Factsheet for VIT_09s0070g00940.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0273g00040.t01	Wine grape	nucleus	75.47	86.02
VIT_15s0045g00200.t01	Wine grape	nucleus	71.7	82.61
VIT_00s0239g00150.t01	Wine grape	cytosol	75.47	79.21
VIT_19s0140g00050.t01	Wine grape	nucleus	66.98	78.02
VIT_00s0239g00070.t01	Wine grape	cytosol	79.25	73.68
VIT_00s0198g00120.t01	Wine grape	nucleus	67.92	71.29
VIT_00s0239g00010.t01	Wine grape	cytosol	71.7	67.26
VIT_09s0070g00870.t01	Wine grape	extracellular	66.04	61.4
VIT_00s0198g00090.t01	Wine grape	cytosol	76.42	59.12
VIT_13s0067g02230.t01	Wine grape	mitochondrion	47.17	54.95
VIT_13s0067g02270.t01	Wine grape	cytosol	49.06	54.74
VIT_00s0173g00220.t01	Wine grape	nucleus	80.19	53.46
VIT_13s0067g02180.t01	Wine grape	mitochondrion, nucleus	71.7	52.78
VIT_13s0067g02320.t01	Wine grape	cytosol	56.6	50.0
Solyc01g057460.2.1	Tomato	cytosol	42.45	48.39
VIT_13s0067g02040.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome, plastid	64.15	44.44
VIT_00s0169g00040.t01	Wine grape	cytosol	75.47	31.37
VIT_13s0067g02200.t01	Wine grape	mitochondrion	51.89	28.95
PGSC0003DMT400019244	Potato	cytosol	39.62	28.0
PGSC0003DMT400022608	Potato	cytosol	33.96	20.0
Bra028029.1-P	Field mustard	cytosol	37.74	18.6
Bra026104.1-P	Field mustard	mitochondrion	34.91	18.59
AT1G15790.3	Thale cress	cytosol	33.02	18.52
Bra026102.1-P	Field mustard	cytosol	26.42	17.61
PGSC0003DMT400027566	Potato	mitochondrion, nucleus	28.3	12.4
VIT_07s0031g02580.t01	Wine grape	nucleus	36.79	10.34
Bra026103.1-P	Field mustard	cytosol	29.25	9.09
Solyc04g009500.2.1	Tomato	nucleus	47.17	8.68
VIT_08s0040g00740.t01	Wine grape	nucleus	22.64	5.9
KRH47405	Soybean	nucleus	51.89	5.18
KRH44505	Soybean	nucleus	54.72	4.45
KRH23611	Soybean	nucleus	53.77	4.31
KRH09691	Soybean	nucleus	53.77	4.23
Bra026106.1-P	Field mustard	nucleus	46.23	4.02
Bra026749.1-P	Field mustard	nucleus	42.45	3.59
Bra016651.1-P	Field mustard	endoplasmic reticulum, vacuole	45.28	3.58
AT1G15780.2	Thale cress	nucleus	45.28	3.51
Bra026108.1-P	Field mustard	nucleus	22.64	2.14
VIT_05s0102g01050.t01	Wine grape	plastid	4.72	1.63
VIT_07s0031g02570.t01	Wine grape	cytosol	4.72	0.64
GSMUA_Achr11P...	Banana	nucleus	2.83	0.4
VIT_13s0047g01240.t01	Wine grape	nucleus	2.83	0.25
VIT_08s0040g00730.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_09s0070g00940	EMBL:FN596740	EnsemblPlants:VIT_09s0070g00940.t01	EnsemblPlantsGene:VIT_09s0070g00940	Gene3D:1.10.246.20	InterPro:MED15_KIX
PANTHER:PTHR33137	PANTHER:PTHR33137:SF4	PFAM:PF16987	ProteinID:CCB61477	ProteinID:CCB61477.1	UniParc:UPI000210A85A
UniProt:F6I3F9	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr9:+:14754973..14772109

Molecular Weight (calculated)

