Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83970 | Canola | mitochondrion | 80.4 | 90.37 |
| Bra026108.1-P | Field mustard | nucleus | 69.97 | 83.54 |
| Bra026749.1-P | Field mustard | nucleus | 75.11 | 80.45 |
| AT1G15780.2 | Thale cress | nucleus | 78.54 | 77.16 |
| VIT_13s0067g02270.t01 | Wine grape | cytosol | 4.4 | 62.11 |
| VIT_13s0067g02320.t01 | Wine grape | cytosol | 5.51 | 61.67 |
| Solyc01g057460.2.1 | Tomato | cytosol | 4.25 | 61.29 |
| Solyc04g009500.2.1 | Tomato | nucleus | 24.74 | 57.64 |
| KRH23611 | Soybean | nucleus | 51.27 | 51.96 |
| VIT_13s0047g01240.t01 | Wine grape | nucleus | 45.45 | 51.39 |
| KRH44505 | Soybean | nucleus | 49.25 | 50.69 |
| KRH09691 | Soybean | nucleus | 50.75 | 50.59 |
| VIT_00s0273g00040.t01 | Wine grape | nucleus | 3.5 | 50.54 |
| VIT_05s0102g01050.t01 | Wine grape | plastid | 11.25 | 49.19 |
| KRH08039 | Soybean | cytosol | 3.06 | 48.81 |
| VIT_19s0140g00050.t01 | Wine grape | nucleus | 3.28 | 48.35 |
| GSMUA_Achr8P09810_001 | Banana | nucleus | 4.25 | 48.31 |
| KRH47405 | Soybean | nucleus | 37.78 | 47.74 |
| Bra026748.1-P | Field mustard | cytosol | 4.99 | 47.52 |
| VIT_15s0045g00200.t01 | Wine grape | nucleus | 3.13 | 45.65 |
| VIT_00s0239g00150.t01 | Wine grape | cytosol | 3.43 | 45.54 |
| VIT_09s0070g00940.t01 | Wine grape | nucleus | 3.58 | 45.28 |
| VIT_13s0067g02180.t01 | Wine grape | mitochondrion, nucleus | 4.77 | 44.44 |
| PGSC0003DMT400090172 | Potato | cytosol | 4.47 | 44.12 |
| VIT_00s0198g00120.t01 | Wine grape | nucleus | 3.28 | 43.56 |
| Bra026102.1-P | Field mustard | cytosol | 5.14 | 43.4 |
| VIT_00s0239g00070.t01 | Wine grape | cytosol | 3.65 | 42.98 |
| VIT_00s0239g00010.t01 | Wine grape | cytosol | 3.58 | 42.48 |
| PGSC0003DMT400022608 | Potato | cytosol | 5.59 | 41.67 |
| VIT_09s0070g00870.t01 | Wine grape | extracellular | 3.5 | 41.23 |
| VIT_00s0198g00090.t01 | Wine grape | cytosol | 4.17 | 40.88 |
| PGSC0003DMT400019244 | Potato | cytosol | 4.55 | 40.67 |
| VIT_13s0067g02040.t01 | Wine grape | cytosol, mitochondrion, nucleus, peroxisome, plastid | 4.62 | 40.52 |
| Bra028029.1-P | Field mustard | cytosol | 6.41 | 40.0 |
| Bra026106.1-P | Field mustard | nucleus | 35.47 | 39.02 |
