Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33381 | Canola | cytosol, extracellular | 83.62 | 75.85 |
| Os08t0523600-01 | Rice | cytosol, nucleus | 9.56 | 29.17 |
| Bra026105.1-P | Field mustard | cytosol | 91.47 | 25.45 |
| TraesCS1D01G348800.1 | Wheat | nucleus | 10.24 | 24.39 |
| CDY52868 | Canola | cytosol | 11.6 | 24.11 |
| CDY33380 | Canola | cytosol | 37.2 | 24.06 |
| TraesCS1A01G346100.1 | Wheat | nucleus | 9.9 | 23.77 |
| TraesCS1B01G359700.1 | Wheat | cytosol, mitochondrion, nucleus | 9.9 | 23.2 |
| CDY61380 | Canola | extracellular, vacuole | 31.4 | 22.44 |
| CDY36591 | Canola | cytosol | 38.57 | 21.69 |
| TraesCSU01G036900.1 | Wheat | cytosol | 16.72 | 21.59 |
| TraesCS2D01G594100.1 | Wheat | cytosol | 17.06 | 21.55 |
| HORVU2Hr1G123080.2 | Barley | cytosol | 16.72 | 21.21 |
| TraesCS2B01G599400.1 | Wheat | cytosol | 16.04 | 20.89 |
| CDY33382 | Canola | nucleus | 25.26 | 20.67 |
| TraesCS2B01G598700.1 | Wheat | cytosol | 15.7 | 19.83 |
| CDY33379 | Canola | cytosol | 5.46 | 19.51 |
| CDY35039 | Canola | cytosol | 8.53 | 18.12 |
| GSMUA_Achr8P09800_001 | Banana | nucleus | 8.53 | 17.86 |
| KXG25352 | Sorghum | nucleus | 9.22 | 17.31 |
| CDY53315 | Canola | nucleus | 10.92 | 14.29 |
| CDY36595 | Canola | cytosol | 15.7 | 13.49 |
| HORVU5Hr1G125120.1 | Barley | cytosol | 11.26 | 13.2 |
| CDX81732 | Canola | nucleus | 10.92 | 13.17 |
| OQU80675 | Sorghum | nucleus | 15.02 | 10.35 |
| TraesCS7D01G546200.1 | Wheat | nucleus | 12.63 | 10.25 |
| CDY36589 | Canola | nucleus | 41.3 | 10.09 |
| TraesCS7B01G493100.1 | Wheat | nucleus | 11.95 | 9.43 |
| TraesCS7B01G495400.1 | Wheat | cytosol | 12.63 | 9.16 |
| TraesCS4A01G315600.1 | Wheat | nucleus | 12.97 | 7.87 |
| TraesCS5D01G551100.1 | Wheat | nucleus | 11.26 | 7.69 |
| TraesCS1D01G411400.1 | Wheat | nucleus | 15.36 | 7.4 |
| TraesCS1B01G433100.1 | Wheat | nucleus | 15.36 | 7.4 |
| VIT_08s0040g00740.t01 | Wine grape | nucleus | 10.24 | 7.37 |
| TraesCS1A01G403500.2 | Wheat | nucleus | 15.02 | 7.28 |
| HORVU5Hr1G106220.2 | Barley | cytosol, nucleus | 13.65 | 7.19 |
| CDX83970 | Canola | mitochondrion | 23.55 | 5.78 |
| CDY36587 | Canola | nucleus | 22.87 | 5.62 |
| HORVU7Hr1G118370.1 | Barley | nucleus | 21.84 | 5.23 |
| CDY61379 | Canola | nucleus | 23.21 | 5.23 |
| TraesCS7D01G526100.1 | Wheat | nucleus | 23.21 | 5.23 |
| TraesCS7A01G540000.1 | Wheat | nucleus | 23.21 | 5.22 |
| TraesCS7B01G460900.1 | Wheat | nucleus | 23.21 | 5.22 |
| TraesCS7A01G283500.3 | Wheat | nucleus | 22.53 | 5.05 |
