Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G526100.1 | Wheat | nucleus | 86.1 | 80.94 |
| TraesCS7B01G460900.1 | Wheat | nucleus | 86.1 | 80.81 |
| TraesCS7A01G540000.1 | Wheat | nucleus | 85.85 | 80.65 |
| HORVU7Hr1G060970.1 | Barley | nucleus | 85.85 | 79.97 |
| TraesCS7B01G495400.1 | Wheat | cytosol | 24.94 | 75.5 |
| TraesCS7D01G546200.1 | Wheat | nucleus | 21.83 | 73.96 |
| TraesCS7B01G493100.1 | Wheat | nucleus | 22.4 | 73.85 |
| Os08t0564800-01 | Rice | extracellular | 77.02 | 71.36 |
| EES14038 | Sorghum | nucleus | 74.16 | 69.03 |
| HORVU5Hr1G106220.2 | Barley | cytosol, nucleus | 31.15 | 68.53 |
| Zm00001d049894_P011 | Maize | nucleus | 71.71 | 67.05 |
| Zm00001d031863_P013 | Maize | nucleus | 70.48 | 65.9 |
| Os08t0523600-01 | Rice | cytosol, nucleus | 4.74 | 60.42 |
| HORVU5Hr1G125120.1 | Barley | cytosol | 12.18 | 59.6 |
| PGSC0003DMT400082469 | Potato | extracellular | 4.74 | 58.59 |
| GSMUA_Achr8P09790_001 | Banana | cytosol | 3.68 | 56.25 |
| HORVU2Hr1G123080.2 | Barley | cytosol | 9.57 | 50.65 |
| GSMUA_Achr8P09780_001 | Banana | nucleus | 53.07 | 48.11 |
| OQU80675 | Sorghum | nucleus | 16.6 | 47.76 |
| GSMUA_Achr11P... | Banana | nucleus | 49.47 | 47.38 |
| KXG25352 | Sorghum | nucleus | 5.97 | 46.79 |
| CDX81731 | Canola | plastid | 31.4 | 45.61 |
| VIT_13s0067g02230.t01 | Wine grape | mitochondrion | 3.27 | 43.96 |
| CDY19981 | Canola | cytosol | 5.97 | 41.71 |
| CDY52868 | Canola | cytosol | 4.42 | 38.3 |
| Bra026748.1-P | Field mustard | cytosol | 4.42 | 38.3 |
| KRH08040 | Soybean | cytosol | 3.11 | 36.89 |
| KRH45070 | Soybean | cytosol | 3.11 | 36.89 |
| AT1G15770.1 | Thale cress | cytosol | 8.09 | 33.79 |
| CDY33382 | Canola | nucleus | 9.65 | 32.96 |
| KRH52764 | Soybean | nucleus | 6.38 | 31.97 |
| Bra036204.1-P | Field mustard | nucleus | 16.03 | 31.72 |
| CDY19982 | Canola | nucleus | 15.94 | 31.55 |
| CDX85281 | Canola | nucleus | 21.59 | 28.63 |
| CDY35787 | Canola | nucleus | 20.69 | 28.43 |
| CDY00085 | Canola | nucleus | 18.89 | 26.86 |
| CDY66823 | Canola | cytosol, nucleus | 19.71 | 26.84 |
| Bra040585.1-P | Field mustard | nucleus | 19.71 | 26.81 |
| CDX86356 | Canola | nucleus | 20.69 | 26.8 |
| Bra025408.1-P | Field mustard | nucleus | 23.06 | 26.76 |
| KRH20610 | Soybean | cytosol | 15.04 | 26.21 |
| AT2G10440.1 | Thale cress | nucleus | 19.3 | 25.24 |
| CDY33381 | Canola | cytosol, extracellular | 6.38 | 24.15 |
| CDY19980 | Canola | nucleus | 11.2 | 23.1 |
| CDY36590 | Canola | cytosol | 5.23 | 21.84 |
| Bra026105.1-P | Field mustard | cytosol | 8.75 | 10.16 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G118370.1 | EnsemblPlantsGene:HORVU7Hr1G118370 | Gene3D:1.10.246.20 | InterPro:MED15_KIX | ncoils:Coil | PANTHER:PTHR33137 |
| PANTHER:PTHR33137:SF4 | PFAM:PF16987 | SEG:seg | UniParc:UPI000B487D5C | UniProt:A0A287XYN6 | MapMan:15.3.3.3.5 |
Description
No Description!
