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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY53525 Canola cytosol, mitochondrion 77.89 77.33
CDY45299 Canola mitochondrion 75.87 76.31
AT2G01600.1 Thale cress cytosol, mitochondrion 61.42 74.43
KRH58627 Soybean nucleus 58.09 70.65
KRH42533 Soybean cytosol 57.95 70.6
Bra026179.1-P Field mustard cytosol, mitochondrion 77.75 70.23
VIT_01s0011g05330.t01 Wine grape cytosol, mitochondrion 56.36 68.78
KRH38239 Soybean cytosol 54.62 68.23
Solyc04g007860.2.1 Tomato cytosol, plastid 54.05 66.43
PGSC0003DMT400075923 Potato cytosol 54.05 66.43
Zm00001d038892_P001 Maize mitochondrion 50.29 61.81
GSMUA_Achr4P13420_001 Banana cytosol 47.69 61.8
EES19899 Sorghum cytosol, mitochondrion, plastid 50.14 61.52
GSMUA_Achr9P21890_001 Banana cytosol 49.42 61.07
Os05t0549000-01 Rice plasma membrane 50.0 61.02
TraesCS1D01G375800.1 Wheat cytosol, mitochondrion, plastid 49.71 60.88
TraesCS1B01G388800.1 Wheat cytosol, mitochondrion, plastid 49.57 60.82
TraesCS1A01G369700.1 Wheat cytosol, mitochondrion, plastid 49.57 60.71
Os01t0694900-01 Rice cytosol 49.57 60.39
TraesCS3A01G258900.1 Wheat cytosol 48.27 59.75
EES01312 Sorghum cytosol 48.55 59.68
TraesCS3B01G292000.2 Wheat cytosol, mitochondrion, plastid 48.41 59.61
TraesCS3D01G259000.2 Wheat cytosol 48.27 59.33
Zm00001d009452_P007 Maize cytosol, mitochondrion, plastid 45.52 54.12
HORVU1Hr1G078340.3 Barley plastid 49.42 54.03
Zm00001d043773_P003 Maize cytosol 47.69 52.63
AT5G57200.1 Thale cress cytosol 43.93 51.44
AT4G25940.1 Thale cress cytosol 42.49 48.92
AT5G35200.2 Thale cress cytosol 36.85 46.88
AT4G02650.1 Thale cress mitochondrion 24.71 27.99
AT1G03050.1 Thale cress cytosol, mitochondrion 23.99 27.71
AT4G32285.2 Thale cress cytosol 24.86 27.09
AT2G25430.1 Thale cress cytosol 24.57 26.03
AT1G25240.2 Thale cress mitochondrion 12.43 22.81
AT1G33340.1 Thale cress cytosol, mitochondrion, nucleus 11.99 22.19
AT1G14686.1 Thale cress cytosol 10.84 22.12
AT1G68110.1 Thale cress mitochondrion 11.99 21.9
AT2G01920.1 Thale cress mitochondrion 9.83 21.79
AT1G05020.1 Thale cress cytosol 19.08 20.21
Protein Annotations
Gene3D:1.20.58.150Gene3D:1.25.40.90MapMan:22.1.6.2EntrezGene:838056UniProt:A0A178W3S8ProteinID:AAF79231.1
ProteinID:AEE29241.1InterPro:ANTH_domArrayExpress:AT1G14910EnsemblPlantsGene:AT1G14910RefSeq:AT1G14910TAIR:AT1G14910
RefSeq:AT1G14910-TAIR-GEnsemblPlants:AT1G14910.1TAIR:AT1G14910.1EMBL:AY096496Unigene:At.25101ProteinID:CAA71879.1
InterPro:Clathrin_AP_dom2InterPro:ENTHInterPro:ENTH_VHSGO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005543GO:GO:0005545GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005794GO:GO:0005905GO:GO:0006810GO:GO:0006897GO:GO:0008150GO:GO:0008289
GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0030136GO:GO:0030276GO:GO:0031410
GO:GO:0048268InterPro:IPR008942InterPro:IPR013809InterPro:IPR014712RefSeq:NP_172944.1ProteinID:OAP12714.1
UniProt:P94017PFAM:PF07651PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230
PO:PO:0000293PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS50942PANTHER:PTHR22951
PANTHER:PTHR22951:SF54SMART:SM00273SUPFAM:SSF48464SUPFAM:SSF89009UniParc:UPI00000A6ECDEMBL:Y10863
EMBL:Y10864EMBL:Y10987SEG:seg:::
Description
Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
Coordinates
chr1:-:5139712..5143735
Molecular Weight (calculated)
75519.7 Da
IEP (calculated)
4.517
GRAVY (calculated)
-0.280
Length
692 amino acids
Sequence
(BLAST)
001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.