CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22070	Canola	mitochondrion	97.16	96.68
AT4G02650.1	Thale cress	mitochondrion	81.8	80.2
CDY15448	Canola	mitochondrion	68.45	71.68
CDX89917	Canola	cytosol	54.26	69.3
CDY32494	Canola	mitochondrion	66.11	69.23
CDY18145	Canola	cytosol	53.42	68.67
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	58.6	60.31
KRH43936	Soybean	cytosol, mitochondrion	58.6	59.19
CDY37444	Canola	nucleus	27.71	59.07
KRH58332	Soybean	mitochondrion	56.76	58.12
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	51.09	57.63
KRH10492	Soybean	cytosol, mitochondrion	57.26	57.55
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	55.09	56.7
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	54.76	56.45
GSMUA_Achr11P...	Banana	cytosol	47.75	55.0
GSMUA_Achr10P...	Banana	mitochondrion	45.41	53.86
PGSC0003DMT400059062	Potato	cytosol	52.75	53.02
Solyc11g044860.1.1	Tomato	cytosol	42.57	51.0
HORVU1Hr1G065590.1	Barley	cytosol	46.08	45.54
HORVU0Hr1G000720.3	Barley	cytosol	45.91	45.38
CDY11530	Canola	cytosol	43.91	45.34
TraesCS1A01G266200.1	Wheat	cytosol	45.74	45.29
CDY35361	Canola	cytosol	44.57	45.18
CDX76976	Canola	cytosol	44.57	45.03
TraesCS1B01G277200.1	Wheat	cytosol	45.24	44.79
EES18258	Sorghum	cytosol	46.58	44.78
CDX68831	Canola	cytosol	43.57	44.16
CDX75232	Canola	cytosol	43.57	44.01
Os01t0881100-01	Rice	mitochondrion	38.23	43.95
Zm00001d010228_P001	Maize	cytosol	44.74	43.58
Os05t0426100-00	Rice	cytosol	47.91	43.09
KXG33814	Sorghum	cytosol, mitochondrion	40.23	42.35
TraesCS1D01G266400.1	Wheat	mitochondrion	45.91	41.54
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	38.06	41.08
CDX86691	Canola	cytosol, mitochondrion	67.61	40.06
CDX76760	Canola	cytosol	30.05	38.54
CDX76977	Canola	cytosol	32.22	36.97
CDY41768	Canola	cytosol, mitochondrion	22.54	33.92
CDY42239	Canola	cytosol	18.86	33.53
CDY71126	Canola	cytosol, mitochondrion	23.54	33.1
Zm00001d047867_P001	Maize	cytosol	16.86	30.7
CDY18283	Canola	cytosol, nucleus, peroxisome	24.54	30.62
CDY12401	Canola	cytosol, mitochondrion	27.55	30.56
CDY04095	Canola	cytosol	27.71	29.07
CDY17459	Canola	cytosol	27.38	28.77
CDY17660	Canola	cytosol	27.38	28.72
CDY36239	Canola	cytosol	27.05	28.37
CDY09433	Canola	cytosol, mitochondrion	27.05	28.08
CDY48813	Canola	cytosol	27.21	27.96
CDY52732	Canola	cytosol	27.21	27.86
CDY47927	Canola	cytosol	23.37	27.72
CDY38276	Canola	cytosol	27.38	27.7
CDY53396	Canola	cytosol	26.71	26.89
CDY15531	Canola	cytosol, golgi, nucleus	27.21	26.72
CDX89382	Canola	cytosol	25.88	25.79
CDX94400	Canola	cytosol	25.54	25.67
CDY50184	Canola	mitochondrion	14.86	24.18
CDX81471	Canola	mitochondrion	14.86	24.18
CDY12691	Canola	mitochondrion	14.69	24.18
CDY01884	Canola	mitochondrion	14.36	24.09
CDX86594	Canola	cytosol, golgi, nucleus	26.04	24.0
CDX93766	Canola	mitochondrion	14.69	23.72
CDY45299	Canola	mitochondrion	26.88	23.4
CDY53525	Canola	cytosol, mitochondrion	27.21	23.39
CDY45281	Canola	cytosol	13.36	23.32
CDY41097	Canola	cytosol	13.19	22.97
CDX96047	Canola	mitochondrion	13.69	22.71
CDY64692	Canola	mitochondrion	14.36	22.69
CDY03862	Canola	mitochondrion	14.36	22.57
CDY57160	Canola	mitochondrion	13.69	21.69
CDY60368	Canola	mitochondrion	13.69	21.69

