Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P09790_001 | Banana | cytosol | 5.26 | 88.75 |
| GSMUA_Achr11P... | Banana | nucleus | 74.28 | 78.47 |
| GSMUA_Achr8P09810_001 | Banana | nucleus | 6.15 | 70.34 |
| HORVU7Hr1G060970.1 | Barley | nucleus | 54.26 | 55.75 |
| TraesCS7D01G281700.2 | Wheat | nucleus | 54.19 | 55.67 |
| TraesCS7A01G283500.3 | Wheat | nucleus | 53.82 | 55.55 |
| Os08t0564800-01 | Rice | extracellular | 54.34 | 55.53 |
| TraesCS7B01G177500.1 | Wheat | nucleus | 54.04 | 55.44 |
| EES14038 | Sorghum | nucleus | 53.97 | 55.4 |
| Zm00001d049894_P011 | Maize | nucleus | 52.93 | 54.59 |
| TraesCS7D01G526100.1 | Wheat | nucleus | 52.63 | 54.57 |
| TraesCS7A01G540000.1 | Wheat | nucleus | 52.34 | 54.22 |
| TraesCS7B01G460900.1 | Wheat | nucleus | 52.26 | 54.11 |
| TraesCS1D01G348800.1 | Wheat | nucleus | 4.89 | 53.66 |
| Zm00001d031863_P013 | Maize | nucleus | 51.82 | 53.44 |
| HORVU7Hr1G118370.1 | Barley | nucleus | 48.11 | 53.07 |
| TraesCS1A01G346100.1 | Wheat | nucleus | 4.74 | 52.46 |
| TraesCS1B01G359700.1 | Wheat | cytosol, mitochondrion, nucleus | 4.74 | 51.2 |
| TraesCS5D01G551100.1 | Wheat | nucleus | 15.79 | 49.65 |
| TraesCS4A01G315600.1 | Wheat | nucleus | 17.35 | 48.45 |
| TraesCS1D01G411400.1 | Wheat | nucleus | 21.5 | 47.7 |
| TraesCS7B01G495400.1 | Wheat | cytosol | 14.16 | 47.28 |
| TraesCS7D01G546200.1 | Wheat | nucleus | 12.6 | 47.09 |
| TraesCS7B01G493100.1 | Wheat | nucleus | 12.9 | 46.9 |
| TraesCS1B01G433100.1 | Wheat | nucleus | 21.13 | 46.88 |
| TraesCS1A01G403500.2 | Wheat | nucleus | 20.9 | 46.69 |
| GSMUA_Achr11P... | Banana | nucleus | 25.43 | 45.49 |
| VIT_13s0067g02230.t01 | Wine grape | mitochondrion | 3.04 | 45.05 |
| HORVU2Hr1G123080.2 | Barley | cytosol | 7.56 | 44.16 |
| TraesCS2B01G599400.1 | Wheat | cytosol | 7.26 | 43.56 |
| Os08t0523600-01 | Rice | cytosol, nucleus | 3.04 | 42.71 |
| TraesCS2D01G594100.1 | Wheat | cytosol | 7.34 | 42.67 |
| HORVU5Hr1G106220.2 | Barley | cytosol, nucleus | 17.49 | 42.45 |
| TraesCSU01G036900.1 | Wheat | cytosol | 7.12 | 42.29 |
| TraesCS2B01G598700.1 | Wheat | cytosol | 7.19 | 41.81 |
| HORVU5Hr1G125120.1 | Barley | cytosol | 7.41 | 40.0 |
| OQU80675 | Sorghum | nucleus | 12.6 | 40.0 |
| GSMUA_Achr8P09800_001 | Banana | nucleus | 4.0 | 38.57 |
| KXG25352 | Sorghum | nucleus | 4.37 | 37.82 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P09780_001 | EnsemblPlants:GSMUA_Achr8T09780_001 | EnsemblPlantsGene:GSMUA_Achr8G09780_001 | Gene3D:1.10.246.20 | InterPro:MED15_KIX | ncoils:Coil |
| PFAM:PF16987 | SEG:seg | UniParc:UPI000296F882 | UniProt:M0TP31 | MapMan:15.3.3.3.5 | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G09780_001]
Coordinates
chr8:-:6897580..6917902
Molecular Weight (calculated)
148700.0 Da
IEP (calculated)
9.954
GRAVY (calculated)
-0.728
Length
1349 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGNSWRPAQ GESAAASDGG SGDWRTQLQP EARHRIVNKI METLKRHLPI SVPEGINELQ KIAIRFEEKI YTAASNQPDY LRKISLKMLS MENKSQHSAS
