Factsheet for Zm00001d031760_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13983	Sorghum	mitochondrion	70.12	85.82
Zm00001d049990_P001	Maize	mitochondrion	65.45	82.99
Os08t0467300-01	Rice	mitochondrion	64.43	80.05
TraesCS5A01G297400.1	Wheat	mitochondrion	50.2	65.52
TraesCS5B01G296700.1	Wheat	mitochondrion	50.2	64.66
TraesCS5D01G304500.1	Wheat	mitochondrion	53.66	59.73
HORVU5Hr1G078270.1	Barley	cytosol	53.46	59.64
HORVU7Hr1G089710.1	Barley	mitochondrion	20.33	56.5
Zm00001d005869_P001	Maize	mitochondrion	41.87	51.76
GSMUA_Achr8P22890_001	Banana	mitochondrion	40.45	50.13
GSMUA_Achr7P18620_001	Banana	mitochondrion	39.43	50.0
GSMUA_Achr7P02390_001	Banana	cytosol	39.23	46.39
GSMUA_Achr3P20230_001	Banana	mitochondrion	30.49	45.32
CDY64692	Canola	mitochondrion	29.47	38.26
Bra012491.1-P	Field mustard	mitochondrion	29.27	38.1
CDY03862	Canola	mitochondrion	29.07	37.53
CDY57160	Canola	mitochondrion	28.25	36.77
VIT_01s0011g06370.t01	Wine grape	mitochondrion	28.46	36.36
AT1G25240.2	Thale cress	mitochondrion	27.85	36.34
Bra024772.1-P	Field mustard	mitochondrion	27.85	36.34
CDY12691	Canola	mitochondrion	26.63	35.99
Bra033960.1-P	Field mustard	mitochondrion	26.63	35.99
CDY60368	Canola	mitochondrion	27.64	35.98
CDX81471	Canola	mitochondrion	26.83	35.87
CDY01884	Canola	mitochondrion	25.0	34.45
KRH42490	Soybean	cytosol	28.05	34.16
CDY45281	Canola	cytosol	23.78	34.11
KRH58584	Soybean	mitochondrion	27.64	34.09
AT1G68110.1	Thale cress	mitochondrion	26.22	34.04
AT1G14686.1	Thale cress	cytosol	23.37	33.92
PGSC0003DMT400058608	Potato	mitochondrion	27.44	33.75
Solyc01g005070.2.1	Tomato	mitochondrion	27.24	33.67
Bra004282.1-P	Field mustard	mitochondrion	24.59	33.52
CDY41097	Canola	cytosol	23.37	33.43
CDX96047	Canola	mitochondrion	24.39	33.24
Bra026195.1-P	Field mustard	cytosol	23.78	32.87
AT2G01920.1	Thale cress	mitochondrion	20.73	32.69
PGSC0003DMT400075705	Potato	mitochondrion	26.02	32.65
Solyc04g008350.1.1	Tomato	mitochondrion	25.81	32.32
KRG89239	Soybean	cytosol, mitochondrion	24.8	31.77
KRH49763	Soybean	mitochondrion	23.78	30.08
Zm00001d046121_P001	Maize	cytosol	16.87	22.86
Zm00001d030399_P001	Maize	cytosol	13.82	19.43
Zm00001d047804_P001	Maize	plasma membrane	22.15	17.19
Zm00001d028620_P001	Maize	plasma membrane	21.54	16.59
Zm00001d035652_P001	Maize	cytosol	20.12	16.58
Zm00001d049002_P001	Maize	mitochondrion	13.62	16.54
Zm00001d007272_P001	Maize	mitochondrion	13.21	16.46
Zm00001d038892_P001	Maize	mitochondrion	18.5	16.16
Zm00001d037484_P002	Maize	cytosol, mitochondrion	17.28	15.43
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	17.89	15.12
Zm00001d010228_P001	Maize	cytosol	18.09	14.47
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	16.06	14.23
Zm00001d045154_P002	Maize	mitochondrion	17.07	14.05
Zm00001d036672_P005	Maize	cytosol	16.06	13.74
Zm00001d015430_P001	Maize	cytosol	15.65	13.34
Zm00001d052008_P003	Maize	cytosol	14.84	13.2
Zm00001d043773_P003	Maize	cytosol	16.67	13.08
Zm00001d047867_P001	Maize	cytosol	7.11	10.64

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	UniProt:A0A1D6KL69	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2
InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543
GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268
InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	ProteinID:ONM03636.1	PFAM:PF07651	PFscan:PS50942
PANTHER:PTHR22951	PANTHER:PTHR22951:SF19	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI00022152D4
EnsemblPlantsGene:Zm00001d031760	EnsemblPlants:Zm00001d031760_P001	EnsemblPlants:Zm00001d031760_T001	SEG:seg	:	:

Description

Clathrin assembly protein

Coordinates

chr1:+:201015465..201016943

Molecular Weight (calculated)

54277.3 Da

IEP (calculated)

10.081

GRAVY (calculated)

-0.133

Length

492 amino acids

Sequence
(BLAST)

001: MPSFVSPPTP RYCLTRSWRI VSLPAIPCRS AVNFLGLTTL FLRDFISARS SSGQERLWRG VELATVVDLI FPGRLEHSGA GEGGDARWWR CAGGQKMTTA
101: RQWWRRAAAA VKDRRSLYLT RVVALRPRPV SGVATPALRS PKLEAAVIRA TSHDERSVDH GSAARVFALA RASPPSLQPL MWALARRARR TRCWAVALKA
201: LVLAHGLLLR SDVAPRAARL GRVPFDLADF RDRSSPPSKS SGFSAFVRAY FRFLDTRSLF TAQELDAANS GEADGEDARL DSVTKLQHLL DLLMQIRPYG
301: DGVQQGLILE AMDCVVIEIF EVNSQICTGI ARFLVAVLGS APTTPRARPG ETLAAARRRR GVQGMRVLRK AAEQSAQLSS YLELCRDLGV LNAAEFPAVE
401: RVSDDDIRDL EKIIMNHVVE ERGKDVEKET KALVAVEETR LASKTVVTKE WVVFDDDDND AAGARPRSLG SYMNPFMAAP WDTVACSRDL LV

Best Arabidopsis Sequence Match ( AT1G25240.2 )
(BLAST)

001: MMKLWKRASG ALKDRKTLFT IGFSRKTSFR NPDLDSAIIH ATSHDDSSVD YHNAHRVYKW IRSSPANLKP LVHALSSRVN RTRSWIVALK ALMLVHGVLC
101: CKVTSLQEIR RLPFDLSDFS DGHSRPSKTW GFNAFIRAYF SFLDQYSFFL SDQIRRRHKK PQLDSVNQEL ERIEKLQSLL HMLLQIRPMA DNMKKTLILE
201: AMDCVVIEIF DIYGRICSAI AKLLIKIHPA AGKAEAVIAL KIVKKATSQG EDLALYFEFC KEFGVSNAHD IPKFVTIPEE DIKAIEKVIN GVEEEEVKKK
301: EDEVEEEKSI ILVERPELQT IITDKWEIFE DDFCFTCKDI KETDQHRKFN MDPSPLPLIV IDEPVYFTHT LPDLITF

Arabidopsis Description

ENTH/VHS/GAT family protein [Source:TAIR;Acc:AT1G25240]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.