Factsheet for TraesCS1D01G036500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G035100.1	Wheat	cytosol	95.15	95.45
TraesCS1B01G044800.1	Wheat	cytosol	94.66	94.66
HORVU1Hr1G005290.1	Barley	cytosol	91.1	91.1
Os05t0112101-01	Rice	plasma membrane	67.96	72.29
Zm00001d035652_P001	Maize	cytosol	62.3	64.49
EES18894	Sorghum	cytosol	64.89	64.37
TraesCS4D01G208100.1	Wheat	cytosol, mitochondrion, plastid	52.43	57.86
CDY35361	Canola	cytosol	52.43	54.82
CDX76976	Canola	cytosol	52.27	54.47
CDX68831	Canola	cytosol	51.78	54.15
CDY11530	Canola	cytosol	50.81	54.14
CDX75232	Canola	cytosol	51.78	53.96
PGSC0003DMT400079380	Potato	cytosol, mitochondrion, plastid	51.78	51.95
Bra011333.1-P	Field mustard	cytosol	52.59	51.83
GSMUA_Achr9P03950_001	Banana	cytosol, mitochondrion, plastid	44.17	51.8
KRH52429	Soybean	endoplasmic reticulum	53.72	51.79
VIT_11s0016g05480.t01	Wine grape	cytosol	52.75	51.5
Bra007800.1-P	Field mustard	cytosol	50.97	51.39
Solyc07g008060.1.1	Tomato	cytosol	50.97	51.3
PGSC0003DMT400035762	Potato	cytosol	52.91	51.17
KRH61760	Soybean	mitochondrion	53.72	50.92
GSMUA_Achr11P...	Banana	cytosol	37.54	50.88
AT4G32285.2	Thale cress	cytosol	52.27	50.87
PGSC0003DMT400040963	Potato	cytosol	52.59	50.7
Bra034252.1-P	Field mustard	cytosol	53.24	50.69
Solyc08g059660.1.1	Tomato	cytosol	52.1	50.63
VIT_04s0008g05540.t01	Wine grape	cytosol	53.88	50.23
CDX76977	Canola	cytosol	42.07	49.81
Solyc06g011450.1.1	Tomato	cytosol	49.35	49.67
AT2G25430.1	Thale cress	cytosol	52.43	49.62
CDX76760	Canola	cytosol	37.38	49.46
KRH20132	Soybean	cytosol	48.54	49.02
GSMUA_Achr6P33420_001	Banana	cytosol, mitochondrion, plastid	42.07	41.14
KRH05593	Soybean	cytosol	5.34	38.37
TraesCS1D01G266400.1	Wheat	mitochondrion	39.16	36.56
TraesCS7D01G414100.1	Wheat	mitochondrion	27.02	29.4
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	25.89	28.32
TraesCS3D01G259000.2	Wheat	cytosol	25.57	28.06
TraesCS7D01G476900.2	Wheat	cytosol	25.57	27.29
TraesCS7D01G140200.1	Wheat	cytosol	24.6	26.95
TraesCS6D01G143700.1	Wheat	cytosol	24.43	25.72
TraesCS6D01G354100.2	Wheat	cytosol	23.95	25.0
TraesCS5D01G304500.1	Wheat	mitochondrion	13.92	19.46
TraesCS4D01G085400.1	Wheat	mitochondrion	11.97	18.73

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF23
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:TraesCS1D01G036500	EnsemblPlants:TraesCS1D01G036500.1	TIGR:cd03564
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:17015539..17017469

Molecular Weight (calculated)

65675.5 Da

IEP (calculated)

6.142

GRAVY (calculated)

-0.188

Length

618 amino acids

Sequence
(BLAST)

001: MSIRKALGAV KDQATIGIAK VSSAVAPDLD VAIVRATAHD DGAPDERHVQ EVLRLTSGSS RVQVAACVAT VSRRLARTRD YVVTAKCLAL LHRLVADGDP
101: HFRHELVRPA VSAGRRGGGA APVLAALSDF RDEAHSASWD HSAFVRAYAL YLDDRVRFLL ALLPAPRTVR FADHDGFGYG GRAAGGASPP PDMTVSVHDM
201: DVEGLLARGQ QLRQLIDRFL ACRPTGAARR SRVVLATLWP VVKESARLYE DVAVVLAVLL DRFFDMEYPD CVKAFEAHVS TARLVDDLLA FYSWCDDAGV
301: ARSSDFPEVK RIDDKLLETL EQFVRERGRA GQNSPPPLQL QHAVQEASPS EDEHHQAEYD MNGIKALPAP EHANAATVAR SEPAKASARP VARVPDQTSD
401: LVDLRESAAG ADEQGNKLAL ALFSEPPQSA NGSWVAFPSD DGAPKAATTS AWQTPAAEPG KADWELALVE TASSLSRQTA ALGGGMDPLL LHGMYDQGAV
501: RQHARAQAAS GSASSVALPG APATHILALP GPDGAVGGDP FAASLAVPPP SYVQMAEMER KQELLAQEQR MWAQYRQGGM QGQAGLNGLA VGGGGSAFAS
601: NTSVPMPMAY HGAGGYYY

Best Arabidopsis Sequence Match ( AT4G32285.2 )
(BLAST)

001: MALSMRKAIG VVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDQSSDKY IREILSLTSL SRGYVHACVT SVSRRLKKTR DWIVALKALM LVHRLLNEGD
101: PLFQEEILYA TRRGTRILNM SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERRGRN GGGSSSSHQS NGDDGYNRSR DDFRSPPPRT YDYETGNGFG
201: MPKRSRSFGD VNEIGAREEK KSVTPLREMT PERIFGKMGH LQRLLDRFLS CRPTGLAKNS RMILIAMYPV VKESFRLYAD ICEVLAVLLD KFFDMEYTDC
301: VKAFDAYASA AKQIDELIAF YHWCKDTGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRA KSPERKEIEA PPAPAPPVEE PVDMNEIKAL PPPENHTPPP
401: PPAPEPKPQQ PQVTDDLVNL REDDVSGDDQ GNKFALALFA GPPANNGKWE AFSSDNNVTS AWQNPAAELG KADWELALVE TASNLEHQKA AMGGGLDPLL
501: LNGMYDQGAV RQHVSTSELT GGSSSSVALP LPGKVNSHIL ALPAPDGTVQ KVNQDPFAAS LTIPPPSYVQ MAEMDKKQYL LTQEQQLWQQ YQQEGMRGQA
601: SLAKMNTAQT AMPYGMPPVN GMGPSPMGYY YNNPY

Arabidopsis Description

Probable clathrin assembly protein At4g32285 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.