0101: INPSISNSAV LNQNSADPAN QGQPLSVSMV NQPSARQQIL SQNIQNNTLA MAQNPANLSS ALSSITGLSQ SNISGVSQIS NLQNMPGISQ NSANNSLGQT
0201: AAPDLYSNTQ RPMQGRQQQQ QLISQQQHQT QNQLLYQHQF QQQYMKQKFQ QSSLLQPHVQ QQQSLMQTTQ LQSSQQPLMQ IGSNFQSGQS AMQQTQPGAI
0301: QSAVQPGLQQ NQLSTVQKSA PSLLQQHPQS IARQQQQSQS AMLQQSTSMQ QQPTSAPQQS NLPMQQHQQQ QIIGQQTNIS NVQQTQLIGQ QTSATEMQQS
0401: QRVSIQQNNL LNMQQPHHLL NQHQQQQLGN QSNMSGLQQQ QQQQQQQQIL GSLSNVSNMQ PHQRPMHIHQ QPKTTIQQQQ QNQQAPLAML QPQGQQPQHQ
0501: SSQQQLLSQF QSQPASLQQQ LVQQHPSSMQ REMQQRIQAS GLLSQNAIEQ QKQFVQSQIG LQEVSSSKAL DSSAQTGHVG IIDWQEEIYQ KIKSMKELYF
0601: ADLTELYQKI VLKLQQHDVL MPSVKTSEQF DKMKSYKIML ERTLHILQLP RSNIQLGLKD KLPLYEKQIT TFLATNKKKV VPSQPPGQQQ FQHPGGHPQS
0701: MSQQQSSQVP QVQQHDNYAN QQMNLQGSTT SVQPAAMPSM QHGSVPLSTH FGVPTPQQNM TNALQTGSAI DSAQGSSFSS LQQGGIASMQ QGGLVSGQGS
0801: INVPPQTNAN VMSNGSMNSL QNNINSKQPS SNAIQQQHFK QEQQQQQQQH MQNQQLKQQF QQRNMQQQII QQQQKQQLLQ LPVHQLSQLN QSNEINELKF
0901: RQGPGVKPGL YQQHFLPNQR HSYYQQLKSG AAFPISSPQN FQASSPQISH HSSPQLDQHS LLSSQIKTGT PLQSANSPFD PSPSTPIAPS PIPGDEKQIS
1001: GITSVPNAGR VGHQPTAVAP QAQSLAVTTP GISASPLLAE FTSPDGNQTN HTNSGAAKAI TTERPFERLI KVIRSSTPKA LSSAVSDIGS VVSMIDRIAG
1101: SAPAPGNGSR AAVGEDLVAM TKCRLQARSF MSQDGSATTK KMKRDTSAMP LNNVSSAGSV NDSFKHSYGL DTSELESTAT SRVKRQKVEV NHALLEEIRE
1201: INQRLIGTVV NISEEDTDSN SAAPQGEGTI VKCVFTTVAL CPSLKSQFAS EHMSPILPLR LLVPANYPKC SPVLLDKFPD EQRESDDLSV KARSTFIISL
1301: RGLSQPMSLG EMARTWDVSA RKVITEYARQ TGGGTFSSRY GAWENCVAA
0101: INPSISNSAV LNQNSADPAN QGQPLSVSMV NQPSARQQIL SQNIQNNTLA MAQNPANLSS ALSSITGLSQ SNISGVSQIS NLQNMPGISQ NSANNSLGQT
0201: AAPDLYSNTQ RPMQGRQQQQ QLISQQQHQT QNQLLYQHQF QQQYMKQKFQ QSSLLQPHVQ QQQSLMQTTQ LQSSQQPLMQ IGSNFQSGQS AMQQTQPGAI
0301: QSAVQPGLQQ NQLSTVQKSA PSLLQQHPQS IARQQQQSQS AMLQQSTSMQ QQPTSAPQQS NLPMQQHQQQ QIIGQQTNIS NVQQTQLIGQ QTSATEMQQS
0401: QRVSIQQNNL LNMQQPHHLL NQHQQQQLGN QSNMSGLQQQ QQQQQQQQIL GSLSNVSNMQ PHQRPMHIHQ QPKTTIQQQQ QNQQAPLAML QPQGQQPQHQ
0501: SSQQQLLSQF QSQPASLQQQ LVQQHPSSMQ REMQQRIQAS GLLSQNAIEQ QKQFVQSQIG LQEVSSSKAL DSSAQTGHVG IIDWQEEIYQ KIKSMKELYF
0601: ADLTELYQKI VLKLQQHDVL MPSVKTSEQF DKMKSYKIML ERTLHILQLP RSNIQLGLKD KLPLYEKQIT TFLATNKKKV VPSQPPGQQQ FQHPGGHPQS
0701: MSQQQSSQVP QVQQHDNYAN QQMNLQGSTT SVQPAAMPSM QHGSVPLSTH FGVPTPQQNM TNALQTGSAI DSAQGSSFSS LQQGGIASMQ QGGLVSGQGS
0801: INVPPQTNAN VMSNGSMNSL QNNINSKQPS SNAIQQQHFK QEQQQQQQQH MQNQQLKQQF QQRNMQQQII QQQQKQQLLQ LPVHQLSQLN QSNEINELKF
0901: RQGPGVKPGL YQQHFLPNQR HSYYQQLKSG AAFPISSPQN FQASSPQISH HSSPQLDQHS LLSSQIKTGT PLQSANSPFD PSPSTPIAPS PIPGDEKQIS
1001: GITSVPNAGR VGHQPTAVAP QAQSLAVTTP GISASPLLAE FTSPDGNQTN HTNSGAAKAI TTERPFERLI KVIRSSTPKA LSSAVSDIGS VVSMIDRIAG
1101: SAPAPGNGSR AAVGEDLVAM TKCRLQARSF MSQDGSATTK KMKRDTSAMP LNNVSSAGSV NDSFKHSYGL DTSELESTAT SRVKRQKVEV NHALLEEIRE
1201: INQRLIGTVV NISEEDTDSN SAAPQGEGTI VKCVFTTVAL CPSLKSQFAS EHMSPILPLR LLVPANYPKC SPVLLDKFPD EQRESDDLSV KARSTFIISL
1301: RGLSQPMSLG EMARTWDVSA RKVITEYARQ TGGGTFSSRY GAWENCVAA
0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.