CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02791	Soybean	cytosol	93.55	93.55
KRH12315	Soybean	cytosol	76.31	73.49
KRH37330	Soybean	cytosol	74.74	71.98
CDY42239	Canola	cytosol	42.16	71.81
Os06t0661400-01	Rice	cytosol	30.14	69.2
VIT_11s0103g00620.t01	Wine grape	cytosol	66.55	64.64
CDY52732	Canola	cytosol	64.11	62.91
CDY38276	Canola	cytosol	64.81	62.84
Bra002750.1-P	Field mustard	cytosol	64.46	62.39
GSMUA_Achr7P04960_001	Banana	cytosol	59.76	62.36
AT5G57200.1	Thale cress	cytosol	63.76	61.93
Bra020460.1-P	Field mustard	cytosol	63.94	61.78
GSMUA_Achr1P15690_001	Banana	cytosol	59.76	61.36
CDX94400	Canola	cytosol	63.59	61.24
AT4G25940.1	Thale cress	cytosol	64.11	61.23
Bra013934.1-P	Field mustard	cytosol	64.11	61.23
Solyc02g043810.2.1	Tomato	cytosol	61.5	61.07
CDX89382	Canola	cytosol	63.94	61.06
CDY47927	Canola	cytosol	53.66	60.99
GSMUA_Achr4P20660_001	Banana	cytosol	59.06	60.86
PGSC0003DMT400036570	Potato	cytosol	60.45	60.56
Zm00001d036672_P005	Maize	cytosol	58.01	57.91
EES06356	Sorghum	cytosol	57.49	57.89
GSMUA_Achr3P05590_001	Banana	cytosol	55.05	57.88
KXG20534	Sorghum	cytosol, mitochondrion	58.19	57.59
Zm00001d015430_P001	Maize	cytosol	57.84	57.54
Os02t0175700-01	Rice	plasma membrane	57.84	56.95
KRH58627	Soybean	nucleus	55.92	56.41
KRH42533	Soybean	cytosol	55.75	56.34
KXG20765	Sorghum	mitochondrion	55.75	56.34
TraesCS6B01G181800.1	Wheat	cytosol	55.4	55.11
HORVU7Hr1G109970.5	Barley	cytosol	54.88	55.07
KRH38239	Soybean	cytosol	52.79	54.69
TraesCS7D01G476900.2	Wheat	cytosol	54.88	54.4
TraesCS7A01G490500.2	Wheat	cytosol	54.36	54.36
TraesCS6D01G143700.1	Wheat	cytosol	55.57	54.34
TraesCS7B01G393800.2	Wheat	cytosol	53.83	54.21
TraesCS6A01G154100.1	Wheat	cytosol	54.88	53.75
Os06t0699800-00	Rice	cytosol	40.94	53.53
TraesCS7B01G322300.1	Wheat	mitochondrion	52.44	53.27
TraesCS7D01G414100.1	Wheat	mitochondrion	52.26	52.82
TraesCS7A01G421900.1	Wheat	mitochondrion	52.44	52.81
HORVU7Hr1G097510.7	Barley	mitochondrion	45.82	51.47
HORVU6Hr1G030980.1	Barley	cytosol	55.23	51.21
TraesCS7B01G430700.2	Wheat	cytosol	12.72	51.05
KRH20163	Soybean	cytosol	48.08	50.55
KRH03643	Soybean	mitochondrion	48.26	50.55
KRH05593	Soybean	cytosol	5.4	36.05
KRH54979	Soybean	cytosol	31.01	35.18
KRH43936	Soybean	cytosol, mitochondrion	29.97	29.01
KRH58332	Soybean	mitochondrion	29.27	28.72
KRH10492	Soybean	cytosol, mitochondrion	29.62	28.52
KRH52429	Soybean	endoplasmic reticulum	30.84	27.61
KRH41749	Soybean	cytosol	13.41	27.21
KRH61760	Soybean	mitochondrion	30.66	26.99
KRH20132	Soybean	cytosol	28.57	26.8
KRH09259	Soybean	cytosol, nucleus, peroxisome	18.12	24.19
KRH38757	Soybean	cytosol, nucleus, peroxisome	17.94	23.73
KRH60451	Soybean	mitochondrion	17.94	23.25
KRH42490	Soybean	cytosol	16.2	23.02
KRH58584	Soybean	mitochondrion	15.85	22.81
KRG89239	Soybean	cytosol, mitochondrion	14.46	21.61
KRH49763	Soybean	mitochondrion	14.11	20.82
KRH17907	Soybean	cytosol	21.6	16.99

