Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36595 | Canola | cytosol | 100.0 | 100.0 |
| Bra026102.1-P | Field mustard | cytosol | 24.05 | 51.57 |
| Solyc01g057460.2.1 | Tomato | cytosol | 13.2 | 48.39 |
| VIT_13s0067g02320.t01 | Wine grape | cytosol | 16.42 | 46.67 |
| Bra026748.1-P | Field mustard | cytosol | 19.06 | 46.1 |
| VIT_13s0067g02270.t01 | Wine grape | cytosol | 12.61 | 45.26 |
| PGSC0003DMT400090172 | Potato | cytosol | 14.96 | 37.5 |
| GSMUA_Achr8P09810_001 | Banana | nucleus | 12.32 | 35.59 |
| VIT_13s0067g02180.t01 | Wine grape | mitochondrion, nucleus | 14.08 | 33.33 |
| AT1G15790.3 | Thale cress | cytosol | 17.6 | 31.75 |
| PGSC0003DMT400019244 | Potato | cytosol | 13.78 | 31.33 |
| VIT_00s0239g00010.t01 | Wine grape | cytosol | 10.26 | 30.97 |
| VIT_00s0239g00150.t01 | Wine grape | cytosol | 9.09 | 30.69 |
| VIT_00s0273g00040.t01 | Wine grape | nucleus | 8.21 | 30.11 |
| VIT_09s0070g00940.t01 | Wine grape | nucleus | 9.09 | 29.25 |
| Bra028029.1-P | Field mustard | cytosol | 18.18 | 28.84 |
| VIT_13s0067g02040.t01 | Wine grape | cytosol, mitochondrion, nucleus, peroxisome, plastid | 12.9 | 28.76 |
| VIT_19s0140g00050.t01 | Wine grape | nucleus | 7.62 | 28.57 |
| VIT_00s0239g00070.t01 | Wine grape | cytosol | 9.09 | 27.19 |
| VIT_15s0045g00200.t01 | Wine grape | nucleus | 7.33 | 27.17 |
| Bra026104.1-P | Field mustard | mitochondrion | 15.84 | 27.14 |
| PGSC0003DMT400022608 | Potato | cytosol | 13.2 | 25.0 |
| VIT_00s0198g00120.t01 | Wine grape | nucleus | 7.04 | 23.76 |
| VIT_09s0070g00870.t01 | Wine grape | extracellular | 7.92 | 23.68 |
| VIT_00s0198g00090.t01 | Wine grape | cytosol | 8.5 | 21.17 |
| VIT_13s0067g02200.t01 | Wine grape | mitochondrion | 11.73 | 21.05 |
| VIT_00s0173g00220.t01 | Wine grape | nucleus | 8.5 | 18.24 |
| PGSC0003DMT400027566 | Potato | mitochondrion, nucleus | 9.68 | 13.64 |
| VIT_00s0169g00040.t01 | Wine grape | cytosol | 9.38 | 12.55 |
| Solyc04g009500.2.1 | Tomato | nucleus | 19.35 | 11.46 |
| Bra026105.1-P | Field mustard | cytosol | 31.09 | 10.07 |
| VIT_07s0031g02580.t01 | Wine grape | nucleus | 9.97 | 9.02 |
| Bra026106.1-P | Field mustard | nucleus | 27.86 | 7.79 |
| Bra026749.1-P | Field mustard | nucleus | 24.93 | 6.78 |
| Bra016651.1-P | Field mustard | endoplasmic reticulum, vacuole | 26.1 | 6.63 |
| KRH47405 | Soybean | nucleus | 19.94 | 6.4 |
| Bra036204.1-P | Field mustard | nucleus | 10.56 | 5.83 |
| KRH44505 | Soybean | nucleus | 21.7 | 5.67 |
| KRH45069 | Soybean | nucleus | 2.64 | 5.39 |
| KRH23611 | Soybean | nucleus | 20.53 | 5.29 |
| KRH09691 | Soybean | nucleus | 20.82 | 5.27 |
| Bra026108.1-P | Field mustard | nucleus | 17.01 | 5.16 |
| KRH08039 | Soybean | cytosol | 1.17 | 4.76 |
| Bra040585.1-P | Field mustard | nucleus | 11.73 | 4.45 |
| Bra025408.1-P | Field mustard | nucleus | 11.44 | 3.7 |
| VIT_07s0031g02570.t01 | Wine grape | cytosol | 4.69 | 2.05 |
| VIT_13s0047g01240.t01 | Wine grape | nucleus | 7.04 | 2.02 |
| VIT_05s0102g01050.t01 | Wine grape | plastid | 0.59 | 0.65 |
Protein Annotations
| EnsemblPlants:Bra026103.1 | EnsemblPlants:Bra026103.1-P | EnsemblPlantsGene:Bra026103 | Gene3D:1.10.246.20 | InterPro:MED15_KIX | PANTHER:PTHR33137 |
| PANTHER:PTHR33137:SF4 | PFAM:PF16987 | SEG:seg | UniParc:UPI000253F121 | UniProt:M4EBE4 | MapMan:35.1 |
Description
AT1G15790 (E=1e-041) | unknown protein
Coordinates
chrA06:-:6131206..6133682
Molecular Weight (calculated)
38473.8 Da
IEP (calculated)
9.730
GRAVY (calculated)
-0.678
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTDDWRAHL TPDSRQKIAN NITEKLMKHL PFYGAKGMNE AGTIAATFED EIFRGAVDQT DYLRKISMKM VTMETKWQDA AGSSSSSSFS VPEASKKLPL
101: KTDNVNSKPL LTRAEAAVNT CDLTTQLPSD PRQNNANTTY TSVQYMTGPS LPSREPAMTT YDWRTQLKPD SRERVVNKIT ETLQKHIPYS SPEEVRRIAV
201: KFEEKIFRSA VNHTGYLRSI SMKMLTMETR YQTAARSSTI LPIAGAYKSL HFNPGCHQMT IEGPVNTGDW RTCLPPDSRK KNANKIKGTL KEHVPNCGKE
301: GNKELKRIAV SFEELIFNTA IDQVDYFRKI SFKIQSTKES D
101: KTDNVNSKPL LTRAEAAVNT CDLTTQLPSD PRQNNANTTY TSVQYMTGPS LPSREPAMTT YDWRTQLKPD SRERVVNKIT ETLQKHIPYS SPEEVRRIAV
201: KFEEKIFRSA VNHTGYLRSI SMKMLTMETR YQTAARSSTI LPIAGAYKSL HFNPGCHQMT IEGPVNTGDW RTCLPPDSRK KNANKIKGTL KEHVPNCGKE
301: GNKELKRIAV SFEELIFNTA IDQVDYFRKI SFKIQSTKES D
001: MDTTGDWRTQ FPSASRSRIV NKIMETQLKQ LPFIRPEGTN ELRKIAVRFE EKLFNNASNQ TEYLRQICMK MLNMETKSQN AAGSSSADDN TPPLVPEPSV
101: PNNEPAVNTG DWRTQQPQDS RQKNINALLD TLKKIVPHSG KEGIDELMRI AVSLEELIFN SAINQEDYLG KISLKMRTM
101: PNNEPAVNTG DWRTQQPQDS RQKNINALLD TLKKIVPHSG KEGIDELMRI AVSLEELIFN SAINQEDYLG KISLKMRTM
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (sour /.../BI BLink). [Source:TAIR;Acc:AT1G15790]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.