Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G036900.1 | Wheat | cytosol | 92.24 | 94.27 |
| TraesCS2B01G598700.1 | Wheat | cytosol | 91.38 | 91.38 |
| TraesCS2B01G599400.1 | Wheat | cytosol | 87.93 | 90.67 |
| HORVU2Hr1G123080.2 | Barley | cytosol | 87.93 | 88.31 |
| TraesCS1D01G348800.1 | Wheat | nucleus | 31.9 | 60.16 |
| GSMUA_Achr8P09790_001 | Banana | cytosol | 18.53 | 53.75 |
| Os08t0523600-01 | Rice | cytosol, nucleus | 21.98 | 53.12 |
| VIT_13s0067g02230.t01 | Wine grape | mitochondrion | 16.81 | 42.86 |
| KXG25352 | Sorghum | nucleus | 27.59 | 41.03 |
| Bra026748.1-P | Field mustard | cytosol | 19.4 | 31.91 |
| CDY52868 | Canola | cytosol | 19.4 | 31.91 |
| TraesCS7D01G546200.1 | Wheat | nucleus | 34.05 | 21.88 |
| OQU80675 | Sorghum | nucleus | 36.21 | 19.76 |
| TraesCS5D01G551100.1 | Wheat | nucleus | 35.78 | 19.35 |
| CDY33381 | Canola | cytosol, extracellular | 26.29 | 18.89 |
| CDY36590 | Canola | cytosol | 21.55 | 17.06 |
| TraesCS1D01G411400.1 | Wheat | nucleus | 37.93 | 14.47 |
| KRH52764 | Soybean | nucleus | 12.5 | 11.89 |
| CDY33382 | Canola | nucleus | 15.95 | 10.34 |
| TraesCS7D01G281700.2 | Wheat | nucleus | 56.03 | 9.9 |
| Zm00001d031863_P013 | Maize | nucleus | 53.02 | 9.4 |
| EES14038 | Sorghum | nucleus | 52.59 | 9.28 |
| Zm00001d049894_P011 | Maize | nucleus | 51.72 | 9.17 |
| Os08t0564800-01 | Rice | extracellular | 51.72 | 9.09 |
| PGSC0003DMT400082469 | Potato | extracellular | 3.88 | 9.09 |
| TraesCS7D01G526100.1 | Wheat | nucleus | 50.86 | 9.07 |
| GSMUA_Achr11P... | Banana | nucleus | 43.97 | 7.99 |
| GSMUA_Achr8P09780_001 | Banana | nucleus | 42.67 | 7.34 |
| Bra036204.1-P | Field mustard | nucleus | 16.81 | 6.31 |
| Bra026105.1-P | Field mustard | cytosol | 28.45 | 6.27 |
| CDY19982 | Canola | nucleus | 16.38 | 6.15 |
| CDY35787 | Canola | nucleus | 21.98 | 5.73 |
| CDY66823 | Canola | cytosol, nucleus | 21.12 | 5.46 |
| Bra040585.1-P | Field mustard | nucleus | 21.12 | 5.45 |
| KRH20610 | Soybean | cytosol | 16.38 | 5.41 |
| CDY19980 | Canola | nucleus | 12.5 | 4.89 |
| CDY00085 | Canola | nucleus | 18.1 | 4.88 |
| CDX86356 | Canola | nucleus | 18.97 | 4.66 |
| CDX85281 | Canola | nucleus | 18.1 | 4.56 |
| Bra025408.1-P | Field mustard | nucleus | 20.69 | 4.55 |
| AT2G10440.1 | Thale cress | nucleus | 16.38 | 4.06 |
| CDX81731 | Canola | plastid | 11.64 | 3.21 |
| CDY19981 | Canola | cytosol | 1.72 | 2.29 |
| AT1G15770.1 | Thale cress | cytosol | 1.29 | 1.02 |
| KRH45070 | Soybean | cytosol | 0.43 | 0.97 |
| KRH08040 | Soybean | cytosol | 0.43 | 0.97 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G594100.1 | EnsemblPlantsGene:TraesCS2D01G594100 | Gene3D:1.10.246.20 | GO:GO:0003674 | GO:GO:0003712 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:KIX_dom_sf |
| InterPro:MED15_KIX | PANTHER:PTHR33137 | PANTHER:PTHR33137:SF4 | PFAM:PF16987 | SEG:seg | SUPFAM:SSF47040 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:648165658..648170505
Molecular Weight (calculated)
25030.1 Da
IEP (calculated)
7.346
GRAVY (calculated)
-0.323
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MDANWGVGVG VDLNAPPPTG GEDWRAQLLP EARSRVVNKI MECLKKHLPV SVPEGLNELQ IIAVRFEDKI YTAATSQSDY LRKISLKMLS METKTQQAPG
101: NAQVIPNQMN LGQASCLRMP DGTPWRPTQG SDPAAVAAAV AAAAAATGVD PNAPAPTGGD WRPQLQPEAR SRIVNKIMEC LKKHLPVSGP EGLNELEKIA
201: VGFEEKIYAA ATSQSDYLRK VSLKMLSMET NT
101: NAQVIPNQMN LGQASCLRMP DGTPWRPTQG SDPAAVAAAV AAAAAATGVD PNAPAPTGGD WRPQLQPEAR SRIVNKIMEC LKKHLPVSGP EGLNELEKIA
201: VGFEEKIYAA ATSQSDYLRK VSLKMLSMET NT
001: MDTTGDWRTQ FPSASRSRIV NKIMETQLKQ LPFIRPEGTN ELRKIAVRFE EKLFNNASNQ TEYLRQICMK MLNMETKSQN AAGSSSADDN TPPLVPEPSV
101: PNNEPAVNTG DWRTQQPQDS RQKNINALLD TLKKIVPHSG KEGIDELMRI AVSLEELIFN SAINQEDYLG KISLKMRTM
101: PNNEPAVNTG DWRTQQPQDS RQKNINALLD TLKKIVPHSG KEGIDELMRI AVSLEELIFN SAINQEDYLG KISLKMRTM
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (sour /.../BI BLink). [Source:TAIR;Acc:AT1G15790]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.