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100815975	MapMan:22.1.6.2	EMBL:ACUP02008169	InterPro:ANTH_dom
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	EnsemblPlantsGene:GLYMA_13G100400	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	UniProt:I1LVM2	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
EnsemblPlants:KRH19094	ProteinID:KRH19094	ProteinID:KRH19094.1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF56	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI00029597DE	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:21569452..21574899

Molecular Weight (calculated)

65693.7 Da

IEP (calculated)

5.390

GRAVY (calculated)

-0.572

Length

574 amino acids

Sequence
(BLAST)

001: MGTFQTLRKA YGALKDSTTV GLAKVNSEYK ELDIAIVKAT SHVEYPPKER HVRKIFYATS AHQPRADVAY CIHTLAKRLS KTRNWIVAIK TLIVIHRILR
101: EGDPTFKDDL INYARRGRFL QISNFKDDSS ALAWDCSAWI RTYALFLEEK LEYFRILRCD IEAERLTKPS PTKTQGHSRT RMLTSEELLE QLPALQQLLY
201: RLIGCEPEGL AFSNYLIQYA LALILKESFK IYCALNDGII NLVDVFFDMP KYDAVKALHI YKRAGQQAEN LADFYEYCKR LDLARNFQFP TLRQPPASFL
301: ATMEEYIREA PLTATKRLEY HENDQSPQRE EAKHREAEAS EQPDEEVNEE EPVDKDETQP KEEEAELPPL ISTDDTDDLL GLNEINPKAQ ELEENNALAL
401: AIVPPGGHNS SNLALTNISG TSGWELALVT TPSSHTSQAP DRKMAGGFDK LLLDSLYEDE NARRQLQLRN AGYGYEGMVT HNPFDHYNQQ DPFAMSNIAP
501: PANVQMAFMA QQQQQMMFQQ QQQYNTMMVP YQYPQTQYNQ QMPVIGSSNP FNDALPMPSY PHSSMHHQGN YHLM

Best Arabidopsis Sequence Match ( AT4G25940.1 )
(BLAST)

001: MATFNSFRKA VGAIKDSTTV SIAKVNSEFK DLDVAIVKAT NHVESAPKER HIRRIFSATS VVQPRADVAY CIHALAKRLS KTRNWVVAIK VLIVIHRTLR
101: EGDPTFREEL LNYSHRGHIL RISNFKDDTS PLAWDCSAWI RTYALFLEER LECYRVLKYD IEAERLPKGS GASSKNVDFN ASQTYRTRML SDEELLEQLP
201: ALQQLLYRLI GCQPEGSAYS NYLIQYALAL VLKESFKIYC AINDGIINLV DMFFEMSRHD AVKALNIYKR AGQQAENLAD FYEYCKGLEL ARNFQFPTLR
301: QPPPSFLATM EDYIKEAPQS GSVQKKLEYQ EKEEEEQEEE EAEHSVQPEE PAEADNQKEN SEGDQPLIEE EEEDQEKIEE EDAKPSFLID TDDLLGLNEI
401: NPKAAEIEDR NALALAIYPP GHEAPGPSNI LSLIETGGSG WELALVTPQN NNNNNNPRPA PNTKLAGGFD NLLLDSLYED DSARRQIQLT NAGYGHGGID
501: TTAAPPNPFQ MQQDPFAMSN NIAPPTNVQM AMQQQQQQQM TMMHQSPYNY THPHDYHQNH HHHQFSAGPS PSNPFGDAFL ALPPPPGSAG PQQNNHHHML
601: L

Arabidopsis Description

Putative clathrin assembly protein At4g25940 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.