| HORVU7Hr1G060970.1 | Barley | nucleus | 22.53 | 5.03 |
| TraesCS7D01G281700.2 | Wheat | nucleus | 22.53 | 5.03 |
| TraesCS7B01G177500.1 | Wheat | nucleus | 22.53 | 5.02 |
| CDY19982 | Canola | nucleus | 10.58 | 5.02 |
| Os08t0564800-01 | Rice | extracellular | 22.53 | 5.0 |
| EES14038 | Sorghum | nucleus | 22.18 | 4.95 |
| Zm00001d049894_P011 | Maize | nucleus | 21.84 | 4.89 |
| Zm00001d031863_P013 | Maize | nucleus | 20.82 | 4.66 |
| CDY35787 | Canola | nucleus | 12.63 | 4.16 |
| CDY66823 | Canola | cytosol, nucleus | 12.29 | 4.01 |
| CDY00085 | Canola | nucleus | 11.6 | 3.95 |
| CDX81731 | Canola | plastid | 11.26 | 3.92 |
| CDY53314 | Canola | mitochondrion, nucleus | 11.26 | 3.88 |
| CDY19980 | Canola | nucleus | 7.51 | 3.71 |
| CDY00086 | Canola | nucleus | 5.46 | 3.7 |
| CDX86356 | Canola | nucleus | 9.9 | 3.07 |
| CDX85281 | Canola | nucleus | 9.56 | 3.04 |
| CDY19981 | Canola | cytosol | 1.37 | 2.29 |
Protein Annotations
| EnsemblPlants:CDY36590 | EnsemblPlantsGene:GSBRNA2T00062287001 | Gene3D:1.10.246.20 | GO:A0A078HE12 | InterPro:MED15_KIX | ncoils:Coil |
| PANTHER:PTHR33137 | PANTHER:PTHR33137:SF4 | PFAM:PF16987 | ProteinID:CDY36590 | ProteinID:CDY36590.1 | UniParc:UPI0004EE2BE2 |
| UniProt:A0A078HE12 | MapMan:35.1 | : | : | : | : |
Description
BnaA06g10430DBnaA06g10430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE12]
Coordinates
chrLK032378:-:347448..350609
Molecular Weight (calculated)
33100.5 Da
IEP (calculated)
8.437
GRAVY (calculated)
-0.396
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSQACSPPL RTEALKKQHL PFSGPEGVNE HSKIASRFED KVFNTAANLN DYLRKISLEV LTIENTVKNA ADPAGKANVD VGSLMDNNSL RPSYLPNRES
101: AVDTGDWRAQ LPPATRKMIV NNITDTLVKH HSGTERSNER RGFAARLEEN IFNSADHQVI HWLYNINVYL LDLIHNLFFG LIFYINIQID YLRQISAKIS
201: LLAASNSLPL DLGHLGINRG DWRTQHPPGS RQKNVNKLLE TLKKHVPYSG KEGIEELMRI AVSFEELIFN TARNQVDYLS KISLKMQSLE EAT
101: AVDTGDWRAQ LPPATRKMIV NNITDTLVKH HSGTERSNER RGFAARLEEN IFNSADHQVI HWLYNINVYL LDLIHNLFFG LIFYINIQID YLRQISAKIS
201: LLAASNSLPL DLGHLGINRG DWRTQHPPGS RQKNVNKLLE TLKKHVPYSG KEGIEELMRI AVSFEELIFN TARNQVDYLS KISLKMQSLE EAT
001: MDTTGDWRTQ FPSASRSRIV NKIMETQLKQ LPFIRPEGTN ELRKIAVRFE EKLFNNASNQ TEYLRQICMK MLNMETKSQN AAGSSSADDN TPPLVPEPSV
101: PNNEPAVNTG DWRTQQPQDS RQKNINALLD TLKKIVPHSG KEGIDELMRI AVSLEELIFN SAINQEDYLG KISLKMRTM
101: PNNEPAVNTG DWRTQQPQDS RQKNINALLD TLKKIVPHSG KEGIDELMRI AVSLEELIFN SAINQEDYLG KISLKMRTM
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (sour /.../BI BLink). [Source:TAIR;Acc:AT1G15790]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.