Factsheet for VIT_01s0011g06370.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g005070.2.1	Tomato	mitochondrion	51.43	49.75
Bra024772.1-P	Field mustard	mitochondrion	48.57	49.6
PGSC0003DMT400058608	Potato	mitochondrion	51.43	49.5
CDY57160	Canola	mitochondrion	48.57	49.47
AT1G25240.2	Thale cress	mitochondrion	48.31	49.34
CDY64692	Canola	mitochondrion	48.05	48.81
Bra012491.1-P	Field mustard	mitochondrion	47.79	48.68
CDY60368	Canola	mitochondrion	47.79	48.68
CDY03862	Canola	mitochondrion	48.05	48.56
KRH42490	Soybean	cytosol	49.09	46.78
KRH58584	Soybean	mitochondrion	48.05	46.37
PGSC0003DMT400075705	Potato	mitochondrion	46.75	45.92
Solyc04g008350.1.1	Tomato	mitochondrion	46.75	45.8
CDY12691	Canola	mitochondrion	43.12	45.6
Bra033960.1-P	Field mustard	mitochondrion	43.12	45.6
CDX81471	Canola	mitochondrion	43.12	45.11
CDY01884	Canola	mitochondrion	41.82	45.1
AT1G68110.1	Thale cress	mitochondrion	43.64	44.33
Bra004282.1-P	Field mustard	mitochondrion	41.56	44.32
CDX96047	Canola	mitochondrion	41.3	44.04
KRG89239	Soybean	cytosol, mitochondrion	43.9	44.01
KRH49763	Soybean	mitochondrion	43.64	43.19
AT1G14686.1	Thale cress	cytosol	35.06	39.82
CDY41097	Canola	cytosol	34.29	38.37
CDY45281	Canola	cytosol	34.03	38.19
Bra026195.1-P	Field mustard	cytosol	34.55	37.36
Zm00001d049990_P001	Maize	mitochondrion	37.14	36.86
GSMUA_Achr7P18620_001	Banana	mitochondrion	36.88	36.6
Os08t0467300-01	Rice	mitochondrion	37.4	36.36
EES13983	Sorghum	mitochondrion	37.4	35.82
GSMUA_Achr8P22890_001	Banana	mitochondrion	35.84	34.76
AT2G01920.1	Thale cress	mitochondrion	27.27	33.65
EER96828	Sorghum	mitochondrion	34.55	33.08
GSMUA_Achr7P02390_001	Banana	cytosol	34.81	32.21
Zm00001d005869_P001	Maize	mitochondrion	32.99	31.91
TraesCS5B01G296700.1	Wheat	mitochondrion	30.65	30.89
TraesCS5A01G297400.1	Wheat	mitochondrion	29.87	30.5
GSMUA_Achr3P20230_001	Banana	mitochondrion	25.71	29.91
Zm00001d031760_P001	Maize	mitochondrion	36.36	28.46
HORVU5Hr1G078270.1	Barley	cytosol	30.39	26.53
HORVU7Hr1G089710.1	Barley	mitochondrion	11.95	25.99
TraesCS5D01G304500.1	Wheat	mitochondrion	29.61	25.79
VIT_18s0089g01330.t01	Wine grape	cytosol	20.26	19.4
VIT_11s0037g01000.t01	Wine grape	cytosol	23.9	18.04
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	24.16	16.4
VIT_11s0016g05900.t01	Wine grape	cytosol	21.56	16.34
VIT_12s0059g01330.t01	Wine grape	cytosol	23.38	15.23
VIT_04s0008g05540.t01	Wine grape	cytosol	25.19	14.63
VIT_11s0103g00620.t01	Wine grape	cytosol	22.34	14.55
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	21.3	14.09
VIT_11s0016g05480.t01	Wine grape	cytosol	22.6	13.74

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100249246	wikigene:100249246	MapMan:35.1	EMBL:AM431243
InterPro:ANTH_dom	ProteinID:CAN69255	ProteinID:CAN69255.1	ProteinID:CBI26775	ProteinID:CBI26775.3	InterPro:Clathrin_AP_dom2
UniProt:D7T8F4	InterPro:ENTH	InterPro:ENTH_VHS	EMBL:FN595752	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	EntrezGene:LOC100249246
wikigene:LOC100249246	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF19	SUPFAM:SSF48464
SUPFAM:SSF89009	UniParc:UPI0001982947	ArrayExpress:VIT_01s0011g06370	EnsemblPlantsGene:VIT_01s0011g06370	EnsemblPlants:VIT_01s0011g06370.t01	RefSeq:XP_002281710
RefSeq:XP_002281710.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:6168519..6169676

Molecular Weight (calculated)

43762.2 Da

IEP (calculated)

9.193

GRAVY (calculated)

-0.311

Length

385 amino acids

Sequence
(BLAST)

001: MKLWNRASGN LKDRNSIWMA SISRRSPNRN PDLEAAIIRA TSHDETYVDY RNAQRVFAWV KTSPAYLKPL IWALSKRMEK TRSWVVALKG LMLMHGVFCC
101: KIPIMEKIGR LPFDLSNFSD GHSHLCKTWG FNSFIRSYFA FLDQRAFWLD MDTKEDEEQT QKTNESMLQE LIKLQQWQTL LDMLLQIKPE AAQMNVGLIL
201: EAMDCIIIEI FDIYSRICNG VARILVKIHA AGKVEANMAL KVLRKATAQG DRLSLYFELC KNLGVRNASK FSKVEKIPQE DIRELEQIIN GVLEDKAIVV
301: RQKGSIEEGK GTEGSPKTVI SKKWERFDEQ LRGNKEGIGA PDGGKMIVAQ NPSTATCNSR PHAHQPLPDL ITGLFPPAQI LENVQ

Best Arabidopsis Sequence Match ( AT1G25240.2 )
(BLAST)

001: MMKLWKRASG ALKDRKTLFT IGFSRKTSFR NPDLDSAIIH ATSHDDSSVD YHNAHRVYKW IRSSPANLKP LVHALSSRVN RTRSWIVALK ALMLVHGVLC
101: CKVTSLQEIR RLPFDLSDFS DGHSRPSKTW GFNAFIRAYF SFLDQYSFFL SDQIRRRHKK PQLDSVNQEL ERIEKLQSLL HMLLQIRPMA DNMKKTLILE
201: AMDCVVIEIF DIYGRICSAI AKLLIKIHPA AGKAEAVIAL KIVKKATSQG EDLALYFEFC KEFGVSNAHD IPKFVTIPEE DIKAIEKVIN GVEEEEVKKK
301: EDEVEEEKSI ILVERPELQT IITDKWEIFE DDFCFTCKDI KETDQHRKFN MDPSPLPLIV IDEPVYFTHT LPDLITF

Arabidopsis Description

ENTH/VHS/GAT family protein [Source:TAIR;Acc:AT1G25240]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.