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	GO:A0A078G945	UniProt:A0A078G945	InterPro:ANTH_dom
EnsemblPlants:CDY21904	ProteinID:CDY21904	ProteinID:CDY21904.1	InterPro:Clathrin_AP_dom2	ncoils:Coil	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSBRNA2T00018226001
InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF12	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0004EDCBF6	SEG:seg

Description

BnaC09g00100DBnaC09g00100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G945]

Coordinates

chrLK032126:+:55358..58159

Molecular Weight (calculated)

66649.6 Da

IEP (calculated)

4.961

GRAVY (calculated)

-0.477

Length

599 amino acids

Sequence
(BLAST)

001: MASSKLRRAI GAVKDQTSVG LAKVGGRSSS LTELEVAIVK ATRHDEYPAE EKYVREILSL TSYSRNYVSA CVSILSRRLS RTKNWSVALK ALILIQRMLT
101: QGDKAYEEEI FFATRRGTRL LNMSDFRDAD GSDSWDYSAF VRTYALYLDE RLDFRMQRRK GKNGDGGGDD DSGDDDHRET SANVRSRALV VKTKPVKEMK
201: TEKIFIRVQH LQQLLDRFLA CRPTGNAKNN RVVIVALYPI VKDSFQIYCN ITEIMGVLID RFMELDVHDS IKVYDIFSRV SKQLDELDPF HGWCKKMGVV
301: RSSEYPELEK ITQKKLDIMD EFIKDKSLLA AQALMSPSRK SNKSEEEEVK DIQEDLNAVK ALPAPELEEE EEEKEETETK KDVQEVVSGQ DQEGDLLDLT
401: GEAGDTTLSV GDSLALALFD GAVATEAASG PGWEAFDDDS ADWETALVKS ATRLSAQKSE LGGGFDHLLL DGMYQYGALN AAVNASTAYG SSGSASSVAF
501: GSAGRPAASM LALPAPPPAS NGNGGRSLVT MDPFAASLEV VPPSYVQMSD MEKKQRLVME EQMMWDQYNR NGRLGHMQNQ QQHFHVPYSM GPYSYTPHY

Best Arabidopsis Sequence Match ( AT4G02650.1 )
(BLAST)

001: MGSSKLKRAI GAVKDQTSVG LAKVGGRSSS LTELEIAVVK ATRHDDYPAE DKYIREILCL TSYSRNYVSA CVATLSRRLN KTKNWSVALK TLILIQRLLT
101: DGDRAYEQEI FFATRRGTRL LNMSDFRDAS QSDSWDYSAF VRTYALYLDE RLDYRMQGRR GKKKSGGGGG GDGDSGEEDD HRGTSNDIRS KAIVVKSKPV
201: AEMKTEKIFN RVQHLQQLLD RFLACRPTGN AKNNRVVIVA MYPIVKESFQ LYYNITEIMG VLIERFMELD IHDSIKVYEI FCRVSKQFDE LDPFYGWCKN
301: MAVARSSEYP ELEKITQKKL DLMDEFIRDK SALAAQTTKS SSKRSNKSEE EESKTEYIQE NQEDLNSIKA LPAPEQKEEE EEEEKMETKK DVEEVVSRQD
401: QEGDLLDLTD EAGVTAGTVG DSLALALFDG VVGTESASGP GWEAFNDNSA DWETDLVRSA TRLSGQKSEL GGGFDTLLLD GMYQYGAVNA AVKTSTAYGS
501: SGSASSVAFG SAGSPAASML ALPAPPPTAN GNRNSPVMVD PFAASLEVAP PAYVQMNDME KKQRLLMEEQ IMWDQYNRSG RQGHMNFGQN QQQQYYQLPY
601: SMGPYSYTPR Y

Arabidopsis Description

Putative clathrin assembly protein At4g02650 [Source:UniProtKB/Swiss-Prot;Acc:Q8GX47]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.