Factsheet for Solyc11g044860.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059062	Potato	cytosol	91.8	77.01
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	67.4	58.0
CDX89917	Canola	cytosol	49.2	52.45
CDY18145	Canola	cytosol	48.8	52.36
Bra033369.1-P	Field mustard	cytosol	49.0	52.24
KRH43936	Soybean	cytosol, mitochondrion	56.6	47.72
KRH10492	Soybean	cytosol, mitochondrion	56.6	47.48
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	55.0	47.25
KRH58332	Soybean	mitochondrion	53.8	45.98
CDY15448	Canola	mitochondrion	52.2	45.63
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	47.8	45.01
Bra030518.1-P	Field mustard	mitochondrion	53.0	44.92
AT1G03050.1	Thale cress	cytosol, mitochondrion	53.8	44.91
CDY32494	Canola	mitochondrion	51.2	44.76
Bra032561.1-P	Field mustard	mitochondrion	53.2	44.56
CDY37444	Canola	nucleus	25.0	44.48
AT4G02650.1	Thale cress	mitochondrion	54.2	44.35
GSMUA_Achr10P...	Banana	mitochondrion	44.2	43.76
CDY21904	Canola	mitochondrion	51.0	42.57
CDY22070	Canola	mitochondrion	51.2	42.52
Bra036250.1-P	Field mustard	mitochondrion	50.8	42.26
GSMUA_Achr11P...	Banana	cytosol	41.6	40.0
Solyc06g011450.1.1	Tomato	cytosol	44.4	36.16
TraesCS1A01G266200.1	Wheat	cytosol	43.4	35.87
HORVU0Hr1G000720.3	Barley	cytosol	43.4	35.81
HORVU1Hr1G065590.1	Barley	cytosol	43.4	35.81
Solyc08g059660.1.1	Tomato	cytosol	45.2	35.53
EES18258	Sorghum	cytosol	43.8	35.15
TraesCS1B01G277200.1	Wheat	cytosol	42.2	34.88
Os05t0426100-00	Rice	cytosol	46.2	34.68
Solyc07g008060.1.1	Tomato	cytosol	42.2	34.36
Zm00001d010228_P001	Maize	cytosol	41.4	33.66
TraesCS1D01G266400.1	Wheat	mitochondrion	42.2	31.87
KXG33814	Sorghum	cytosol, mitochondrion	36.2	31.81
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	34.6	31.17
Os01t0881100-01	Rice	mitochondrion	32.2	30.9
Zm00001d047867_P001	Maize	cytosol	17.6	26.75
CDX86691	Canola	cytosol, mitochondrion	52.6	26.01
Solyc12g017430.1.1	Tomato	nucleus	9.8	23.11
Solyc02g043810.2.1	Tomato	cytosol	26.0	22.49
Solyc04g007860.2.1	Tomato	cytosol, plastid	24.8	22.02
Solyc12g017440.1.1	Tomato	cytosol	12.8	21.4
Solyc07g007820.2.1	Tomato	cytosol	23.6	20.96
Solyc12g010530.1.1	Tomato	cytosol	20.8	17.51
Solyc12g006000.1.1	Tomato	cytosol	25.0	17.17
Solyc07g049380.1.1	Tomato	cytosol	22.0	14.8
Solyc01g005170.1.1	Tomato	cytosol, mitochondrion, plastid	12.2	14.73
Solyc01g005070.2.1	Tomato	mitochondrion	11.4	14.32
Solyc04g008350.1.1	Tomato	mitochondrion	11.2	14.25

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	UniProt:K4D8F1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF12	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:Solyc11g044860.1	EnsemblPlants:Solyc11g044860.1.1	UniParc:UPI000276A470
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:32167888..32169478

Molecular Weight (calculated)

56136.8 Da

IEP (calculated)

4.436

GRAVY (calculated)

-0.567

Length

500 amino acids

Sequence
(BLAST)

001: MLIHRLLSDG DPSYEQEIFF ATRRGTRLLN MSEFRDTRSN SWDYSALVRT YSLYLDEQLE YRMQSRRGKR SAYAYDEDLD NVDPETVTVK QPTPLSEMKN
101: EHIFSRMQYL VQLLDRFLAC RPAGLARNNR TVFVALYPLV NESFQIYYQI KEIISALIDK FHELSIPESV KVHETFCRIN KQYVDLEQFY NWCKTVGIGR
201: SSEYPDIENI PKKKLDLIDE FIREKSILEQ NGNAKRYEPK SEIVEETQEP EPEPEPEPEQ AMNEIKALPP PEGIPEEIKE EKHQEESEEV AKTQDVVDFL
301: NLGEDALTME QHGDQLALAL FDGGGPPTDG PSTTTSPWEA FNNSGDWETA LVQHTSHLSN QKASLPGGFN TIMLDGMYQQ GAVAQVVASS GVVATGSASS
401: VALGSAGRPA MLALPAPPSA DGGAQSTTCT TTDPFAASLA IAPPSYVQMS EMEKKQRLLV DEQVMWQQYQ KDGMQGQVGL ARTTQSNPYA YNTGGYTQTF

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.