CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026748.1-P	Field mustard	cytosol	100.0	100.0
CDY33379	Canola	cytosol	23.4	40.24
CDY35039	Canola	cytosol	37.59	38.41
TraesCS1A01G346100.1	Wheat	nucleus	31.21	36.07
TraesCS1D01G348800.1	Wheat	nucleus	31.21	35.77
Os08t0523600-01	Rice	cytosol, nucleus	24.11	35.42
TraesCS1B01G359700.1	Wheat	cytosol, mitochondrion, nucleus	29.08	32.8
CDY53315	Canola	nucleus	46.1	29.02
CDX81732	Canola	nucleus	46.1	26.75
KXG25352	Sorghum	nucleus	29.08	26.28
TraesCS2B01G599400.1	Wheat	cytosol	32.62	20.44
HORVU2Hr1G123080.2	Barley	cytosol	33.33	20.35
TraesCSU01G036900.1	Wheat	cytosol	31.91	19.82
TraesCS2D01G594100.1	Wheat	cytosol	31.91	19.4
CDY36595	Canola	cytosol	46.1	19.06
TraesCS2B01G598700.1	Wheat	cytosol	31.21	18.97
GSMUA_Achr8P09800_001	Banana	nucleus	16.31	16.43
HORVU5Hr1G125120.1	Barley	cytosol	28.37	16.0
CDY33381	Canola	cytosol, extracellular	31.91	13.93
CDY33380	Canola	cytosol	39.72	12.36
TraesCS7D01G546200.1	Wheat	nucleus	29.79	11.63
CDY36590	Canola	cytosol	24.11	11.6
TraesCS7B01G493100.1	Wheat	nucleus	29.79	11.32
CDY36591	Canola	cytosol	39.01	10.56
TraesCS5D01G551100.1	Wheat	nucleus	31.91	10.49
OQU80675	Sorghum	nucleus	31.21	10.35
TraesCS7B01G495400.1	Wheat	cytosol	29.08	10.15
TraesCS4A01G315600.1	Wheat	nucleus	34.04	9.94
VIT_08s0040g00740.t01	Wine grape	nucleus	24.82	8.6
TraesCS1B01G433100.1	Wheat	nucleus	36.17	8.39
TraesCS1A01G403500.2	Wheat	nucleus	35.46	8.28
TraesCS1D01G411400.1	Wheat	nucleus	35.46	8.22
HORVU5Hr1G106220.2	Barley	cytosol, nucleus	28.37	7.19
CDX83970	Canola	mitochondrion	47.52	5.61
CDY36587	Canola	nucleus	43.26	5.11
CDY36589	Canola	nucleus	41.84	4.92
CDY61379	Canola	nucleus	43.97	4.77
HORVU7Hr1G118370.1	Barley	nucleus	38.3	4.42
TraesCS7A01G283500.3	Wheat	nucleus	39.72	4.28
HORVU7Hr1G060970.1	Barley	nucleus	39.72	4.27
TraesCS7D01G281700.2	Wheat	nucleus	39.72	4.27
TraesCS7B01G177500.1	Wheat	nucleus	39.72	4.26
TraesCS7D01G526100.1	Wheat	nucleus	37.59	4.07
TraesCS7A01G540000.1	Wheat	nucleus	37.59	4.07
TraesCS7B01G460900.1	Wheat	nucleus	37.59	4.07
Zm00001d031863_P013	Maize	nucleus	37.59	4.05
EES14038	Sorghum	nucleus	36.88	3.96
Os08t0564800-01	Rice	extracellular	36.88	3.94
CDY33382	Canola	nucleus	9.93	3.91
Zm00001d049894_P011	Maize	nucleus	36.17	3.9
CDY19982	Canola	nucleus	14.18	3.24
CDY00085	Canola	nucleus	19.15	3.14
CDY66823	Canola	cytosol, nucleus	19.15	3.01
CDY35787	Canola	nucleus	18.44	2.92
CDX86356	Canola	nucleus	17.02	2.54
CDY19980	Canola	nucleus	10.64	2.53
CDX85281	Canola	nucleus	15.6	2.39
CDY61380	Canola	extracellular, vacuole	1.42	0.49
CDX81731	Canola	plastid	1.42	0.24
CDY53314	Canola	mitochondrion, nucleus	1.42	0.24
CDY19981	Canola	cytosol	0.0	0.0
CDY00086	Canola	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDY52868	EnsemblPlantsGene:GSBRNA2T00008024001	Gene3D:1.10.246.20	GO:A0A078IV40	InterPro:MED15_KIX	PANTHER:PTHR33137
PANTHER:PTHR33137:SF4	PFAM:PF16987	ProteinID:CDY52868	ProteinID:CDY52868.1	UniParc:UPI0002542CB2	UniProt:A0A078IV40
MapMan:35.1	:	:	:	:	:

Description

BnaA09g56600DBnaA09g56600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IV40]

Coordinates

chrLK033137:+:76127..78130

Molecular Weight (calculated)

15879.0 Da

IEP (calculated)

6.798

GRAVY (calculated)

-0.516

Length

141 amino acids

Sequence
(BLAST)

001: MGGEPFLLHN GEPAMATYDW KTQLSFITRQ KIVNKILDTL KKVIPLSGQE GINELWRIAV RFEEKVFRGA ANRTDYLRKI SLKMLTLEGR RYNAPGSSSS
101: IPADNNTRPL EVDMGHLMIN DNSETSLLNE EPSMNTCEGG H

Best Arabidopsis Sequence Match ( AT1G15780.1 )
(BLAST)

0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.