Factsheet for TraesCS1B01G044800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G036500.1	Wheat	cytosol	94.66	94.66
TraesCS1A01G035100.1	Wheat	cytosol	94.34	94.64
HORVU1Hr1G005290.1	Barley	cytosol	90.78	90.78
Os05t0112101-01	Rice	plasma membrane	67.48	71.77
EES18894	Sorghum	cytosol	65.05	64.53
Zm00001d035652_P001	Maize	cytosol	62.14	64.32
CDY35361	Canola	cytosol	52.27	54.65
CDX68831	Canola	cytosol	51.94	54.31
CDX76976	Canola	cytosol	52.1	54.3
CDX75232	Canola	cytosol	51.78	53.96
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	55.34	53.6
CDY11530	Canola	cytosol	50.16	53.45
PGSC0003DMT400079380	Potato	cytosol, mitochondrion, plastid	51.78	51.95
Bra011333.1-P	Field mustard	cytosol	52.59	51.83
KRH52429	Soybean	endoplasmic reticulum	53.72	51.79
GSMUA_Achr9P03950_001	Banana	cytosol, mitochondrion, plastid	44.01	51.61
VIT_11s0016g05480.t01	Wine grape	cytosol	52.75	51.5
Solyc07g008060.1.1	Tomato	cytosol	50.97	51.3
Bra007800.1-P	Field mustard	cytosol	50.49	50.9
AT4G32285.2	Thale cress	cytosol	52.27	50.87
PGSC0003DMT400035762	Potato	cytosol	52.59	50.86
KRH61760	Soybean	mitochondrion	53.56	50.77
PGSC0003DMT400040963	Potato	cytosol	52.59	50.7
GSMUA_Achr11P...	Banana	cytosol	37.38	50.66
Bra034252.1-P	Field mustard	cytosol	53.07	50.54
Solyc08g059660.1.1	Tomato	cytosol	51.78	50.31
VIT_04s0008g05540.t01	Wine grape	cytosol	53.56	49.92
Solyc06g011450.1.1	Tomato	cytosol	49.35	49.67
AT2G25430.1	Thale cress	cytosol	52.27	49.46
KRH20132	Soybean	cytosol	48.87	49.35
CDX76977	Canola	cytosol	41.59	49.23
CDX76760	Canola	cytosol	37.05	49.04
GSMUA_Achr6P33420_001	Banana	cytosol, mitochondrion, plastid	41.91	40.98
KRH05593	Soybean	cytosol	5.66	40.7
TraesCS1B01G277200.1	Wheat	cytosol	38.51	39.34
TraesCS7B01G430700.2	Wheat	cytosol	7.44	32.17
TraesCS7B01G322300.1	Wheat	mitochondrion	26.38	28.85
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	26.05	28.55
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	25.57	28.11
TraesCS7B01G393800.2	Wheat	cytosol	25.57	27.72
TraesCS7B01G040500.1	Wheat	cytosol	24.92	27.3
TraesCS6B01G181800.1	Wheat	cytosol	23.79	25.48
TraesCS6B01G407500.2	Wheat	cytosol	23.62	24.7
TraesCS5B01G296700.1	Wheat	mitochondrion	13.59	21.99
TraesCS4B01G088300.1	Wheat	mitochondrion	12.14	18.99

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	ncoils:Coil
InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543
GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268
InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF23	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:TraesCS1B01G044800	EnsemblPlants:TraesCS1B01G044800.1
TIGR:cd03564	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:24786129..24788342

Molecular Weight (calculated)

65917.8 Da

IEP (calculated)

6.431

GRAVY (calculated)

-0.199

Length

618 amino acids

Sequence
(BLAST)

001: MSIRKALGAV KDQATIGIAK VSSAVAPDLD VAIVRATAHD DGPPDERHVQ EVLRLTSGSS RVHVAACVAT VSRRLARTRD YVVAAKCLAL LHRLVADGDP
101: HFRHELVRPA VSAGRRGGVG GAPVLAALSD FRDEAHSASW DHSAFVRAYA LYLDDRVRFL LALLPAPRTV RFADHDGYAY GGRAAGGASP PPDMTVSVHD
201: MDVEGLLARG QQLRQLIDRF LACRPTGAAR RSRVVLATLW PVVKESGRLY EDVAVVLAVL LDRFFDMEYP ECVKAFEAHV STARLVDDLL AFYSWCDDAG
301: VARSSDFPEV KRIDDKLLET LEQFVRERGR AGQNSPPPRQ AQHAVHDEHH QAEYDMNGIK ALPALEQINA ATVPRPEPAK ASVAPVARAA DQTNDLVDLR
401: ESAAAADEQG NKLALALFSE QPQSANGSWV AFPSDDGAPN PKATTTSAWQ TPAAEPGKAD WELALVETAS NLSRQTAALG GGMDPLLLHG MYDQGAVRQH
501: ARAQAASGSA SSVALPGAPA AHNILALPGP DGAVGGDPFA ASLAVPPPSY VQMAEMERKQ ELLAQEQRMW AQYRQGGMQG QAGLNGLAVG GGGSAFASNT
601: SVPMPMAYHY HGAGAYYY

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.