| Bra026104.1-P | Field mustard | mitochondrion | 5.37 | 36.18 |
| VIT_00s0173g00220.t01 | Wine grape | nucleus | 4.17 | 35.22 |
| PGSC0003DMT400027566 | Potato | mitochondrion, nucleus | 6.33 | 35.12 |
| Bra036204.1-P | Field mustard | nucleus | 16.17 | 35.11 |
| KRH45069 | Soybean | nucleus | 4.25 | 34.13 |
| Bra040585.1-P | Field mustard | nucleus | 20.86 | 31.15 |
| Bra025408.1-P | Field mustard | nucleus | 23.62 | 30.08 |
| VIT_07s0031g02580.t01 | Wine grape | nucleus | 8.2 | 29.18 |
| VIT_07s0031g02570.t01 | Wine grape | cytosol | 16.84 | 28.97 |
| Bra026103.1-P | Field mustard | cytosol | 6.63 | 26.1 |
| VIT_13s0067g02200.t01 | Wine grape | mitochondrion | 3.5 | 24.74 |
| VIT_00s0169g00040.t01 | Wine grape | cytosol | 4.02 | 21.18 |
| Bra026105.1-P | Field mustard | cytosol | 9.69 | 12.35 |
Protein Annotations
| EnsemblPlants:Bra016651.1 | EnsemblPlants:Bra016651.1-P | EnsemblPlantsGene:Bra016651 | Gene3D:1.10.246.20 | InterPro:MED15_KIX | ncoils:Coil |
| PFAM:PF16987 | SEG:seg | UniParc:UPI000254589F | UniProt:M4DJH3 | MapMan:15.3.3.3.5 | : |
Description
AT1G15780 (E=3e-223) | unknown protein
Coordinates
chrA08:+:19425930..19431806
Molecular Weight (calculated)
147279.0 Da
IEP (calculated)
8.906
GRAVY (calculated)
-0.704
Length
1342 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNFIGVIEYP YLLFLDSRFV ICYLSFESVA FCYEQETIEL DTWMDNNNWR PSLPSGDPAM ETGDWRAQLP PDSRQKIVNK IMETLKKHLP YSGPEGINEL
0101: RRIAARFEEK IFSGAVNQTD YLRKISMKML TMETKSQNQA GSSSTIPTAN NGTSMDSLPT NQGNLLPGTL PNNQSQAPQP LLPQTMQNNN LLPGTLPNNQ
0201: PQAPQPLLPQ TMQNNPASGM MGSSALPSSM PPVSSMTHNN VASVVNQNSN MQNVAGMLQD SSGQHGLSSN MFPGSQRQML GRPHTMSSQQ QQQQQQPQSA
0301: QYLYQQQLQQ QLLKQNFQSG NVPNPSSLLP SHIQQQQQQQ NVMQPNQMHS SQQSGIPTSA TQASSVSSAP LQGLHTNQQS SPQLPGQQTT TQAMLRQHQS
0401: SLLRQHPQSQ QASGIHQQQT SLPQQSISPL QQQQSQMIRQ QAANSSGIQQ KQMMGQHLVG DMQQQQHQQR LLNQQNNMMN MQQQQQPLQH KQQPPAQQLM
0501: SQQNSLQATQ QQPLGTQSNV TGLQQSNVTG LQQPQQQLLN SQVGNSNLQT NQQSVHMLSQ PTGMQRTHQA GHGLFPSQGQ QSQNQPSQQQ MMPLQSHHQL
0601: GLQQQPNVLQ QDVQQRLQSS GQVTGSLLPP QNVVDHQRQL YQSQRALPEM PSSSLDSTAQ TENANGVDWQ EEAFQKIKTM KEAYLPDLNE IYQRVTAKLQ
0701: QDSLPQQQRS EQFEKLKQFK TMLERMIQFL SVSKTNIVPA LKDKVTFYEK QIITFLNMHR PRKPVQQGQL PQSQMQPMQQ QQSQNVQDQS HDSQTNPQMQ
