Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G599400.1 | Wheat | cytosol | 89.66 | 92.44 |
| TraesCS2D01G594100.1 | Wheat | cytosol | 91.38 | 91.38 |
| TraesCSU01G036900.1 | Wheat | cytosol | 88.36 | 90.31 |
| HORVU2Hr1G123080.2 | Barley | cytosol | 83.19 | 83.55 |
| TraesCS1B01G359700.1 | Wheat | cytosol, mitochondrion, nucleus | 31.47 | 58.4 |
| GSMUA_Achr8P09790_001 | Banana | cytosol | 18.53 | 53.75 |
| Os08t0523600-01 | Rice | cytosol, nucleus | 21.55 | 52.08 |
| VIT_13s0067g02230.t01 | Wine grape | mitochondrion | 16.38 | 41.76 |
| KXG25352 | Sorghum | nucleus | 26.72 | 39.74 |
| Bra026748.1-P | Field mustard | cytosol | 18.97 | 31.21 |
| CDY52868 | Canola | cytosol | 18.97 | 31.21 |
| TraesCS7B01G493100.1 | Wheat | nucleus | 34.91 | 21.83 |
| TraesCS7B01G495400.1 | Wheat | cytosol | 34.48 | 19.8 |
| OQU80675 | Sorghum | nucleus | 34.91 | 19.06 |
| CDY33381 | Canola | cytosol, extracellular | 24.57 | 17.65 |
| CDY36590 | Canola | cytosol | 19.83 | 15.7 |
| TraesCS1B01G433100.1 | Wheat | nucleus | 39.22 | 14.97 |
| KRH52764 | Soybean | nucleus | 12.07 | 11.48 |
| CDY33382 | Canola | nucleus | 15.09 | 9.78 |
| TraesCS7B01G177500.1 | Wheat | nucleus | 54.31 | 9.58 |
| Zm00001d031863_P013 | Maize | nucleus | 50.86 | 9.02 |
| EES14038 | Sorghum | nucleus | 50.43 | 8.9 |
| Zm00001d049894_P011 | Maize | nucleus | 49.57 | 8.79 |
| Os08t0564800-01 | Rice | extracellular | 50.0 | 8.79 |
| TraesCS7B01G460900.1 | Wheat | nucleus | 48.28 | 8.6 |
| GSMUA_Achr11P... | Banana | nucleus | 43.1 | 7.83 |
| GSMUA_Achr8P09780_001 | Banana | nucleus | 41.81 | 7.19 |
| PGSC0003DMT400082469 | Potato | extracellular | 3.02 | 7.07 |
| Bra036204.1-P | Field mustard | nucleus | 16.81 | 6.31 |
| CDY19982 | Canola | nucleus | 16.38 | 6.15 |
| Bra026105.1-P | Field mustard | cytosol | 26.29 | 5.79 |
| CDY35787 | Canola | nucleus | 21.55 | 5.62 |
| CDY66823 | Canola | cytosol, nucleus | 20.69 | 5.35 |
| Bra040585.1-P | Field mustard | nucleus | 20.69 | 5.34 |
| KRH20610 | Soybean | cytosol | 15.95 | 5.27 |
| CDY00085 | Canola | nucleus | 17.67 | 4.77 |
| CDY19980 | Canola | nucleus | 12.07 | 4.72 |
| CDX86356 | Canola | nucleus | 18.53 | 4.56 |
| Bra025408.1-P | Field mustard | nucleus | 20.26 | 4.46 |
| CDX85281 | Canola | nucleus | 17.67 | 4.45 |
| AT2G10440.1 | Thale cress | nucleus | 15.95 | 3.96 |
| CDX81731 | Canola | plastid | 10.78 | 2.97 |
| CDY19981 | Canola | cytosol | 1.72 | 2.29 |
| AT1G15770.1 | Thale cress | cytosol | 1.29 | 1.02 |
| KRH45070 | Soybean | cytosol | 0.43 | 0.97 |
| KRH08040 | Soybean | cytosol | 0.43 | 0.97 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G598700.1 | EnsemblPlantsGene:TraesCS2B01G598700 | Gene3D:1.10.246.20 | GO:GO:0003674 | GO:GO:0003712 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:KIX_dom_sf |
| InterPro:MED15_KIX | PANTHER:PTHR33137 | PANTHER:PTHR33137:SF4 | PFAM:PF16987 | SEG:seg | SUPFAM:SSF47040 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:781773043..781776241
Molecular Weight (calculated)
25353.3 Da
IEP (calculated)
7.346
GRAVY (calculated)
-0.458
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MDANWAVGVG VDLNAPPPTG DDDWRAQFQP EARSRVVNKI MECLKKHLPV SVPEGLNELQ IIAVRFEDKI YTAATSQSDY LRKISLKMLS METKAQQAPG
101: NAQVIPNQMN LGQASCLRMP DGTPWRPTQG PDPAAVAAAD AAVTAADGVD PNAPAPTGGD WRPQLQPEAR SRIVNKIMEC LKKHLPVSVP EGLNELQKIA
201: VRSEEKIYTA ATSQSDYLRK ISLKIQSMEK NT
101: NAQVIPNQMN LGQASCLRMP DGTPWRPTQG PDPAAVAAAD AAVTAADGVD PNAPAPTGGD WRPQLQPEAR SRIVNKIMEC LKKHLPVSVP EGLNELQKIA
201: VRSEEKIYTA ATSQSDYLRK ISLKIQSMEK NT
001: MDTTGDWRTQ FPSASRSRIV NKIMETQLKQ LPFIRPEGTN ELRKIAVRFE EKLFNNASNQ TEYLRQICMK MLNMETKSQN AAGSSSADDN TPPLVPEPSV
101: PNNEPAVNTG DWRTQQPQDS RQKNINALLD TLKKIVPHSG KEGIDELMRI AVSLEELIFN SAINQEDYLG KISLKMRTM
101: PNNEPAVNTG DWRTQQPQDS RQKNINALLD TLKKIVPHSG KEGIDELMRI AVSLEELIFN SAINQEDYLG KISLKMRTM
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (sour /.../BI BLink). [Source:TAIR;Acc:AT1G15790]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.