Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45281 | Canola | cytosol | 74.63 | 73.76 |
| CDY41097 | Canola | cytosol | 74.04 | 72.97 |
| Bra026195.1-P | Field mustard | cytosol | 74.63 | 71.07 |
| AT2G01920.1 | Thale cress | mitochondrion | 47.79 | 51.92 |
| AT1G25240.2 | Thale cress | mitochondrion | 44.25 | 39.79 |
| AT1G68110.1 | Thale cress | mitochondrion | 42.48 | 37.99 |
| VIT_01s0011g06370.t01 | Wine grape | mitochondrion | 39.82 | 35.06 |
| Solyc01g005070.2.1 | Tomato | mitochondrion | 40.71 | 34.67 |
| PGSC0003DMT400058608 | Potato | mitochondrion | 40.41 | 34.25 |
| PGSC0003DMT400075705 | Potato | mitochondrion | 38.05 | 32.91 |
| Solyc04g008350.1.1 | Tomato | mitochondrion | 38.05 | 32.82 |
| KRG89239 | Soybean | cytosol, mitochondrion | 35.4 | 31.25 |
| KRH49763 | Soybean | mitochondrion | 35.4 | 30.85 |
| KRH58584 | Soybean | mitochondrion | 35.69 | 30.33 |
| KRH42490 | Soybean | cytosol | 35.99 | 30.2 |
| EES13983 | Sorghum | mitochondrion | 34.81 | 29.35 |
| Zm00001d049990_P001 | Maize | mitochondrion | 33.04 | 28.87 |
| Os08t0467300-01 | Rice | mitochondrion | 33.04 | 28.28 |
| GSMUA_Achr7P18620_001 | Banana | mitochondrion | 31.86 | 27.84 |
| EER96828 | Sorghum | mitochondrion | 32.15 | 27.11 |
| TraesCS5B01G296700.1 | Wheat | mitochondrion | 30.09 | 26.7 |
| TraesCS5A01G297400.1 | Wheat | mitochondrion | 29.2 | 26.26 |
| Zm00001d005869_P001 | Maize | mitochondrion | 30.68 | 26.13 |
| GSMUA_Achr7P02390_001 | Banana | cytosol | 31.56 | 25.72 |
| GSMUA_Achr8P22890_001 | Banana | mitochondrion | 29.5 | 25.19 |
| HORVU7Hr1G089710.1 | Barley | mitochondrion | 12.68 | 24.29 |
| GSMUA_Achr3P20230_001 | Banana | mitochondrion | 23.01 | 23.57 |
| Zm00001d031760_P001 | Maize | mitochondrion | 33.92 | 23.37 |
| HORVU5Hr1G078270.1 | Barley | cytosol | 29.79 | 22.9 |
| TraesCS5D01G304500.1 | Wheat | mitochondrion | 29.79 | 22.85 |
| AT1G33340.1 | Thale cress | cytosol, mitochondrion, nucleus | 16.81 | 15.24 |
| AT4G32285.2 | Thale cress | cytosol | 25.96 | 13.86 |
| AT2G25430.1 | Thale cress | cytosol | 25.07 | 13.02 |
| AT2G01600.1 | Thale cress | cytosol, mitochondrion | 21.83 | 12.96 |
| AT5G35200.2 | Thale cress | cytosol | 20.65 | 12.87 |
| AT1G03050.1 | Thale cress | cytosol, mitochondrion | 22.71 | 12.85 |
| AT4G02650.1 | Thale cress | mitochondrion | 23.01 | 12.77 |
| AT1G05020.1 | Thale cress | cytosol | 23.89 | 12.4 |
| AT5G57200.1 | Thale cress | cytosol | 20.06 | 11.51 |
| AT4G25940.1 | Thale cress | cytosol | 19.47 | 10.98 |
| AT1G14910.1 | Thale cress | mitochondrion | 22.12 | 10.84 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:35.1 | EntrezGene:838032 | UniProt:A0A178WFG9 | ProteinID:AAF79250.1 |
| ProteinID:AEE29205.1 | InterPro:ANTH_dom | ArrayExpress:AT1G14686 | EnsemblPlantsGene:AT1G14686 | RefSeq:AT1G14686 | TAIR:AT1G14686 |
| RefSeq:AT1G14686-TAIR-G | EnsemblPlants:AT1G14686.1 | TAIR:AT1G14686.1 | InterPro:Clathrin_AP_dom2 | ncoils:Coil | InterPro:ENTH |
| InterPro:ENTH_VHS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005905 |
| GO:GO:0006810 | GO:GO:0006897 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0030136 | GO:GO:0030276 | GO:GO:0031410 | GO:GO:0048268 | InterPro:IPR008942 |
| InterPro:IPR013809 | InterPro:IPR014712 | RefSeq:NP_683306.1 | ProteinID:OAP16874.1 | PFAM:PF07651 | PFscan:PS50942 |
| PANTHER:PTHR22951 | PANTHER:PTHR22951:SF19 | UniProt:Q9LQW4 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | UniParc:UPI00000A7D7F |
| SEG:seg | : | : | : | : | : |
Description
Putative clathrin assembly protein At1g14686 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQW4]
Coordinates
chr1:-:5045641..5046893
Molecular Weight (calculated)
38090.2 Da
IEP (calculated)
5.203
GRAVY (calculated)
-0.031
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLWKRAAVV LKDGPSLIAA DDILTAAVVK ATSHDELSID TESAQFIYRH VLSSPSSLKP LVSLISSRVK RTRSWAVALK GLMLMHGFFL CKSTVAESIG
101: RLPFDLSSFG EGNSRIMSKS GGFNLFVRAY FAFLDRRSIL FHDGNRHRYN EESSVLIRLV IIRKMQIIVD SLIRIKPIGE NMMIPVINEA MENVVSEIME
201: IYGWICRRIA EVLPNVHSKI GKTEADLALK IVAKSMKQGG ELKKYFEFCK DLGVSNAQEI PNFVRIPEAD VIHLDELVRT AMESSEESAE RTEIAEEEEE
301: EEEEIETKLS DLITLDHNEE APASPPRVVV VDIPDLISF
101: RLPFDLSSFG EGNSRIMSKS GGFNLFVRAY FAFLDRRSIL FHDGNRHRYN EESSVLIRLV IIRKMQIIVD SLIRIKPIGE NMMIPVINEA MENVVSEIME
201: IYGWICRRIA EVLPNVHSKI GKTEADLALK IVAKSMKQGG ELKKYFEFCK DLGVSNAQEI PNFVRIPEAD VIHLDELVRT AMESSEESAE RTEIAEEEEE
301: EEEEIETKLS DLITLDHNEE APASPPRVVV VDIPDLISF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.