Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76760 | Canola | cytosol | 84.87 | 94.86 |
| CDX76976 | Canola | cytosol | 86.78 | 76.39 |
| CDY35361 | Canola | cytosol | 86.02 | 75.97 |
| CDY11530 | Canola | cytosol | 83.72 | 75.34 |
| AT2G25430.1 | Thale cress | cytosol | 87.93 | 70.29 |
| CDX68831 | Canola | cytosol | 75.67 | 66.84 |
| CDX75232 | Canola | cytosol | 75.67 | 66.61 |
| Zm00001d030399_P001 | Maize | cytosol | 41.76 | 62.29 |
| KRH52429 | Soybean | endoplasmic reticulum | 74.71 | 60.84 |
| KRH61760 | Soybean | mitochondrion | 73.75 | 59.05 |
| Solyc06g011450.1.1 | Tomato | cytosol | 68.39 | 58.14 |
| Zm00001d046121_P001 | Maize | cytosol | 39.66 | 57.02 |
| VIT_04s0008g05540.t01 | Wine grape | cytosol | 72.41 | 57.01 |
| PGSC0003DMT400040963 | Potato | cytosol | 69.92 | 56.94 |
| PGSC0003DMT400035762 | Potato | cytosol | 68.58 | 56.02 |
| Solyc08g059660.1.1 | Tomato | cytosol | 68.01 | 55.82 |
| TraesCS4D01G208100.1 | Wheat | cytosol, mitochondrion, plastid | 58.81 | 54.82 |
| Os03t0275500-01 | Rice | plasma membrane | 65.9 | 52.84 |
| TraesCS4B01G207200.1 | Wheat | cytosol, mitochondrion, plastid | 64.18 | 52.51 |
| EER92480 | Sorghum | cytosol, mitochondrion, plastid | 64.75 | 52.4 |
| Zm00001d047804_P001 | Maize | plasma membrane | 63.41 | 52.21 |
| TraesCS4A01G097200.1 | Wheat | cytosol, mitochondrion, plastid | 63.6 | 52.04 |
| HORVU4Hr1G059660.3 | Barley | cytosol, mitochondrion, plastid | 63.98 | 51.7 |
| Zm00001d028620_P001 | Maize | plasma membrane | 63.22 | 51.64 |
| GSMUA_Achr9P03950_001 | Banana | cytosol, mitochondrion, plastid | 46.55 | 46.11 |
| Os05t0112101-01 | Rice | plasma membrane | 47.13 | 42.34 |
| TraesCS1D01G036500.1 | Wheat | cytosol | 49.81 | 42.07 |
| TraesCS1A01G035100.1 | Wheat | cytosol | 49.43 | 41.88 |
| TraesCS1B01G044800.1 | Wheat | cytosol | 49.23 | 41.59 |
| HORVU1Hr1G005290.1 | Barley | cytosol | 49.04 | 41.42 |
| CDX89917 | Canola | cytosol | 37.16 | 41.36 |
| CDY18145 | Canola | cytosol | 36.78 | 41.2 |
| GSMUA_Achr11P... | Banana | cytosol | 35.25 | 40.35 |
| CDY37444 | Canola | nucleus | 21.46 | 39.86 |
| GSMUA_Achr6P33420_001 | Banana | cytosol, mitochondrion, plastid | 47.32 | 39.08 |
| Zm00001d035652_P001 | Maize | cytosol | 44.25 | 38.69 |
| EES18894 | Sorghum | cytosol | 45.79 | 38.36 |
| CDY15448 | Canola | mitochondrion | 36.97 | 33.74 |
| CDY32494 | Canola | mitochondrion | 36.21 | 33.04 |
| CDY21904 | Canola | mitochondrion | 36.97 | 32.22 |
| CDY22070 | Canola | mitochondrion | 36.97 | 32.06 |
| CDY18283 | Canola | cytosol, nucleus, peroxisome | 19.92 | 21.67 |
| CDY71126 | Canola | cytosol, mitochondrion | 17.05 | 20.89 |
