Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016651.1-P | Field mustard | endoplasmic reticulum, vacuole | 90.37 | 80.4 |
| CDY36587 | Canola | nucleus | 74.79 | 74.85 |
| CDX81731 | Canola | plastid | 52.35 | 74.23 |
| CDY53314 | Canola | mitochondrion, nucleus | 52.26 | 73.33 |
| CDY61379 | Canola | nucleus | 76.13 | 69.87 |
| AT1G15780.2 | Thale cress | nucleus | 76.21 | 66.62 |
| CDY53315 | Canola | nucleus | 11.39 | 60.71 |
| CDX81732 | Canola | nucleus | 11.98 | 58.85 |
| CDY33379 | Canola | cytosol | 4.02 | 58.54 |
| CDY33382 | Canola | nucleus | 15.91 | 53.07 |
| GSMUA_Achr8P09810_001 | Banana | nucleus | 4.77 | 48.31 |
| CDY35039 | Canola | cytosol | 5.53 | 47.83 |
| CDY52868 | Canola | cytosol | 5.61 | 47.52 |
| CDY19981 | Canola | cytosol | 6.7 | 45.71 |
| CDY61380 | Canola | extracellular, vacuole | 13.15 | 38.29 |
| CDY00086 | Canola | nucleus | 13.74 | 37.96 |
| CDY36589 | Canola | nucleus | 34.59 | 34.45 |
| CDY19982 | Canola | nucleus | 17.0 | 32.85 |
| CDY35787 | Canola | nucleus | 22.03 | 29.55 |
| CDY66823 | Canola | cytosol, nucleus | 21.44 | 28.51 |
| CDY00085 | Canola | nucleus | 20.52 | 28.49 |
| CDX85281 | Canola | nucleus | 21.27 | 27.55 |
| CDY36595 | Canola | cytosol | 7.54 | 26.39 |
| CDX86356 | Canola | nucleus | 20.77 | 26.27 |
| CDY19980 | Canola | nucleus | 11.98 | 24.11 |
| CDY33381 | Canola | cytosol, extracellular | 6.45 | 23.84 |
| CDY36590 | Canola | cytosol | 5.78 | 23.55 |
| CDY33380 | Canola | cytosol | 8.04 | 21.19 |
| CDY36591 | Canola | cytosol | 8.12 | 18.62 |
Protein Annotations
| EnsemblPlants:CDX83970 | EnsemblPlantsGene:GSBRNA2T00139753001 | Gene3D:1.10.246.20 | GO:A0A078D471 | InterPro:MED15_KIX | PFAM:PF16987 |
| ProteinID:CDX83970 | ProteinID:CDX83970.1 | SEG:seg | UniParc:UPI0004EF3870 | MapMan:15.3.3.3.5 | : |
Description
BnaC08g16750D
Coordinates
chrLK031834:+:1472919..1479339
Molecular Weight (calculated)
129300.0 Da
IEP (calculated)
8.520
GRAVY (calculated)
-0.595
Length
1194 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNFVVCGFVL RAANKRVGHL MDNNNWRPSL PSGDPAMETG DWRAQLPPDS RQKIVNKIME TLKKHLPYSG PEGINELRRI AARFEEKIFS GAVNQTDYLR
0101: KISMKMLTME TKSQNAAGSS STIPTANNGT SMDSTPQPLL PQTMQNNTAS VMMGSSALPS SMPPVSSMTH NNVASVVNQN SNMQNVAGML QDSSGQHGLS
0201: SNMFPGSQRQ MLGRPHAMSS QQQPQSQSAQ YLYQQQLQQQ LLKQNFGSGN VPNPSSLLPS HIQQQQQQQN VMQPNQMHSS QQSGIPTSAT QASSVSSAPL
