Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P09790_001 | Banana | cytosol | 4.93 | 78.75 |
| GSMUA_Achr8P09780_001 | Banana | nucleus | 78.47 | 74.28 |
| GSMUA_Achr8P09810_001 | Banana | nucleus | 6.58 | 71.19 |
| TraesCS1D01G348800.1 | Wheat | nucleus | 5.4 | 56.1 |
| TraesCS1A01G346100.1 | Wheat | nucleus | 5.25 | 54.92 |
| TraesCS1B01G359700.1 | Wheat | cytosol, mitochondrion, nucleus | 5.25 | 53.6 |
| TraesCS7B01G177500.1 | Wheat | nucleus | 54.89 | 53.31 |
| TraesCS7A01G283500.3 | Wheat | nucleus | 54.35 | 53.1 |
| EES14038 | Sorghum | nucleus | 54.58 | 53.04 |
| TraesCS7D01G281700.2 | Wheat | nucleus | 54.42 | 52.93 |
| HORVU7Hr1G060970.1 | Barley | nucleus | 54.03 | 52.55 |
| Os08t0564800-01 | Rice | extracellular | 54.11 | 52.35 |
| Zm00001d049894_P011 | Maize | nucleus | 53.48 | 52.22 |
| Zm00001d031863_P013 | Maize | nucleus | 52.7 | 51.45 |
| TraesCS7D01G526100.1 | Wheat | nucleus | 52.31 | 51.35 |
| TraesCS7A01G540000.1 | Wheat | nucleus | 52.31 | 51.31 |
| TraesCS7B01G460900.1 | Wheat | nucleus | 52.08 | 51.04 |
| TraesCS5D01G551100.1 | Wheat | nucleus | 16.99 | 50.58 |
| TraesCS4A01G315600.1 | Wheat | nucleus | 18.72 | 49.48 |
| HORVU7Hr1G118370.1 | Barley | nucleus | 47.38 | 49.47 |
| TraesCS7D01G546200.1 | Wheat | nucleus | 13.16 | 46.54 |
| TraesCS7B01G493100.1 | Wheat | nucleus | 13.31 | 45.82 |
| TraesCS1D01G411400.1 | Wheat | nucleus | 21.61 | 45.39 |
| TraesCS7B01G495400.1 | Wheat | cytosol | 14.33 | 45.3 |
| TraesCS1A01G403500.2 | Wheat | nucleus | 21.3 | 45.03 |
| HORVU2Hr1G123080.2 | Barley | cytosol | 8.14 | 45.02 |
| TraesCS1B01G433100.1 | Wheat | nucleus | 21.22 | 44.57 |
| TraesCS2B01G599400.1 | Wheat | cytosol | 7.75 | 44.0 |
| TraesCS2D01G594100.1 | Wheat | cytosol | 7.99 | 43.97 |
| GSMUA_Achr11P... | Banana | nucleus | 25.92 | 43.9 |
| Os08t0523600-01 | Rice | cytosol, nucleus | 3.29 | 43.75 |
| TraesCS2B01G598700.1 | Wheat | cytosol | 7.83 | 43.1 |
| VIT_13s0067g02230.t01 | Wine grape | mitochondrion | 3.05 | 42.86 |
| HORVU5Hr1G106220.2 | Barley | cytosol, nucleus | 18.64 | 42.81 |
| TraesCSU01G036900.1 | Wheat | cytosol | 7.6 | 42.73 |
| HORVU5Hr1G125120.1 | Barley | cytosol | 8.22 | 42.0 |
| OQU80675 | Sorghum | nucleus | 13.0 | 39.06 |
| GSMUA_Achr8P09800_001 | Banana | nucleus | 4.15 | 37.86 |
| KXG25352 | Sorghum | nucleus | 4.62 | 37.82 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P20270_001 | EnsemblPlants:GSMUA_Achr11T20270_001 | EnsemblPlantsGene:GSMUA_Achr11G20270_001 | Gene3D:1.10.246.20 | InterPro:MED15_KIX | ncoils:Coil |
| PFAM:PF16987 | SEG:seg | UniParc:UPI0002948878 | UniProt:M0RTV7 | MapMan:15.3.3.3.5 | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G20270_001]
Coordinates
chr11:-:21268306..21289594
Molecular Weight (calculated)
140637.0 Da
IEP (calculated)
9.705
GRAVY (calculated)
-0.668
Length