| CDY53396 | Canola | cytosol | 23.75 | 20.84 |
| CDY12401 | Canola | cytosol, mitochondrion | 21.46 | 20.74 |
| CDY15531 | Canola | cytosol, golgi, nucleus | 23.95 | 20.49 |
| CDY41768 | Canola | cytosol, mitochondrion | 15.52 | 20.35 |
| CDY52732 | Canola | cytosol | 22.61 | 20.17 |
| CDY38276 | Canola | cytosol | 22.61 | 19.93 |
| CDY17660 | Canola | cytosol | 21.07 | 19.26 |
| CDY09433 | Canola | cytosol, mitochondrion | 21.26 | 19.24 |
| CDY04095 | Canola | cytosol | 20.69 | 18.91 |
| CDY36239 | Canola | cytosol | 20.69 | 18.91 |
| CDY48813 | Canola | cytosol | 21.07 | 18.87 |
| CDX89382 | Canola | cytosol | 21.65 | 18.8 |
| CDX86691 | Canola | cytosol, mitochondrion | 36.4 | 18.79 |
| CDY17459 | Canola | cytosol | 20.5 | 18.77 |
| CDX94400 | Canola | cytosol | 21.26 | 18.62 |
| CDX86594 | Canola | cytosol, golgi, nucleus | 22.61 | 18.15 |
| CDY42239 | Canola | cytosol | 11.69 | 18.1 |
| CDY47927 | Canola | cytosol | 17.24 | 17.82 |
| CDY53525 | Canola | cytosol, mitochondrion | 21.65 | 16.21 |
| CDY45299 | Canola | mitochondrion | 21.26 | 16.13 |
| CDY60368 | Canola | mitochondrion | 11.49 | 15.87 |
| CDY57160 | Canola | mitochondrion | 11.49 | 15.87 |
| CDY03862 | Canola | mitochondrion | 11.3 | 15.49 |
| CDY64692 | Canola | mitochondrion | 10.92 | 15.04 |
| CDY01884 | Canola | mitochondrion | 9.96 | 14.57 |
| CDY12691 | Canola | mitochondrion | 9.96 | 14.29 |
| CDX81471 | Canola | mitochondrion | 9.96 | 14.13 |
| CDX96047 | Canola | mitochondrion | 9.58 | 13.85 |
| CDX93766 | Canola | mitochondrion | 9.77 | 13.75 |
| CDY50184 | Canola | mitochondrion | 9.58 | 13.59 |
| CDY41097 | Canola | cytosol | 8.05 | 12.21 |
| CDY45281 | Canola | cytosol | 7.85 | 11.95 |
| KRH05593 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:22.1.4.6 | GO:A0A078CJS3 | InterPro:ANTH_dom | EnsemblPlants:CDX76977 |
| ProteinID:CDX76977 | ProteinID:CDX76977.1 | InterPro:Clathrin_AP_dom2 | InterPro:ENTH | InterPro:ENTH_VHS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0030136 | GO:GO:0030276 | GO:GO:0048268 | EnsemblPlantsGene:GSBRNA2T00127530001 | InterPro:IPR008942 | InterPro:IPR013809 |
| InterPro:IPR014712 | PFAM:PF07651 | PFscan:PS50942 | PANTHER:PTHR22951 | PANTHER:PTHR22951:SF13 | SUPFAM:SSF89009 |
| UniParc:UPI0004EE9AB8 | SEG:seg | : | : | : | : |
Description
BnaC04g37720D
Coordinates
chrLK031809:+:104453..106659
Molecular Weight (calculated)
58294.7 Da
IEP (calculated)
4.787
GRAVY (calculated)
-0.661
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNMSHFRDE AHSSSWDHSA FVRTYACYLD QMLELALFER KSGSKERLLE SSAKITTSEF NHSNGRGRDD FRSPPQRSYD YENGVSRRTR SYGDVTEMRR
