Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G540000.1 | Wheat | nucleus | 97.92 | 97.85 |
| TraesCS7B01G460900.1 | Wheat | nucleus | 97.62 | 97.47 |
| TraesCS7D01G281700.2 | Wheat | nucleus | 88.93 | 88.12 |
| HORVU7Hr1G118370.1 | Barley | nucleus | 80.94 | 86.1 |
| Os08t0564800-01 | Rice | extracellular | 79.17 | 78.03 |
| TraesCS7D01G546200.1 | Wheat | nucleus | 21.6 | 77.84 |
| EES14038 | Sorghum | nucleus | 77.33 | 76.56 |
| TraesCS1D01G411400.1 | Wheat | nucleus | 35.59 | 76.15 |
| TraesCS5D01G551100.1 | Wheat | nucleus | 24.98 | 75.76 |
| Zm00001d049894_P011 | Maize | nucleus | 74.25 | 73.85 |
| Zm00001d031863_P013 | Maize | nucleus | 73.71 | 73.32 |
| TraesCS1D01G348800.1 | Wheat | nucleus | 6.69 | 70.73 |
| PGSC0003DMT400082469 | Potato | extracellular | 4.69 | 61.62 |
| Os08t0523600-01 | Rice | cytosol, nucleus | 4.3 | 58.33 |
| GSMUA_Achr8P09790_001 | Banana | cytosol | 3.38 | 55.0 |
| GSMUA_Achr8P09780_001 | Banana | nucleus | 54.57 | 52.63 |
| GSMUA_Achr11P... | Banana | nucleus | 51.35 | 52.31 |
| TraesCS2D01G594100.1 | Wheat | cytosol | 9.07 | 50.86 |
| OQU80675 | Sorghum | nucleus | 15.76 | 48.24 |
| CDX81731 | Canola | plastid | 30.82 | 47.62 |
| KXG25352 | Sorghum | nucleus | 5.3 | 44.23 |
| CDY19981 | Canola | cytosol | 5.69 | 42.29 |
| VIT_13s0067g02230.t01 | Wine grape | mitochondrion | 2.92 | 41.76 |
| Bra026748.1-P | Field mustard | cytosol | 4.07 | 37.59 |
| CDY52868 | Canola | cytosol | 4.07 | 37.59 |
| KRH08040 | Soybean | cytosol | 2.84 | 35.92 |
| KRH45070 | Soybean | cytosol | 2.84 | 35.92 |
| CDY33382 | Canola | nucleus | 9.61 | 34.92 |
| AT1G15770.1 | Thale cress | cytosol | 7.69 | 34.13 |
| KRH52764 | Soybean | nucleus | 6.15 | 32.79 |
| CDY19982 | Canola | nucleus | 15.14 | 31.88 |
| Bra036204.1-P | Field mustard | nucleus | 15.14 | 31.88 |
| CDY35787 | Canola | nucleus | 21.14 | 30.9 |
| CDX85281 | Canola | nucleus | 21.29 | 30.04 |
| CDY66823 | Canola | cytosol, nucleus | 20.52 | 29.73 |
| Bra040585.1-P | Field mustard | nucleus | 20.52 | 29.7 |
| Bra025408.1-P | Field mustard | nucleus | 23.6 | 29.13 |
| CDY00085 | Canola | nucleus | 18.68 | 28.26 |
| CDX86356 | Canola | nucleus | 20.22 | 27.86 |
| KRH20610 | Soybean | cytosol | 14.68 | 27.21 |
| AT2G10440.1 | Thale cress | nucleus | 18.99 | 26.42 |
| CDY33381 | Canola | cytosol, extracellular | 6.3 | 25.39 |
| CDY19980 | Canola | nucleus | 11.15 | 24.45 |
| CDY36590 | Canola | cytosol | 5.23 | 23.21 |
| Bra026105.1-P | Field mustard | cytosol | 8.76 | 10.83 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G526100.1 | EnsemblPlantsGene:TraesCS7D01G526100 | Gene3D:1.10.246.20 | InterPro:MED15_KIX | ncoils:Coil | PFAM:PF16987 |
| SEG:seg | MapMan:15.3.3.3.5 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:621639241..621649852
Molecular Weight (calculated)
143165.0 Da
IEP (calculated)
9.700
GRAVY (calculated)
-0.804
Length