1277 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGNSWRPAQ GEPAAASDGG SVDWRTQLQP EARHRIVNKI METLKRHLPI SVPEGLNELQ KIAIRFEEKI YTAAANQSDY LRKISLKMLS MESKSQHSAS
0101: INPSMSNSTI TNQNPVDSAL LGVQSQIMVN QPSTRQQLLP QNIQNNNSVT AQSSANIPSA LSSIAVPDIY TNAQRQMQGR QQQQQIISQQ QHQSQNQFLY
0201: QHQLQQQIFN QKLQHSPLLQ PHVQQPQQPM LKTTQLQSSQ QPLMQMTSNL QSGQSTIQQM QPGAIQSAVQ PGLQQNQLNS VQQSVPSVLQ QRPQSVARQQ
0301: QQQQPTILQQ AASLQQQQQQ QQPTSAPQQS NLPVQQHQQQ LMAQQANISN VQQTQLLGQQ ASVTEMQQQP QRIPVQQNNL LSMQQPQHLL NQQNISLHQQ
0401: QQFGTQSNVS VLQQSQQQQQ QQQLLGSLSN VSNMQPHQRS MHMLQQPKTS VQQQQQNQQS SLAMLQPQGQ QPQHQSSQHQ LISQFQSQPA SLQHQLGQHP
0501: GSLQREMQQR IQVSGALLSQ NAIEQQKQFG QPQVGLPEVS SSTSLDSTAQ TGHGGVVDWQ EEIYQKIKSM KELYFAELSE LYQRIVLKLQ QQDALMPSVK
0601: TSEQFDKIKS FKLILERTLQ FLQLSKNNIQ SGLKDKLPIY EKQIVNLLAS NKKKVIPSQQ PGQQQFQHPG VPSQSMPQQQ PSQVPQLQQN DNYTNQQMNL
0701: QGSMTSMQTA AVPSMQQGSV PLSTHFGVPT PQQNITNALQ TGSTIDTVQG SSFSSLQQGA IASIQQGGLV SGQTATARAT TTATASNAKS TNEAAQQLQQ
0801: QQQQQKQQHT PQIPIHQIPQ LHQTNEVNEL KLRQGAGIKP GLYPQNYSAG QRHNYYQQLK NAAAFPNSSP QNFQASSPQI SHHSSQLDQH TLLSSQIKSG
0901: TPLQSANSPF VASPSTPIAS SPIPGESEKH SGITSLPNHT RHQQTAIAPP QAQSINVATP GISASPLLAE FTSPDGNQSS LPNSVVGKSN KAERPLERLI
1001: EVIRSSTPKA LRSAVSDIGS VVSMIDRIAG SAPGNGSRVA VGEDLVAMTK CRLQAKSFMS QDGSATTKKM KRDTSAMPLN NVSSAGSFND SFKQSYGLDN
1101: SELESTATSR VKRQKVEVNH ALVEEIREIN LRLVDTVVSI SEEETDSSSA ALEGEGTVVK CSFTAVALCE SLKSQFASEH MSPILPLRLL VPVSYPKCSP
1201: VLLDKLPDDQ RESDDLSVKA KSRFIISLRA LSQPMSLGEM ARTWDACVRK VITEFAQQTG GGTFSSRYGA WENCISA
0101: INPSMSNSTI TNQNPVDSAL LGVQSQIMVN QPSTRQQLLP QNIQNNNSVT AQSSANIPSA LSSIAVPDIY TNAQRQMQGR QQQQQIISQQ QHQSQNQFLY
0201: QHQLQQQIFN QKLQHSPLLQ PHVQQPQQPM LKTTQLQSSQ QPLMQMTSNL QSGQSTIQQM QPGAIQSAVQ PGLQQNQLNS VQQSVPSVLQ QRPQSVARQQ
0301: QQQQPTILQQ AASLQQQQQQ QQPTSAPQQS NLPVQQHQQQ LMAQQANISN VQQTQLLGQQ ASVTEMQQQP QRIPVQQNNL LSMQQPQHLL NQQNISLHQQ
0401: QQFGTQSNVS VLQQSQQQQQ QQQLLGSLSN VSNMQPHQRS MHMLQQPKTS VQQQQQNQQS SLAMLQPQGQ QPQHQSSQHQ LISQFQSQPA SLQHQLGQHP
0501: GSLQREMQQR IQVSGALLSQ NAIEQQKQFG QPQVGLPEVS SSTSLDSTAQ TGHGGVVDWQ EEIYQKIKSM KELYFAELSE LYQRIVLKLQ QQDALMPSVK
0601: TSEQFDKIKS FKLILERTLQ FLQLSKNNIQ SGLKDKLPIY EKQIVNLLAS NKKKVIPSQQ PGQQQFQHPG VPSQSMPQQQ PSQVPQLQQN DNYTNQQMNL
0701: QGSMTSMQTA AVPSMQQGSV PLSTHFGVPT PQQNITNALQ TGSTIDTVQG SSFSSLQQGA IASIQQGGLV SGQTATARAT TTATASNAKS TNEAAQQLQQ
0801: QQQQQKQQHT PQIPIHQIPQ LHQTNEVNEL KLRQGAGIKP GLYPQNYSAG QRHNYYQQLK NAAAFPNSSP QNFQASSPQI SHHSSQLDQH TLLSSQIKSG
0901: TPLQSANSPF VASPSTPIAS SPIPGESEKH SGITSLPNHT RHQQTAIAPP QAQSINVATP GISASPLLAE FTSPDGNQSS LPNSVVGKSN KAERPLERLI
1001: EVIRSSTPKA LRSAVSDIGS VVSMIDRIAG SAPGNGSRVA VGEDLVAMTK CRLQAKSFMS QDGSATTKKM KRDTSAMPLN NVSSAGSFND SFKQSYGLDN
1101: SELESTATSR VKRQKVEVNH ALVEEIREIN LRLVDTVVSI SEEETDSSSA ALEGEGTVVK CSFTAVALCE SLKSQFASEH MSPILPLRLL VPVSYPKCSP
1201: VLLDKLPDDQ RESDDLSVKA KSRFIISLRA LSQPMSLGEM ARTWDACVRK VITEFAQQTG GGTFSSRYGA WENCISA
0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.