0301: QGLHTNQQST DYDTGYASSA SIFAAKATSA ITTSLWNPSA ANFIAAAVNF SSTTAAIPND TATSCKQLRH PTEADDGTAS CWGYAAAATS AKQFISQQNS
0401: LHQQQPLGIQ SNVAGLQQPQ QQLLSSQTNQ QSVHMLSQPT AALQRTHQAG HGLFPSQGQQ SQNQPSQQQM MPLQSHHQQL QQPNLLQQDV QQRLQSSGQV
0501: TGSLLPPQNV VDHQRQLYQS QRALPEMPSS SLDSTAQTEN ANGVDWQEEA FQKIKTMKEA YLPDLNEIYQ RVTAKLQQQD SLPQQQRSEQ FEKLKQFKTM
0601: LERMIQFLSV SKTNIVPALK DKVTFYEKQI ITFLNMHRPR KPVQQGQLPQ SQMQPMQQQQ SQNVQDQSHD SQANPQMQSM SMPGSSGQRA QQSSLTNMQN
0701: SLLSSRPGVS APQQNIPSSM PASSLESGQG NALNNGQQIA MGSMQQNTSQ QQQVNNSSAS AQTRQGMNAG RGMFQQHSLQ GQRANYPLQQ LKPGSQLPVT
0801: SPQLMQGQSP QMIQQHMSPQ IDQKIAMSSV NKTGTPLQPA NSPFIVPSPS TPLAPSPMQV DSEKPSGASS LSMGNTARQQ ATGMQGVVQS LAIGTPGISA
0901: SPLLQEFITP DGNNLNPLII TSGKPSGTEL PMERLIRVVK SISPQALSSA VSDIGSVVSM VDRIAGSAPG NGSRASVGED LRHTTAMPLS VSSLEGSVGD
1001: NYKQFACSGT SDLESTATSD GKKARTETDH ALLEEIKEIN QRLIDTVVEI SDDEDAADPS EGATARKGCE GTTVKFSFIA VSLSPALKAH LSSTQMSPIQ
1101: PLRLLVPCSY PNGSPSLLDK LPVETSKENE DLSSKAMARF NILLRSLSQP MSLKDIAKTW DACARTVICE YAQQFGGGTF SSKYGTWEKY LAAS
0101: KISMKMLTME TKSQNAAGSS STIPTANNGT SMDSTPQPLL PQTMQNNTAS VMMGSSALPS SMPPVSSMTH NNVASVVNQN SNMQNVAGML QDSSGQHGLS
0201: SNMFPGSQRQ MLGRPHAMSS QQQPQSQSAQ YLYQQQLQQQ LLKQNFGSGN VPNPSSLLPS HIQQQQQQQN VMQPNQMHSS QQSGIPTSAT QASSVSSAPL
0301: QGLHTNQQST DYDTGYASSA SIFAAKATSA ITTSLWNPSA ANFIAAAVNF SSTTAAIPND TATSCKQLRH PTEADDGTAS CWGYAAAATS AKQFISQQNS
0401: LHQQQPLGIQ SNVAGLQQPQ QQLLSSQTNQ QSVHMLSQPT AALQRTHQAG HGLFPSQGQQ SQNQPSQQQM MPLQSHHQQL QQPNLLQQDV QQRLQSSGQV
0501: TGSLLPPQNV VDHQRQLYQS QRALPEMPSS SLDSTAQTEN ANGVDWQEEA FQKIKTMKEA YLPDLNEIYQ RVTAKLQQQD SLPQQQRSEQ FEKLKQFKTM
0601: LERMIQFLSV SKTNIVPALK DKVTFYEKQI ITFLNMHRPR KPVQQGQLPQ SQMQPMQQQQ SQNVQDQSHD SQANPQMQSM SMPGSSGQRA QQSSLTNMQN
0701: SLLSSRPGVS APQQNIPSSM PASSLESGQG NALNNGQQIA MGSMQQNTSQ QQQVNNSSAS AQTRQGMNAG RGMFQQHSLQ GQRANYPLQQ LKPGSQLPVT
0801: SPQLMQGQSP QMIQQHMSPQ IDQKIAMSSV NKTGTPLQPA NSPFIVPSPS TPLAPSPMQV DSEKPSGASS LSMGNTARQQ ATGMQGVVQS LAIGTPGISA
0901: SPLLQEFITP DGNNLNPLII TSGKPSGTEL PMERLIRVVK SISPQALSSA VSDIGSVVSM VDRIAGSAPG NGSRASVGED LRHTTAMPLS VSSLEGSVGD
1001: NYKQFACSGT SDLESTATSD GKKARTETDH ALLEEIKEIN QRLIDTVVEI SDDEDAADPS EGATARKGCE GTTVKFSFIA VSLSPALKAH LSSTQMSPIQ
1101: PLRLLVPCSY PNGSPSLLDK LPVETSKENE DLSSKAMARF NILLRSLSQP MSLKDIAKTW DACARTVICE YAQQFGGGTF SSKYGTWEKY LAAS
0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.