Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G177500.1 | Wheat | nucleus | 95.43 | 95.29 |
| TraesCS7A01G283500.3 | Wheat | nucleus | 94.82 | 95.26 |
| TraesCS7D01G281700.2 | Wheat | nucleus | 95.13 | 95.13 |
| HORVU7Hr1G118370.1 | Barley | nucleus | 79.97 | 85.85 |
| Os08t0564800-01 | Rice | extracellular | 81.26 | 80.83 |
| EES14038 | Sorghum | nucleus | 79.66 | 79.6 |
| Zm00001d031863_P013 | Maize | nucleus | 76.31 | 76.61 |
| Zm00001d049894_P011 | Maize | nucleus | 76.16 | 76.45 |
| HORVU5Hr1G106220.2 | Barley | cytosol, nucleus | 30.01 | 70.86 |
| HORVU5Hr1G125120.1 | Barley | cytosol | 11.96 | 62.8 |
| PGSC0003DMT400082469 | Potato | extracellular | 4.72 | 62.63 |
| Os08t0523600-01 | Rice | cytosol, nucleus | 4.57 | 62.5 |
| GSMUA_Achr8P09790_001 | Banana | cytosol | 3.58 | 58.75 |
| HORVU2Hr1G123080.2 | Barley | cytosol | 10.05 | 57.14 |
| GSMUA_Achr8P09780_001 | Banana | nucleus | 55.75 | 54.26 |
| GSMUA_Achr11P... | Banana | nucleus | 52.55 | 54.03 |
| KXG25352 | Sorghum | nucleus | 5.86 | 49.36 |
| OQU80675 | Sorghum | nucleus | 15.84 | 48.94 |
| CDX81731 | Canola | plastid | 31.15 | 48.57 |
| VIT_13s0067g02230.t01 | Wine grape | mitochondrion | 3.12 | 45.05 |
| CDY19981 | Canola | cytosol | 5.41 | 40.57 |
| Bra026748.1-P | Field mustard | cytosol | 4.27 | 39.72 |
| CDY52868 | Canola | cytosol | 4.27 | 39.72 |
| KRH08040 | Soybean | cytosol | 2.82 | 35.92 |
| KRH45070 | Soybean | cytosol | 2.82 | 35.92 |
| CDY33382 | Canola | nucleus | 9.6 | 35.2 |
| KRH52764 | Soybean | nucleus | 6.25 | 33.61 |
| Bra036204.1-P | Field mustard | nucleus | 15.46 | 32.85 |
| AT1G15770.1 | Thale cress | cytosol | 7.31 | 32.76 |
| CDY19982 | Canola | nucleus | 15.38 | 32.69 |
| CDY35787 | Canola | nucleus | 20.79 | 30.67 |
| CDX85281 | Canola | nucleus | 20.94 | 29.83 |
| CDY66823 | Canola | cytosol, nucleus | 20.03 | 29.29 |
| Bra040585.1-P | Field mustard | nucleus | 20.03 | 29.25 |
| Bra025408.1-P | Field mustard | nucleus | 23.08 | 28.75 |
| CDY00085 | Canola | nucleus | 18.43 | 28.14 |
| CDX86356 | Canola | nucleus | 19.88 | 27.65 |
| KRH20610 | Soybean | cytosol | 14.55 | 27.21 |
| AT2G10440.1 | Thale cress | nucleus | 18.66 | 26.2 |
| CDY19980 | Canola | nucleus | 11.35 | 25.13 |
| CDY33381 | Canola | cytosol, extracellular | 6.02 | 24.46 |
| CDY36590 | Canola | cytosol | 5.03 | 22.53 |
| Bra026105.1-P | Field mustard | cytosol | 8.91 | 11.11 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G060970.1 | EnsemblPlantsGene:HORVU7Hr1G060970 | Gene3D:1.10.246.20 | GO:GO:0003674 | GO:GO:0003712 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:KIX_dom_sf |
| InterPro:MED15_KIX | PANTHER:PTHR33137 | PANTHER:PTHR33137:SF4 | PFAM:PF16987 | SEG:seg | SUPFAM:SSF47040 |
| UniParc:UPI000B463A8F | UniProt:A0A287WNU5 | MapMan:15.3.3.3.5 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:283452544..283474320
Molecular Weight (calculated)
144380.0 Da
IEP (calculated)
9.615
GRAVY (calculated)
-0.746
Length
