALALFDG VVGTESASGP GWEAFNDNSA DWETDLVRSA TRLSGQKSEL GGGFDTLLLD GMYQYGAVNA AVKTSTAYGS
501: SGSASSVAFG SAGSPAASML ALPAPPPTAN GNRNSPVMVD PFAASLEVAP PAYVQMNDME KKQRLLMEEQ IMWDQYNRSG RQGHMNFGQN QQQQYYQLPY
601: SMGPYSYTPR Y

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.