0801: SMSMPGSSGQ RAQQSSLTNM QNSLLSSRPG VSAPQQNIPS SMPASSLESG QGNALNNGQQ IAMGSMQQNT SQQQQVNNSS ASAQTRQGMN AGRGMFQQHS
0901: LQGQRANYPL QQLKPGSQLP VTSPQLMQGQ SPQMIQQHLS PQIDQKIAMS SVNKTGTPLQ PANSPFIVPS PSTPLAPSPM QVDSEKPSGA SSLSMGNTAR
1001: QQATGMQGVV QSLAIGTPGI SASPLLQEFI TADGNNLNPL ISISGKPSGA ELPMERLIRV VKSISPQALS SAVSDIGSVV SMVDRIAGSA PGNGSRASVG
1101: EDLVAMTKCR LQARNFMTQE GMMATKKMKR HTTAMPLSVS SLEGSVGDNY KQFACSGTSD LESTATSDGK KARTETDHAL LEEIKEINQR LLDTVVEISD
1201: DEDAADPSEG VTARKGCEGT TVKFSFIAVS LSPALKAHLS STQMSPIQPL RLLVPCSYPN GSPSLLDKLP VETSKDNEDL SSKAMARFNI LLRSLSQPMS
1301: LKDIAKTWDA CARTVICEYA QQFGGGTFSS KYGTWEKYVA AS
0101: RRIAARFEEK IFSGAVNQTD YLRKISMKML TMETKSQNQA GSSSTIPTAN NGTSMDSLPT NQGNLLPGTL PNNQSQAPQP LLPQTMQNNN LLPGTLPNNQ
0201: PQAPQPLLPQ TMQNNPASGM MGSSALPSSM PPVSSMTHNN VASVVNQNSN MQNVAGMLQD SSGQHGLSSN MFPGSQRQML GRPHTMSSQQ QQQQQQPQSA
0301: QYLYQQQLQQ QLLKQNFQSG NVPNPSSLLP SHIQQQQQQQ NVMQPNQMHS SQQSGIPTSA TQASSVSSAP LQGLHTNQQS SPQLPGQQTT TQAMLRQHQS
0401: SLLRQHPQSQ QASGIHQQQT SLPQQSISPL QQQQSQMIRQ QAANSSGIQQ KQMMGQHLVG DMQQQQHQQR LLNQQNNMMN MQQQQQPLQH KQQPPAQQLM
0501: SQQNSLQATQ QQPLGTQSNV TGLQQSNVTG LQQPQQQLLN SQVGNSNLQT NQQSVHMLSQ PTGMQRTHQA GHGLFPSQGQ QSQNQPSQQQ MMPLQSHHQL
0601: GLQQQPNVLQ QDVQQRLQSS GQVTGSLLPP QNVVDHQRQL YQSQRALPEM PSSSLDSTAQ TENANGVDWQ EEAFQKIKTM KEAYLPDLNE IYQRVTAKLQ
0701: QDSLPQQQRS EQFEKLKQFK TMLERMIQFL SVSKTNIVPA LKDKVTFYEK QIITFLNMHR PRKPVQQGQL PQSQMQPMQQ QQSQNVQDQS HDSQTNPQMQ
0801: SMSMPGSSGQ RAQQSSLTNM QNSLLSSRPG VSAPQQNIPS SMPASSLESG QGNALNNGQQ IAMGSMQQNT SQQQQVNNSS ASAQTRQGMN AGRGMFQQHS
0901: LQGQRANYPL QQLKPGSQLP VTSPQLMQGQ SPQMIQQHLS PQIDQKIAMS SVNKTGTPLQ PANSPFIVPS PSTPLAPSPM QVDSEKPSGA SSLSMGNTAR
1001: QQATGMQGVV QSLAIGTPGI SASPLLQEFI TADGNNLNPL ISISGKPSGA ELPMERLIRV VKSISPQALS SAVSDIGSVV SMVDRIAGSA PGNGSRASVG
1101: EDLVAMTKCR LQARNFMTQE GMMATKKMKR HTTAMPLSVS SLEGSVGDNY KQFACSGTSD LESTATSDGK KARTETDHAL LEEIKEINQR LLDTVVEISD
1201: DEDAADPSEG VTARKGCEGT TVKFSFIAVS LSPALKAHLS STQMSPIQPL RLLVPCSYPN GSPSLLDKLP VETSKDNEDL SSKAMARFNI LLRSLSQPMS
1301: LKDIAKTWDA CARTVICEYA QQFGGGTFSS KYGTWEKYVA AS
0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.