101: RDEKKVATPL PEMPPERLFG KMGHLQRLLD RFLNLRPTGL AKNSRMVLIV LYPIVRESFR LYADICEVLA VLLDKFFDME YTDCVKAFDA YASAAKQIDE
201: LIAFYDWCKE TGVGRSSEYP EVQRITSKLL ETLEEFVRDR AKRGKSPERK EIEAPPPPPV AEEEEAEPDM NEIKALPPPE NYTPPPQPEP EPEKPQYTED
301: LVNLREDGVT GDDQGNKFAL ALFAGPPGSN GKWEAFPSDG VTSAWQNPAA EPGKADWELA LVETASNLEK QTAALGGGFD SLLLNGMYDQ GAVRQHVSTS
401: QLTGGSASSV ALPLPGKTNT QVLALPAPDG TVEKVNQDPF AASLTIPPPS YVQMAEMEKK QYLLSQEQQL WQQYQREGMR GQASLAKMNN TGPVPGGMPY
501: GMPPVNGMGP PPPTGYYYNN PY
101: RDEKKVATPL PEMPPERLFG KMGHLQRLLD RFLNLRPTGL AKNSRMVLIV LYPIVRESFR LYADICEVLA VLLDKFFDME YTDCVKAFDA YASAAKQIDE
201: LIAFYDWCKE TGVGRSSEYP EVQRITSKLL ETLEEFVRDR AKRGKSPERK EIEAPPPPPV AEEEEAEPDM NEIKALPPPE NYTPPPQPEP EPEKPQYTED
301: LVNLREDGVT GDDQGNKFAL ALFAGPPGSN GKWEAFPSDG VTSAWQNPAA EPGKADWELA LVETASNLEK QTAALGGGFD SLLLNGMYDQ GAVRQHVSTS
401: QLTGGSASSV ALPLPGKTNT QVLALPAPDG TVEKVNQDPF AASLTIPPPS YVQMAEMEKK QYLLSQEQQL WQQYQREGMR GQASLAKMNN TGPVPGGMPY
501: GMPPVNGMGP PPPTGYYYNN PY
001: MAPSIRKAIG AVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDPASEKY IREILNLTSL SRGYILACVT SVSRRLSKTR DWVVALKALM LVHRLLNEGD
101: PIFQEEILYS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAGYLDQRLE LALFERKSGV SVNSGGNSSH HSNNDDRYGR GRDDFRSPPP RSYDYENGGG
201: GGSDFRGDNN GYGGVPKRSR SYGDMTEMGG GGGGGGRDEK KVVTPLREMT PERIFGKMGH LQRLLDRFLS LRPTGLAKNS RMILIALYPV VRESFKLYAD
301: ICEVLAVLLD KFFDMEYSDC VKAFDAYASA AKQIDELIAF YNWCKETGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRG KSPERKEIEA PPPVVEEEEP
401: EPDMNEIKAL PPPENYTPPP PPEPEPQPEK PQFTEDLVNL REDEVTADDQ GNKFALALFA GPPGNNGKWE AFSSNGVTSA WQNPAAEPGK ADWELALVET
501: TSNLEKQTAA LGGGFDNLLL NGMYDQGMVR QHVSTSQLTG GSASSVALPL PGKTNNQVLA LPAPDGTVEK VNQDPFAASL TIPPPSYVQM AEMEKKQYLL
601: SQEQQLWQQY QRDGMRGQAS LAKMNTGPVP AYGMPPVNGM GPPPTGYYYN NPY
101: PIFQEEILYS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAGYLDQRLE LALFERKSGV SVNSGGNSSH HSNNDDRYGR GRDDFRSPPP RSYDYENGGG
201: GGSDFRGDNN GYGGVPKRSR SYGDMTEMGG GGGGGGRDEK KVVTPLREMT PERIFGKMGH LQRLLDRFLS LRPTGLAKNS RMILIALYPV VRESFKLYAD
301: ICEVLAVLLD KFFDMEYSDC VKAFDAYASA AKQIDELIAF YNWCKETGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRG KSPERKEIEA PPPVVEEEEP
401: EPDMNEIKAL PPPENYTPPP PPEPEPQPEK PQFTEDLVNL REDEVTADDQ GNKFALALFA GPPGNNGKWE AFSSNGVTSA WQNPAAEPGK ADWELALVET
501: TSNLEKQTAA LGGGFDNLLL NGMYDQGMVR QHVSTSQLTG GSASSVALPL PGKTNNQVLA LPAPDGTVEK VNQDPFAASL TIPPPSYVQM AEMEKKQYLL
601: SQEQQLWQQY QRDGMRGQAS LAKMNTGPVP AYGMPPVNGM GPPPTGYYYN NPY
Arabidopsis Description
Putative clathrin assembly protein At2g25430 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF20]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.