Factsheet for Bra004282.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96047	Canola	mitochondrion	99.45	99.45
Bra033960.1-P	Field mustard	mitochondrion	77.84	77.2
AT1G68110.1	Thale cress	mitochondrion	76.18	72.56
Bra012491.1-P	Field mustard	mitochondrion	63.43	60.58
Bra024772.1-P	Field mustard	mitochondrion	62.05	59.42
VIT_01s0011g06370.t01	Wine grape	mitochondrion	44.32	41.56
Solyc01g005070.2.1	Tomato	mitochondrion	42.38	38.44
PGSC0003DMT400058608	Potato	mitochondrion	42.38	38.25
KRH58584	Soybean	mitochondrion	40.17	36.34
KRH42490	Soybean	cytosol	39.89	35.64
PGSC0003DMT400075705	Potato	mitochondrion	38.5	35.46
Solyc04g008350.1.1	Tomato	mitochondrion	37.95	34.86
Bra026195.1-P	Field mustard	cytosol	34.35	34.83
KRG89239	Soybean	cytosol, mitochondrion	36.57	34.38
KRH49763	Soybean	mitochondrion	35.46	32.9
EES13983	Sorghum	mitochondrion	36.57	32.84
GSMUA_Achr7P18620_001	Banana	mitochondrion	35.18	32.73
Os08t0467300-01	Rice	mitochondrion	35.18	32.07
Zm00001d049990_P001	Maize	mitochondrion	33.8	31.44
EER96828	Sorghum	mitochondrion	34.07	30.6
Zm00001d005869_P001	Maize	mitochondrion	33.24	30.15
GSMUA_Achr8P22890_001	Banana	mitochondrion	32.13	29.22
GSMUA_Achr3P20230_001	Banana	mitochondrion	26.04	28.4
GSMUA_Achr7P02390_001	Banana	cytosol	32.41	28.12
TraesCS5A01G297400.1	Wheat	mitochondrion	28.53	27.32
TraesCS5B01G296700.1	Wheat	mitochondrion	28.53	26.96
Zm00001d031760_P001	Maize	mitochondrion	33.52	24.59
HORVU5Hr1G078270.1	Barley	cytosol	29.09	23.81
HORVU7Hr1G089710.1	Barley	mitochondrion	11.36	23.16
TraesCS5D01G304500.1	Wheat	mitochondrion	28.25	23.08
Bra028000.1-P	Field mustard	mitochondrion	18.01	17.52
Bra002750.1-P	Field mustard	cytosol	24.1	14.67
Bra020460.1-P	Field mustard	cytosol	24.1	14.65
Bra030518.1-P	Field mustard	mitochondrion	23.82	14.58
Bra024871.1-P	Field mustard	cytosol	22.71	14.36
Bra017439.1-P	Field mustard	cytosol	22.71	14.36
Bra032561.1-P	Field mustard	mitochondrion	23.55	14.24
Bra011333.1-P	Field mustard	cytosol	24.1	13.88
Bra038937.1-P	Field mustard	mitochondrion	20.78	13.64
Bra007800.1-P	Field mustard	cytosol	22.99	13.54
Bra036250.1-P	Field mustard	mitochondrion	22.44	13.48
Bra013934.1-P	Field mustard	cytosol	22.44	13.48
Bra034252.1-P	Field mustard	cytosol	24.1	13.41
Bra033369.1-P	Field mustard	cytosol	15.79	12.15
Bra030600.1-P	Field mustard	cytosol, golgi, nucleus	21.33	11.94
Bra026179.1-P	Field mustard	cytosol, mitochondrion	25.21	11.88
Bra015381.1-P	Field mustard	cytosol	19.94	11.3
Bra026647.1-P	Field mustard	cytosol	22.44	11.25

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	EnsemblPlantsGene:Bra004282	EnsemblPlants:Bra004282.1
EnsemblPlants:Bra004282.1-P	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	UniProt:M4CJ98
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF19	SMART:SM00273	SUPFAM:SSF48464
SUPFAM:SSF89009	UniParc:UPI00025416DD	SEG:seg	:	:	:

Description

AT1G68110 (E=5e-141) | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related

Coordinates

chrA07:+:17766288..17767373

Molecular Weight (calculated)

41339.1 Da

IEP (calculated)

8.086

GRAVY (calculated)

-0.139

Length

361 amino acids

Sequence
(BLAST)

001: MKLWKRAAAA IKDRKSLLAV GFSRRTSHHN LDLEAAIIKA TSHDSSSVDY SNAHRVYKWI RSSPHLNLKT LIHTLSSRVS HTRSWIVSLK SLMLLHGVIS
101: CKLPSVLGEL RRLPFDLSDF SDGHSCLSKT WGFNIFVRAY YAFLHSYASF LSDQFHRRPV NRRSSVNQET ERIQKLQSLL ELILQIRPIA DNMKRTLILE
201: AMDCIVIESI NIYGRICSGV IRMLPSSGKA DAAATLKIIN KATSQGEDLA VYFEFCKGFG VPNARDTPQF VSIPKAEVET IKNMIENVGE EEVVEEEKAM
301: VVLEKPRLET IITEKWEIFE DDECCFHEKV IKEYQKHTLP LIVSYQEPVY IEYMMPDLIT F

Best Arabidopsis Sequence Match ( AT1G68110.1 )
(BLAST)

001: MKLWKRAAAA IKDRKSLLAV GFSRRNSSYR NADLEAAIIK ATSHDDSSVD YSNAHRVYKW IRSSPLNLKT LVYAISSRVN HTRSWIVALK SLMLLHGVLC
101: CKVPSVVGEF RRLPFDLSDF SDGHSCLSKT WGFNVFVRTY FAFLHHYSSF LSDQIHRLRG NNRRSLEKTS DSVIQELERI QKLQSLLDMI LQIRPVADNM
201: KKTLILEAMD CLVIESINIY GRICGAVMKV LPLAGKSEAA TVLKIVNKTT SQGEDLIVYF EFCKGFGVSN AREIPQFVRI PEEEVEAIEK MIDTVQEKPK
301: LEKDEEKEDE KAMVVLEQPK KLQTIITDKW EIFEDDYRCF DRKDKWEIFE DEYHQNHLPL ITMNQPVYIT YTMPDLITF

Arabidopsis Description

Putative clathrin assembly protein At1g68110 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.