Factsheet for AT4G32285.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68831	Canola	cytosol	84.09	90.36
Bra011333.1-P	Field mustard	cytosol	89.13	90.27
CDX75232	Canola	cytosol	84.25	90.22
AT2G25430.1	Thale cress	cytosol	84.09	81.78
KRH52429	Soybean	endoplasmic reticulum	77.17	76.44
KRH05593	Soybean	cytosol	10.24	75.58
KRH61760	Soybean	mitochondrion	75.43	73.47
PGSC0003DMT400035762	Potato	cytosol	71.81	71.36
Solyc08g059660.1.1	Tomato	cytosol	71.34	71.23
PGSC0003DMT400040963	Potato	cytosol	71.5	70.83
VIT_04s0008g05540.t01	Wine grape	cytosol	73.7	70.59
Solyc06g011450.1.1	Tomato	cytosol	67.09	69.38
Zm00001d030399_P001	Maize	cytosol	36.85	66.86
TraesCS4D01G208100.1	Wheat	cytosol, mitochondrion, plastid	58.43	66.25
Zm00001d046121_P001	Maize	cytosol	37.32	65.29
GSMUA_Achr9P03950_001	Banana	cytosol, mitochondrion, plastid	52.44	63.19
Zm00001d047804_P001	Maize	plasma membrane	62.83	62.93
EER92480	Sorghum	cytosol, mitochondrion, plastid	63.62	62.64
Zm00001d028620_P001	Maize	plasma membrane	62.83	62.44
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	62.52	62.23
TraesCS4A01G097200.1	Wheat	cytosol, mitochondrion, plastid	62.2	61.91
Os03t0275500-01	Rice	plasma membrane	63.31	61.75
HORVU4Hr1G059660.3	Barley	cytosol, mitochondrion, plastid	62.2	61.15
GSMUA_Achr11P...	Banana	cytosol	41.89	58.33
Os05t0112101-01	Rice	plasma membrane	49.61	54.22
GSMUA_Achr6P33420_001	Banana	cytosol, mitochondrion, plastid	53.23	53.48
TraesCS1B01G044800.1	Wheat	cytosol	50.87	52.27
TraesCS1D01G036500.1	Wheat	cytosol	50.87	52.27
TraesCS1A01G035100.1	Wheat	cytosol	50.55	52.11
HORVU1Hr1G005290.1	Barley	cytosol	49.76	51.13
Zm00001d035652_P001	Maize	cytosol	44.72	47.57
EES18894	Sorghum	cytosol	45.98	46.87
AT1G03050.1	Thale cress	cytosol, mitochondrion	41.73	44.24
AT4G02650.1	Thale cress	mitochondrion	42.2	43.86
AT2G01600.1	Thale cress	cytosol, mitochondrion	26.93	29.95
AT5G57200.1	Thale cress	cytosol	27.56	29.61
AT4G25940.1	Thale cress	cytosol	27.4	28.95
AT5G35200.2	Thale cress	cytosol	24.72	28.86
AT1G05020.1	Thale cress	cytosol	28.5	27.72
AT1G14686.1	Thale cress	cytosol	13.86	25.96
AT1G25240.2	Thale cress	mitochondrion	15.28	25.73
AT1G68110.1	Thale cress	mitochondrion	14.96	25.07
AT1G14910.1	Thale cress	mitochondrion	27.09	24.86
AT1G33340.1	Thale cress	cytosol, mitochondrion, nucleus	14.49	24.6
AT2G01920.1	Thale cress	mitochondrion	11.5	23.4

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.4.6	EntrezGene:829362	ProteinID:AEE86033.1	ProteinID:AEE86034.1
EMBL:AK317226	InterPro:ANTH_dom	ArrayExpress:AT4G32285	EnsemblPlantsGene:AT4G32285	RefSeq:AT4G32285	TAIR:AT4G32285
RefSeq:AT4G32285-TAIR-G	EnsemblPlants:AT4G32285.2	TAIR:AT4G32285.2	EMBL:AY075654	Unigene:At.31676	EMBL:BT022005
ProteinID:CAA16962.1	ProteinID:CAB79946.1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005794	GO:GO:0005829	GO:GO:0005886
GO:GO:0005905	GO:GO:0006810	GO:GO:0006897	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0031410	GO:GO:0048268
GO:GO:0072583	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	RefSeq:NP_001031770.1	RefSeq:NP_567892.1
PFAM:PF07651	PO:PO:0000005	PO:PO:0000293	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF13
UniProt:Q8S9J8	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0000162B67	SEG:seg

Description

Probable clathrin assembly protein At4g32285 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J8]

Coordinates

chr4:+:15585443..15588089

Molecular Weight (calculated)

70558.5 Da

IEP (calculated)

5.990

GRAVY (calculated)

-0.537

Length

635 amino acids

Sequence
(BLAST)

001: MALSMRKAIG VVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDQSSDKY IREILSLTSL SRGYVHACVT SVSRRLKKTR DWIVALKALM LVHRLLNEGD
101: PLFQEEILYA TRRGTRILNM SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERRGRN GGGSSSSHQS NGDDGYNRSR DDFRSPPPRT YDYETGNGFG
201: MPKRSRSFGD VNEIGAREEK KSVTPLREMT PERIFGKMGH LQRLLDRFLS CRPTGLAKNS RMILIAMYPV VKESFRLYAD ICEVLAVLLD KFFDMEYTDC
301: VKAFDAYASA AKQIDELIAF YHWCKDTGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRA KSPERKEIEA PPAPAPPVEE PVDMNEIKAL PPPENHTPPP
401: PPAPEPKPQQ PQVTDDLVNL REDDVSGDDQ GNKFALALFA GPPANNGKWE AFSSDNNVTS AWQNPAAELG KADWELALVE TASNLEHQKA AMGGGLDPLL
501: LNGMYDQGAV RQHVSTSELT GGSSSSVALP LPGKVNSHIL ALPAPDGTVQ KVNQDPFAAS LTIPPPSYVQ MAEMDKKQYL LTQEQQLWQQ YQQEGMRGQA
601: SLAKMNTAQT AMPYGMPPVN GMGPSPMGYY YNNPY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.