Factsheet for TraesCS1D01G348800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G346100.1	Wheat	nucleus	91.06	91.8
TraesCS1B01G359700.1	Wheat	cytosol, mitochondrion, nucleus	88.62	87.2
GSMUA_Achr8P09790_001	Banana	cytosol	30.89	47.5
Os08t0523600-01	Rice	cytosol, nucleus	36.59	46.88
VIT_13s0067g02230.t01	Wine grape	mitochondrion	26.02	35.16
KXG25352	Sorghum	nucleus	41.46	32.69
TraesCS2D01G594100.1	Wheat	cytosol	60.16	31.9
Bra026748.1-P	Field mustard	cytosol	35.77	31.21
CDY52868	Canola	cytosol	35.77	31.21
TraesCS7D01G546200.1	Wheat	nucleus	63.41	21.61
TraesCS5D01G551100.1	Wheat	nucleus	63.41	18.18
OQU80675	Sorghum	nucleus	56.1	16.24
HORVU5Hr1G106220.2	Barley	cytosol, nucleus	63.41	14.03
TraesCS1D01G411400.1	Wheat	nucleus	65.85	13.32
CDY33381	Canola	cytosol, extracellular	32.52	12.38
KRH52764	Soybean	nucleus	20.33	10.25
CDY36590	Canola	cytosol	24.39	10.24
TraesCS7D01G281700.2	Wheat	nucleus	78.05	7.31
TraesCS7D01G526100.1	Wheat	nucleus	70.73	6.69
Zm00001d031863_P013	Maize	nucleus	66.67	6.27
EES14038	Sorghum	nucleus	66.67	6.24
Os08t0564800-01	Rice	extracellular	66.67	6.21
CDY33382	Canola	nucleus	17.89	6.15
Zm00001d049894_P011	Maize	nucleus	65.04	6.12
GSMUA_Achr11P...	Banana	nucleus	56.1	5.4
GSMUA_Achr8P09780_001	Banana	nucleus	53.66	4.89
Bra026105.1-P	Field mustard	cytosol	39.84	4.65
Bra036204.1-P	Field mustard	nucleus	21.95	4.37
CDY19982	Canola	nucleus	21.14	4.21
CDY19980	Canola	nucleus	19.51	4.05
CDY00085	Canola	nucleus	26.83	3.84
CDY66823	Canola	cytosol, nucleus	26.02	3.56
Bra040585.1-P	Field mustard	nucleus	26.02	3.56
CDY35787	Canola	nucleus	25.2	3.48
KRH20610	Soybean	cytosol	19.51	3.42
CDX86356	Canola	nucleus	25.2	3.28
CDX85281	Canola	nucleus	23.58	3.15
Bra025408.1-P	Field mustard	nucleus	25.2	2.94
AT2G10440.1	Thale cress	nucleus	20.33	2.67
AT1G15770.1	Thale cress	cytosol	2.44	1.02
KRH08040	Soybean	cytosol	0.81	0.97
KRH45070	Soybean	cytosol	0.81	0.97
CDX81731	Canola	plastid	2.44	0.36
CDY19981	Canola	cytosol	0.0	0.0
PGSC0003DMT400082469	Potato	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS1D01G348800.1	EnsemblPlantsGene:TraesCS1D01G348800	Gene3D:1.10.246.20	GO:GO:0003674	GO:GO:0003712	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:KIX_dom_sf
InterPro:MED15_KIX	PANTHER:PTHR33137	PANTHER:PTHR33137:SF4	PFAM:PF16987	SEG:seg	SUPFAM:SSF47040
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:435295097..435297443

Molecular Weight (calculated)

13668.0 Da

IEP (calculated)

4.867

GRAVY (calculated)

-0.793

Length

123 amino acids

Sequence
(BLAST)

001: MDADSRPTQG SDPAAAAADP PSTGAGDWRA QLQPEARSRI VERMMETLKT HLPVSEPEGL NELQKIAVRF EQNIYTEATN QSDYFWKISL KMLPMESKTQ
101: QAPGNAHVIP NQNNSDKVPY TVN

Best Arabidopsis Sequence Match ( AT1G15780.1 )
(BLAST)

0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.