CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42239	Canola	cytosol	60.2	90.21
Bra020460.1-P	Field mustard	cytosol	91.09	77.44
CDY52732	Canola	cytosol	86.53	74.7
CDY38276	Canola	cytosol	87.52	74.66
AT5G57200.1	Thale cress	cytosol	84.95	72.59
Os06t0661400-01	Rice	cytosol	33.47	67.6
CDX94400	Canola	cytosol	76.63	64.93
CDX89382	Canola	cytosol	77.23	64.89
GSMUA_Achr7P04960_001	Banana	cytosol	61.58	56.55
KRH37330	Soybean	cytosol	65.74	55.7
VIT_11s0103g00620.t01	Wine grape	cytosol	64.95	55.5
KRH12315	Soybean	cytosol	65.15	55.2
Os06t0699800-00	Rice	cytosol	47.13	54.21
GSMUA_Achr1P15690_001	Banana	cytosol	59.6	53.85
KRH19094	Soybean	cytosol	60.99	53.66
KRH02791	Soybean	cytosol	60.59	53.31
PGSC0003DMT400036570	Potato	cytosol	60.2	53.05
CDY41768	Canola	cytosol, mitochondrion	41.78	53.02
GSMUA_Achr4P20660_001	Banana	cytosol	58.22	52.78
Solyc02g043810.2.1	Tomato	cytosol	60.4	52.77
CDY71126	Canola	cytosol, mitochondrion	44.36	52.58
GSMUA_Achr3P05590_001	Banana	cytosol	56.63	52.38
HORVU7Hr1G097510.7	Barley	mitochondrion	52.28	51.66
EES06356	Sorghum	cytosol	58.22	51.58
Zm00001d015430_P001	Maize	cytosol	56.83	49.74
Os02t0175700-01	Rice	plasma membrane	56.83	49.23
CDY17660	Canola	cytosol	55.25	48.86
CDY36239	Canola	cytosol	54.65	48.34
KXG20534	Sorghum	cytosol, mitochondrion	55.45	48.28
TraesCS6B01G181800.1	Wheat	cytosol	54.85	48.01
CDY17459	Canola	cytosol	54.06	47.89
TraesCS6D01G143700.1	Wheat	cytosol	55.64	47.87
CDY04095	Canola	cytosol	54.06	47.81
KXG20765	Sorghum	mitochondrion	53.66	47.71
Zm00001d036672_P005	Maize	cytosol	54.26	47.65
CDY48813	Canola	cytosol	54.65	47.34
TraesCS6A01G154100.1	Wheat	cytosol	54.85	47.27
CDY09433	Canola	cytosol, mitochondrion	53.86	47.14
TraesCS7A01G421900.1	Wheat	mitochondrion	52.87	46.84
TraesCS7B01G322300.1	Wheat	mitochondrion	52.28	46.73
TraesCS7D01G414100.1	Wheat	mitochondrion	52.48	46.65
HORVU7Hr1G109970.5	Barley	cytosol	51.88	45.8
TraesCS7B01G393800.2	Wheat	cytosol	51.68	45.79
TraesCS7D01G476900.2	Wheat	cytosol	52.08	45.42
TraesCS7A01G490500.2	Wheat	cytosol	51.49	45.3
HORVU6Hr1G030980.1	Barley	cytosol	55.25	45.07
TraesCS7B01G430700.2	Wheat	cytosol	12.08	42.66
CDY12401	Canola	cytosol, mitochondrion	45.15	42.22
CDY45299	Canola	mitochondrion	51.88	38.08
CDY53525	Canola	cytosol, mitochondrion	51.88	37.59
CDY11530	Canola	cytosol	28.91	25.17
CDX76976	Canola	cytosol	29.31	24.96
CDY35361	Canola	cytosol	29.11	24.87
CDY03862	Canola	mitochondrion	18.61	24.67
CDY64692	Canola	mitochondrion	18.42	24.54
CDY18283	Canola	cytosol, nucleus, peroxisome	22.97	24.17
CDX68831	Canola	cytosol	28.12	24.03
CDX75232	Canola	cytosol	28.12	23.95
CDY12691	Canola	mitochondrion	17.23	23.9
CDY15448	Canola	mitochondrion	26.93	23.78
CDY50184	Canola	mitochondrion	17.23	23.64
CDX81471	Canola	mitochondrion	17.23	23.64
CDY32494	Canola	mitochondrion	26.53	23.43
CDY21904	Canola	mitochondrion	27.72	23.37
CDY60368	Canola	mitochondrion	17.43	23.28
CDY22070	Canola	mitochondrion	27.72	23.26
CDY01884	Canola	mitochondrion	16.44	23.25
CDX93766	Canola	mitochondrion	17.03	23.18
CDX96047	Canola	mitochondrion	16.44	22.99
CDY57160	Canola	mitochondrion	17.03	22.75
CDY45281	Canola	cytosol	15.25	22.45
CDY41097	Canola	cytosol	14.85	21.8
CDY15531	Canola	cytosol, golgi, nucleus	24.36	20.16
CDY53396	Canola	cytosol	22.97	19.5
CDX89917	Canola	cytosol	17.62	18.98
CDX86594	Canola	cytosol, golgi, nucleus	24.36	18.92
CDY18145	Canola	cytosol	17.43	18.88
CDX76977	Canola	cytosol	17.82	17.24
CDX76760	Canola	cytosol	15.84	17.13
CDX86691	Canola	cytosol, mitochondrion	28.32	14.14
CDY37444	Canola	nucleus	5.15	9.25