12152.5 Da

IEP (calculated)

10.627

GRAVY (calculated)

-0.871

Length

106 amino acids

Sequence
(BLAST)

001: MDTLKRHLPI SGPEGLHELR KIVERFEEKI YYAATSQHGH IEETSSYFWT RGTSDYLRKI SLKMLTMETK SFNVATNSLP SNSAGHSKKS PNDKKSLARK
101: KALRSR

Best Arabidopsis Sequence Match ( AT1G15780.3 )
(BLAST)

0001: MNFVDVIKFA YFEFLDSRSE NLMDNNNWRP SLPNGEPAMD TGDWRTQLPP DSRQKIVNKI METLKKHLPF SGPEGINELR RIAARFEEKI FSGALNQTDY
0101: LRKISMKMLT METKSQNAAG SSAAIPAANN GTSIDSIPTN QGQLLPGSLS TNQSQAPQPL LSQTMQNNTA SGMTGSTALP SSMPPVSSIT NNNTTSVVNQ
0201: NANMQNVAGM LQDSSGQHGL SSNMFSGPQR QMLGRPHAMS SQQQQQPYLY QQQLQQQLLK QNFQSGNVPN PNSLLPSHIQ QQQQNVLQPN QLHSSQQPGV
0301: PTSATQPSTV NSAPLQGLHT NQQSSPQLSS QQTTQSMLRQ HQSSMLRQHP QSQQASGIHQ QQSSLPQQSI SPLQQQPTQL MRQQAANSSG IQQKQMMGQH
0401: VVGDMQQQHQ QRLLNQQNNV MNIQQQQSQQ QPLQQPQQQQ KQQPPAQQQL MSQQNSLQAT HQNPLGTQSN VAGLQQPQQQ MLNSQVGNSS LQNNQHSVHM
0501: LSQPTVGLQR THQAGHGLYS SQGQQSQNQP SQQQMMPQLQ SHHQQLGLQQ QPNLLQQDVQ QRLQASGQVT GSLLPPQNVV DQQRQLYQSQ RTLPEMPSSS
0601: LDSTAQTESA NGGDWQEEVY QKIKSMKETY LPDLNEIYQR VAAKLQQDSM PQQQRSDQLE KLRQFKTMLE RMIQFLSVSK SNIMPALKDK VAYYEKQIIG
0701: FLNMHRPRKP VQQGQLPQSQ MQPMQQPQSQ TVQDQSHDNQ TNPQMQSMSM QGAGPRAQQS SMTNMQSNVL SSRPGVSAPQ QNIPSSIPAS SLESGQGNTL
0801: NNGQQVAMGS MQQNTSQLVN NSSASAQSGL STLQSNVNQP QLSSSLLQHQ HLKQQQDQQM QLKQQFQQRQ MQQQQLQARQ QQQQQQLQAR QQAAQLQQMN
0901: DMNDLTSRQG MNVSRGMFQQ HSMQGQRANY PLQQLKPGAV SSPQLLQGAS PQMSQHLSPQ VDQKNTVNKM GTPLQPANSP FVVPSPSSTP LAPSPMQVDS
1001: EKPGSSSLSM GNIARQQATG MQGVVQSLAI GTPGISASPL LQEFTSPDGN ILNSSTITSG KPSATELPIE RLIRAVKSIS PQALSSAVSD IGSVVSMVDR
1101: IAGSAPGNGS RASVGEDLVA MTKCRLQARN FMTQEGMMAT KKMKRHTTAM PLSVASLGGS VGDNYKQFAG SETSDLESTA TSDGKKARTE TEHALLEEIK
1201: EINQRLIDTV VEISDDEDAA DPSEVAISSI GCEGTTVRFS FIAVSLSPAL KAHLSSTQMS PIQPLRLLVP CSYPNGSPSL LDKLPVETSK ENEDLSSKAM
1301: ARFNILLRSL SQPMSLKDIA KTWDACARAV ICEYAQQFGG GTFSSKYGTW EKYVAAS

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.