1301 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDANWRPTQG SDPAAGAGGV DPGAPPPPAG GDWRAGLQPD ARARIVNKIT ETLKKHLPAS APDGVNELQK IAVRFEEKIY TAATNQSDYL RKISLKMLSM
0101: ETKTQQAAGN AQVIPNQNNS TPGLPSEGSN QAQPSAIPLM SQQQARQPNT TSVQASSLTN IGQNLPGVNQ TSTMQNVSVM PQNTMNNGLA QGTSQDIYAA
0201: QRQMAGRQQQ QQSQQLIYQQ QQMLMKQKLQ QNSLMQPHIQ QQQSLLQPTQ MQSTQQSMMQ MSSGLHPVQS TVPQTQPMSR QSVTQSGIQQ NQLNSVQQSV
0301: PSLLQQPQQS VGRQQQQQAQ PSMHQQPSLQ RQQPNIPLQQ QQQQQLMGQQ PNLERNQLIG QQNGAVEMQQ QQRLPAQSNN LLNVQQTQQQ MLNQQSMPLH
0401: QPQQLGSQAN MSSLQQQQQN QQQQRMHMLQ MKAQQTQQQQ HAQQPPMGLM QPQSQHNQLQ QSQQHLMSQF QSQPNQLQQQ LGMQQQSSMQ QRLQTSGGML
0501: LQQNNMDQQK QFIQAQRGLQ EVSSSTSADS TTQTGLAGAG DWQEEIYQMI KSLKDQYFAE LSDLSNKISM KLQHVDSIIP PQKPSEQYDR MKNFKNMLDR
0601: ILQLLQISKS TIQPAMRDKV PQYEKQIISI LNSQRRKPVQ PQIQQQFQPP AGQAPNSSIL QQQQTSQNLQ QHDSHTNPQA SLSSMSTGLQ SSGVAGMQHV
0701: PVPPTTNFSA PTQQNGANIQ HQPVSNLEAA QGGNFNSLQH GSVSGALQQG NTGPMQGTVN TQPQTSSGML SHNSMSTMQP NGNSMQANAS SLQQLKQQQQ
0801: DHHMMQSQQM KRQMFQQYQQ KQQMLQQQFP IQQQLQKQQQ VQMQVPQLHA GNDVNESKAR QGTAVKPGVY QQHLGQRSNY YHQQLKQGGA FPISSPQNLQ
0901: ASSPQISHHS PQVDQHNLLP SQVKTGTPLN SANSPYVPSP SPSVAPSPIP VDSDKPHSNI SSLTNTGQTG HQQTSLAPQT QSIAVNTPGI SASPLLAEFT
1001: SVDGSQANMP TQVPTKSDAA ERPMDRLLKA LRTTQRESLN AAVSDIRSVV SMMDRIAGSA PGNGSRTAVG EDLVAMTKCR LQARNFITND GSGASKKMKR
1101: DISAMPLNVS SAGSVDDSFK QTFSVDTPDL QSTATSRAKR RKIEVNHALL EEIEEINQGL IDTELRVCED DDESLIATSE GTVIKCTYTA VAVSPSLKSM
1201: LASAHTSPIM PLRLLVPAGY PKCSPVLLDK FLDEQRNSDD LSSQAKSKFG VLLRGLDEPM SLREIARTWD ACARGAIAEY AQKSGGGSFS SSYGRWETCV
1301: V
0101: ETKTQQAAGN AQVIPNQNNS TPGLPSEGSN QAQPSAIPLM SQQQARQPNT TSVQASSLTN IGQNLPGVNQ TSTMQNVSVM PQNTMNNGLA QGTSQDIYAA
0201: QRQMAGRQQQ QQSQQLIYQQ QQMLMKQKLQ QNSLMQPHIQ QQQSLLQPTQ MQSTQQSMMQ MSSGLHPVQS TVPQTQPMSR QSVTQSGIQQ NQLNSVQQSV
0301: PSLLQQPQQS VGRQQQQQAQ PSMHQQPSLQ RQQPNIPLQQ QQQQQLMGQQ PNLERNQLIG QQNGAVEMQQ QQRLPAQSNN LLNVQQTQQQ MLNQQSMPLH
0401: QPQQLGSQAN MSSLQQQQQN QQQQRMHMLQ MKAQQTQQQQ HAQQPPMGLM QPQSQHNQLQ QSQQHLMSQF QSQPNQLQQQ LGMQQQSSMQ QRLQTSGGML
0501: LQQNNMDQQK QFIQAQRGLQ EVSSSTSADS TTQTGLAGAG DWQEEIYQMI KSLKDQYFAE LSDLSNKISM KLQHVDSIIP PQKPSEQYDR MKNFKNMLDR
0601: ILQLLQISKS TIQPAMRDKV PQYEKQIISI LNSQRRKPVQ PQIQQQFQPP AGQAPNSSIL QQQQTSQNLQ QHDSHTNPQA SLSSMSTGLQ SSGVAGMQHV
0701: PVPPTTNFSA PTQQNGANIQ HQPVSNLEAA QGGNFNSLQH GSVSGALQQG NTGPMQGTVN TQPQTSSGML SHNSMSTMQP NGNSMQANAS SLQQLKQQQQ
0801: DHHMMQSQQM KRQMFQQYQQ KQQMLQQQFP IQQQLQKQQQ VQMQVPQLHA GNDVNESKAR QGTAVKPGVY QQHLGQRSNY YHQQLKQGGA FPISSPQNLQ
0901: ASSPQISHHS PQVDQHNLLP SQVKTGTPLN SANSPYVPSP SPSVAPSPIP VDSDKPHSNI SSLTNTGQTG HQQTSLAPQT QSIAVNTPGI SASPLLAEFT
1001: SVDGSQANMP TQVPTKSDAA ERPMDRLLKA LRTTQRESLN AAVSDIRSVV SMMDRIAGSA PGNGSRTAVG EDLVAMTKCR LQARNFITND GSGASKKMKR
1101: DISAMPLNVS SAGSVDDSFK QTFSVDTPDL QSTATSRAKR RKIEVNHALL EEIEEINQGL IDTELRVCED DDESLIATSE GTVIKCTYTA VAVSPSLKSM
1201: LASAHTSPIM PLRLLVPAGY PKCSPVLLDK FLDEQRNSDD LSSQAKSKFG VLLRGLDEPM SLREIARTWD ACARGAIAEY AQKSGGGSFS SSYGRWETCV
1301: V
0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.