Factsheet for TraesCS5B01G296700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G297400.1	Wheat	mitochondrion	92.41	93.63
HORVU7Hr1G089710.1	Barley	mitochondrion	38.74	83.62
HORVU5Hr1G078270.1	Barley	cytosol	94.5	81.86
TraesCS5D01G304500.1	Wheat	mitochondrion	93.72	81.0
Os08t0467300-01	Rice	mitochondrion	69.37	66.92
EES13983	Sorghum	mitochondrion	67.54	64.18
Zm00001d049990_P001	Maize	mitochondrion	63.61	62.63
Zm00001d031760_P001	Maize	mitochondrion	64.66	50.2
GSMUA_Achr8P22890_001	Banana	mitochondrion	47.12	45.34
GSMUA_Achr7P18620_001	Banana	mitochondrion	45.81	45.1
GSMUA_Achr3P20230_001	Banana	mitochondrion	34.29	39.58
GSMUA_Achr7P02390_001	Banana	cytosol	42.93	39.42
CDY64692	Canola	mitochondrion	33.51	33.77
Bra012491.1-P	Field mustard	mitochondrion	33.25	33.6
CDY57160	Canola	mitochondrion	32.98	33.33
Bra024772.1-P	Field mustard	mitochondrion	32.72	33.16
CDY03862	Canola	mitochondrion	32.98	33.07
CDX81471	Canola	mitochondrion	31.68	32.88
CDY60368	Canola	mitochondrion	32.46	32.8
Bra033960.1-P	Field mustard	mitochondrion	31.15	32.69
CDY12691	Canola	mitochondrion	31.15	32.69
AT1G25240.2	Thale cress	mitochondrion	32.2	32.63
VIT_01s0011g06370.t01	Wine grape	mitochondrion	30.89	30.65
AT2G01920.1	Thale cress	mitochondrion	24.87	30.45
AT1G14686.1	Thale cress	cytosol	26.7	30.09
AT1G68110.1	Thale cress	mitochondrion	29.84	30.08
KRH42490	Soybean	cytosol	31.68	29.95
CDY01884	Canola	mitochondrion	27.75	29.69
KRH58584	Soybean	mitochondrion	30.63	29.32
CDY45281	Canola	cytosol	26.18	29.15
CDY41097	Canola	cytosol	25.92	28.78
PGSC0003DMT400058608	Potato	mitochondrion	30.1	28.75
Bra004282.1-P	Field mustard	mitochondrion	26.96	28.53
Solyc01g005070.2.1	Tomato	mitochondrion	29.58	28.39
CDX96047	Canola	mitochondrion	26.7	28.25
Bra026195.1-P	Field mustard	cytosol	26.18	28.09
KRG89239	Soybean	cytosol, mitochondrion	26.96	26.82
PGSC0003DMT400075705	Potato	mitochondrion	27.49	26.79
Solyc04g008350.1.1	Tomato	mitochondrion	26.96	26.21
KRH49763	Soybean	mitochondrion	25.13	24.68
TraesCS7B01G430700.2	Wheat	cytosol	6.54	17.48
TraesCS7B01G322300.1	Wheat	mitochondrion	22.51	15.22
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	24.61	14.73
TraesCS4B01G088300.1	Wheat	mitochondrion	14.92	14.43
TraesCS7B01G393800.2	Wheat	cytosol	21.47	14.39
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	20.94	14.18
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	20.42	13.88
TraesCS1B01G277200.1	Wheat	cytosol	21.73	13.72
TraesCS1B01G044800.1	Wheat	cytosol	21.99	13.59
TraesCS7B01G040500.1	Wheat	cytosol	19.37	13.12
TraesCS6B01G181800.1	Wheat	cytosol	19.11	12.65
TraesCS6B01G407500.2	Wheat	cytosol	17.8	11.51

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF19
SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:TraesCS5B01G296700	EnsemblPlants:TraesCS5B01G296700.1	SEG:seg	:

Description

No Description!

Coordinates

chr5B:-:479777388..479778536

Molecular Weight (calculated)

41977.0 Da

IEP (calculated)

6.026

GRAVY (calculated)

-0.251

Length

382 amino acids

Sequence
(BLAST)

001: MTTARQWWRR AAAAAKDKKS LCLTRAAGAL RSPARVRGGA AELDAAVIRA TSHDDRFVDR GAAARVLDLA RASSPSPLVW ALAHRAGRTR CWAVALKALM
101: LAHRLLLLAQ PRARGRVPFD LADFRDRSSA GFSALVRAYF RFLDARSLFA AEEDDGAGAN GDEDEDDEET RLLDRLSRRQ HLLDLLMQIR PYGDGMERQS
201: LVLDAMECAV VEIFDVYGQV RAGIAEYLVA VGGSTPTTPT PRPRPGETVA TARRRRAMQG VRVLRKETEQ SALVSSYFEL CRTLGVLSAA EFPAVERVPD
301: HDIRDLEKLI MAHVEDGGCM VEQDNEPKAL VGPMEDAGVA STTVAMKEWM VFDDDAGTGL RQGQFGDYVN PFLTNLTEFG ET

Best Arabidopsis Sequence Match ( AT1G25240.2 )
(BLAST)

001: MMKLWKRASG ALKDRKTLFT IGFSRKTSFR NPDLDSAIIH ATSHDDSSVD YHNAHRVYKW IRSSPANLKP LVHALSSRVN RTRSWIVALK ALMLVHGVLC
101: CKVTSLQEIR RLPFDLSDFS DGHSRPSKTW GFNAFIRAYF SFLDQYSFFL SDQIRRRHKK PQLDSVNQEL ERIEKLQSLL HMLLQIRPMA DNMKKTLILE
201: AMDCVVIEIF DIYGRICSAI AKLLIKIHPA AGKAEAVIAL KIVKKATSQG EDLALYFEFC KEFGVSNAHD IPKFVTIPEE DIKAIEKVIN GVEEEEVKKK
301: EDEVEEEKSI ILVERPELQT IITDKWEIFE DDFCFTCKDI KETDQHRKFN MDPSPLPLIV IDEPVYFTHT LPDLITF

Arabidopsis Description

ENTH/VHS/GAT family protein [Source:TAIR;Acc:AT1G25240]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.