Factsheet for Zm00001d043773_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01312	Sorghum	cytosol	83.73	93.25
Os01t0694900-01	Rice	cytosol	73.52	81.16
TraesCS3A01G258900.1	Wheat	cytosol	69.86	78.35
TraesCS3D01G259000.2	Wheat	cytosol	70.18	78.15
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	70.02	78.11
Zm00001d038892_P001	Maize	mitochondrion	69.54	77.44
GSMUA_Achr9P21890_001	Banana	cytosol	62.36	69.82
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	64.75	69.76
GSMUA_Achr4P13420_001	Banana	cytosol	58.69	68.91
KRH42533	Soybean	cytosol	58.05	64.08
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	57.74	63.84
KRH58627	Soybean	nucleus	57.74	63.62
PGSC0003DMT400075923	Potato	cytosol	56.62	63.06
KRH38239	Soybean	cytosol	55.66	63.0
Solyc04g007860.2.1	Tomato	cytosol, plastid	56.3	62.7
CDY17660	Canola	cytosol	53.91	59.19
Bra024871.1-P	Field mustard	cytosol	53.91	59.19
CDY36239	Canola	cytosol	53.59	58.84
AT2G01600.1	Thale cress	cytosol, mitochondrion	53.43	58.67
CDY09433	Canola	cytosol, mitochondrion	53.27	57.89
CDY48813	Canola	cytosol	53.75	57.8
CDY04095	Canola	cytosol	52.63	57.79
Bra017439.1-P	Field mustard	cytosol	52.63	57.79
CDY17459	Canola	cytosol	52.47	57.72
Zm00001d015430_P001	Maize	cytosol	47.21	51.3
Zm00001d036672_P005	Maize	cytosol	46.25	50.43
Zm00001d037484_P002	Maize	cytosol, mitochondrion	42.11	47.91
AT1G14910.1	Thale cress	mitochondrion	52.63	47.69
Bra026647.1-P	Field mustard	cytosol	53.11	46.25
CDY45299	Canola	mitochondrion	50.72	46.22
CDY53525	Canola	cytosol, mitochondrion	51.2	46.05
Zm00001d045154_P002	Maize	mitochondrion	42.42	44.48
Zm00001d052008_P003	Maize	cytosol	38.44	43.58
Bra026179.1-P	Field mustard	cytosol, mitochondrion	50.72	41.51
Zm00001d030399_P001	Maize	cytosol	15.79	28.29
Zm00001d046121_P001	Maize	cytosol	16.11	27.82
Zm00001d047804_P001	Maize	plasma membrane	26.95	26.66
Zm00001d028620_P001	Maize	plasma membrane	26.48	25.98
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	22.81	25.77
Zm00001d010228_P001	Maize	cytosol	25.2	25.69
Zm00001d035652_P001	Maize	cytosol	24.08	25.29
Zm00001d005869_P001	Maize	mitochondrion	14.51	22.86
Zm00001d049990_P001	Maize	mitochondrion	13.88	22.42
Zm00001d007272_P001	Maize	mitochondrion	12.6	20.0
Zm00001d049002_P001	Maize	mitochondrion	12.44	19.26
Zm00001d047867_P001	Maize	cytosol	8.77	16.72
Zm00001d031760_P001	Maize	mitochondrion	13.08	16.67

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100276465	MapMan:22.1.6.2	UniProt:A0A1D6NES1	InterPro:ANTH_dom
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276
GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	ProteinID:ONM38982.1	PFAM:PF07651
PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF56	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009
UniParc:UPI000844C707	EnsemblPlantsGene:Zm00001d043773	EnsemblPlants:Zm00001d043773_P003	EnsemblPlants:Zm00001d043773_T003	SEG:seg	:

Description

Putative clathrin assembly protein

Coordinates

chr3:-:209660488..209667099

Molecular Weight (calculated)

69742.5 Da

IEP (calculated)

5.360

GRAVY (calculated)

-0.151

Length

627 amino acids

Sequence
(BLAST)

001: MAALQSWRKA YGALKDTTTV SLANLNSDFK DLDVAIVRAT NHVESPPKER HLRKIVAATS IARPQADVTY CIHALARRLA KTRNWIVALK TLVVIHRLLR
101: EGDPAFREEF LTFTQRVRIL QLSNFKDDSS PVAWDYASWV RTYGLFLEEK LECFRVLKYD IEAARLSKQG QGPEKGHSRT TELNSQDLLE QLPALQQLLY
201: RLIGCRAEGA AKNNYLVQYA LAQVLKESFK IYCAINDGII NLIDKFFEMP KHEALKALDV YKRAVHQAGN LSDFYESCQG LELARNFQFP TLREPPQTFL
301: STMEEYVKEA PRMMPVVEPL VISWALVNHL DFCMTPSHFI TSSSLNVVNV THSFWEINDY RQVKFIPADL LIVEWILKYG LSFLFHQELP ERLLLTYKPE
401: EEVHDTVPIV AEKLQVVEEI APVPSSQIAL PPKPEIADTG DLLGLGDSTP TVLAIEESSA LALAILPTGI DNSTTTTQQD SGFDPTGWEL ALVTTSSNAT
501: PLSMESNLGG GFDKLTLDSL YDDGTYRQMQ QQQLYGSAPP NPFMASDPFA VSNQVAPPPS VQMAAMAPQP QHLPMMIEPN PFGPPQQHHA GVAPAANPFL
601: DAGFGAFPAV NGMHPQTNPF GGAAQLL

Best Arabidopsis Sequence Match ( AT1G14910.1 )
(BLAST)

001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL

Arabidopsis Description

Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.