1313 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDANWRPTQG SDPAAAAAGV DPNAPPSTGG DWRAQLQPEA RSRIVNKIME TLKKHLPVSV PEGLNELQKI AVRFEEKIYT AATNQSDYLR KISLKMLSME
0101: TKTQQAPGNA QVIPNQNNSA PGLPPQGSNQ AQTSVIPLMS QQQARQPNSS TSVQASSLAN IGQSLPGVNQ TSTMQNASGM PQNTMNNGLA QGTSQDIYAA
0201: QRQMAGRQQQ QQSQQLIYHQ QQMLMKQKLQ QNSLMQPHIQ QQQSLLQPTQ MQSSQQSMMQ MSSGLHPAQS TVPQTQPMAM QSATQSGIQQ NQLNSVQQSV
0301: QSLLQQPQQS VGRQQQQAQS SMHQQPSLQS QQPNIPLQQQ PQQLMGQQPN LQQNQLIGQQ NGAMDMQQQQ RLPVQSNNLL NVQQTQQMLN QTSMPLHQPQ
0401: QLGSQSNMSG LQQQQQNQQP QQLLGTVPNV SNMQRMHMLQ TKVQQPQQQQ HAQQPPMGLM QPQSQHNQLQ QSQQHLMSQF QSQPNQVQQQ LGMQQSSMQQ
0501: RLQTSGGMLL QQNNMDQQKQ FIQAHRGLQE VSSSTSADST AQTGHAGTGD WQEEIYQMIK SLKDLYFAEL SELFNKISVK LQHVDSIIPP QKPSEQYDRM
0601: KSFKIMLERI LQMLQISKTA VQPAMRDKVP QYEKQIISIL NSQRRKPVQP QIQQQFQPPV GQAPNSSISQ QQQPSQTLQQ HDSHANPQAS LSSMSTGLQS
0701: SSAAGIQHVP APSTKNFSAP TQQNGANIQH QADSNLEAAQ GGNFNSSQHG SVSSALQQGS TVLMQGTMNA QLQTTSSMLS HNSMSTMQRN GNSMQANASS
0801: LQQLKQQHQD HQMMQSQQMK RQMFQQYQQK QQMLQQQLPI QQQLQKQQQV QIQVPQLHAG NDVNELKVRQ GTAMKPGMYQ QHLGQRNNYY HQQLKGAFPI
0901: SSPQNNLQAS SPQISHHSPQ VDQHNPLPSQ VKTGTPLHSA NSPFVPSPSP SIAPSPIPVD SDKPHSNISS LTNTGQAGHQ QTSLVPQAQS IAVNTPGISA
1001: SPLLAEFTSV DGSQANMPSQ APTKSSAIER PLDRLLKALR TTQRESLNAA VSDIRCVVSM IDRIAGSAPG NGSRAAVGED LVAMTRCRLQ ARNFITNDGN
1101: GASKKMKRDT SAMPLNVSSA GSVNDSFKQT FSVDTPDLQS TASSQAKWQK TEVNHALLEE IQEINQQLID TELHVCEDDA ESFAGTCEGA EGTVIKCTFT
1201: AVAVSPSLKS IFASAQMSPI TPLRLLVPAR YPKCSPVLLD KFPDEQRNSD DLSMKANSKF GILLRGLAEP MSLREIARTW DACARKAIAE YAQKTGGGSF
1301: SSSYGCWESC VGA
0101: TKTQQAPGNA QVIPNQNNSA PGLPPQGSNQ AQTSVIPLMS QQQARQPNSS TSVQASSLAN IGQSLPGVNQ TSTMQNASGM PQNTMNNGLA QGTSQDIYAA
0201: QRQMAGRQQQ QQSQQLIYHQ QQMLMKQKLQ QNSLMQPHIQ QQQSLLQPTQ MQSSQQSMMQ MSSGLHPAQS TVPQTQPMAM QSATQSGIQQ NQLNSVQQSV
0301: QSLLQQPQQS VGRQQQQAQS SMHQQPSLQS QQPNIPLQQQ PQQLMGQQPN LQQNQLIGQQ NGAMDMQQQQ RLPVQSNNLL NVQQTQQMLN QTSMPLHQPQ
0401: QLGSQSNMSG LQQQQQNQQP QQLLGTVPNV SNMQRMHMLQ TKVQQPQQQQ HAQQPPMGLM QPQSQHNQLQ QSQQHLMSQF QSQPNQVQQQ LGMQQSSMQQ
0501: RLQTSGGMLL QQNNMDQQKQ FIQAHRGLQE VSSSTSADST AQTGHAGTGD WQEEIYQMIK SLKDLYFAEL SELFNKISVK LQHVDSIIPP QKPSEQYDRM
0601: KSFKIMLERI LQMLQISKTA VQPAMRDKVP QYEKQIISIL NSQRRKPVQP QIQQQFQPPV GQAPNSSISQ QQQPSQTLQQ HDSHANPQAS LSSMSTGLQS
0701: SSAAGIQHVP APSTKNFSAP TQQNGANIQH QADSNLEAAQ GGNFNSSQHG SVSSALQQGS TVLMQGTMNA QLQTTSSMLS HNSMSTMQRN GNSMQANASS
0801: LQQLKQQHQD HQMMQSQQMK RQMFQQYQQK QQMLQQQLPI QQQLQKQQQV QIQVPQLHAG NDVNELKVRQ GTAMKPGMYQ QHLGQRNNYY HQQLKGAFPI
0901: SSPQNNLQAS SPQISHHSPQ VDQHNPLPSQ VKTGTPLHSA NSPFVPSPSP SIAPSPIPVD SDKPHSNISS LTNTGQAGHQ QTSLVPQAQS IAVNTPGISA
1001: SPLLAEFTSV DGSQANMPSQ APTKSSAIER PLDRLLKALR TTQRESLNAA VSDIRCVVSM IDRIAGSAPG NGSRAAVGED LVAMTRCRLQ ARNFITNDGN
1101: GASKKMKRDT SAMPLNVSSA GSVNDSFKQT FSVDTPDLQS TASSQAKWQK TEVNHALLEE IQEINQQLID TELHVCEDDA ESFAGTCEGA EGTVIKCTFT
1201: AVAVSPSLKS IFASAQMSPI TPLRLLVPAR YPKCSPVLLD KFPDEQRNSD DLSMKANSKF GILLRGLAEP MSLREIARTW DACARKAIAE YAQKTGGGSF
1301: SSSYGCWESC VGA
0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.