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	GO:A0A078ICT8	UniProt:A0A078ICT8	InterPro:ANTH_dom
EnsemblPlants:CDY47927	ProteinID:CDY47927	ProteinID:CDY47927.1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSBRNA2T00088538001	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF56
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0004EECA6F	SEG:seg	:

Description

BnaA02g08290DBnaA02g08290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICT8]

Coordinates

chrLK032745:+:34352..36901

Molecular Weight (calculated)

57632.1 Da

IEP (calculated)

5.339

GRAVY (calculated)

-0.609

Length

505 amino acids

Sequence
(BLAST)

001: MGTFTSLRKA YGALKDSTTV GLAKVNSEFK DLDIAIVKAT NHVESPPKER HVRKIFSATS VIQPRADIAY CIHALSKRLS RTRTWVVAMK VLIVIHRTLR
101: EGDPTFREEL LNYSHRRHIL RISNFKDDTS PRGGSWDCSA WVRTYALFLE ERLECYRVLK YDIEAERLPK ASGAASKTHR TRMLSGEDLL EQLPALQQLL
201: FRLIGCQPEG AAYSNYLIQY ALALVLKESF KIYCAINDGI INLVDMFFEM TRHDAVKALN IYKRAGQQAE NLAEFYDYCK GLELARNFQF PTLRQPPPSF
301: LATMEEYIKE APQSGSVQKK LEYEEKEEEQ EPQEEVQPEE PEEDENQNKN TKNGQPLIKE EQEEPQEEKA EEEAEPSPLI DTDDLLGLNE INPQAAEIEE
401: KNALALAIYP PGHKTSGPSN SLSLIEAGGS GWELALVTPQ NNNNNNNNNP RPTIATKLSL RRRHSEKADP INQCWLWIWS HCNNWRTSII EPEPVWDATR
501: SFCNV

Best Arabidopsis Sequence Match ( AT5G57200.1 )
(BLAST)

001: MGTFTSFRKA YGALKDTTTV GLAKVNSEFK DLDIAIVKAT NHVESPPKER HVRKIFSATS VIQPRADVAY CIHALSKRLS KTRNWVVAMK VLIVIHRTLR
101: EGDPTFREEL LNYSHRRHIL RISNFKDDTS PLAWDCSAWV RTYALFLEER LECYRVLKYD IEAERLPKAS GAASKTHRTR MLSGEDLLEQ LPALQQLLYR
201: LIGCQPEGAA YSNYLIQYAL ALVLKESFKI YCAINDGIIN LVDMFFEMSR HDAVKALNIY KRAGQQAENL AEFYDYCKGL ELARNFQFPT LRQPPPSFLA
301: TMEEYIKEAP QSGSVQKKLE YQEKEEEEQE QEEEQPEEPA EEENQNENTE NDQPLIEEEE EEPKEEIEVE EAKPSPLIDT DDLLGLHEIN PKAAEIEQNN
401: AFSLAIYPPG HETSAPSNSL SLIEAGGSGW ELALVTPQNN NNNNNNPRPV IATKLGGGFD NLLLDSLYED DTARRQIQLT NAGYGFGATA IPGALASSNP
501: NPFGVQQDPF AMSNNMAPPT NVQMAMQQQQ MMMMNNQSPY NNNYSPYHHH QFSPNPSTSS SPNPFGDPFL ALPAPPSSTT QQQYSPNHML L

Arabidopsis Description

Putative clathrin assembly protein At5g57200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.