Coordinates
chrchr7H:-:647498307..647511012
Molecular Weight (calculated)
134395.0 Da
IEP (calculated)
9.770
GRAVY (calculated)
-0.774
Length
1223 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDANWRPTQG SDPAAGAADP TAPPPPAAGD WRAQLQPEAR GRIVNKITET LKKHLPVSAP DGLNELQKIA VRFEEKIYTA ASNQADYLRK ISLKMLSMET
0101: KTQQPPGNAQ VIPNQNNSAP GLPPQGSNQA QTSAIPLMSQ QHAQQPNTST SVQASSVTNI GQNLPGANQT STMQNMSVMP QNTMNNGLAQ GTSQDIYAAQ
0201: RQMAGRQQHQ QSQQLIYHQQ QMLMKQKLQQ NSLMQPQQSV GRQQQQAQSS MHQQPSLQNQ QPNIPLQQQQ QLMGQQPNLQ QNQLIGQQSG AMDMQQQQRL
0301: PVQSSNLLNV QQPQQMLNQQ PMPLHQPQQL VSQGNMSGLQ QQQQNQQQQQ QQQQQLLGTV PNVSNMQRIH MLQTKAQQPQ QQQHAQQPAM GLMRPQSQHN
0401: QLQQSQQHLI SQFQSQPNQL QQQLGIQQQS SIQQRLQPSG GMLLQKNNMD QQKQIIQAQR GLQEVSSSTS ADSTSQIGHA GAGEWQEEIY QMIKNLKDQY
0501: FPELSELFNK ISVKLQHVDN MIPPQKPSEQ YDRMKNFKTM LGRILHMLQI SKSSIQPAMR DKVPQYEKQI ISILSSQRTK PVQPQIQQQF QPPAGQAPDS
0601: SILQQQQTSQ NLQQHDSHTN PQASLSSKST GLQSSGVTGI QHVPLPPTTN FSATTQHQAV SNLEAAQRGN FNSLQHGLVS GALQQGTMNT QLQTSGSMLS
0701: HNPISTMQAS GNSMQPNASS LQQQQQDHHL MQSEQMKRQM YQYQQKQQML QQQLPVQQQQ QKQQQVQMQV PQLHAGNDVR QGTAMKPGIY QHHLSQRSNY
0801: YQQQLKQSGD FPISSPNLQA SSPQISHHSP QIDKHNQLSS QIKTGTPLHS ANSPFVPSPS PSIAPSPIPV DSDKPHSIIS SLSNTGQTGH QQTSLAPQTK
0901: SMSLNTPGIS ASPLLAEFTS VDGSQANMPT QAPTKSNAAE RPMDRLLKAL RTTQRESLNA AVSDIRSVVS MMDRIAGSAP GNGSRAAVGE DLVAMTKCRL
1001: QARNFITNDG SGASKKMKRD TSAMPLNVSS TGSVDDSFKQ TFSADTPDVQ STATSRANKR QKVEVNHALL EEIQAINQEL IDTELNVCEE DADSFAAASE
1101: GTVIKCTYTP VAVSPSLKSM LASAQTSLIM PLRLLVPAGY PKCASPVILD KFPDEQRNSD DLSSKARSKF GVSLRGLAEP MSLREIARAW DASARGAIVE
1201: CAQKTGGGSF SSSYGCWEAC VGA
0101: KTQQPPGNAQ VIPNQNNSAP GLPPQGSNQA QTSAIPLMSQ QHAQQPNTST SVQASSVTNI GQNLPGANQT STMQNMSVMP QNTMNNGLAQ GTSQDIYAAQ
0201: RQMAGRQQHQ QSQQLIYHQQ QMLMKQKLQQ NSLMQPQQSV GRQQQQAQSS MHQQPSLQNQ QPNIPLQQQQ QLMGQQPNLQ QNQLIGQQSG AMDMQQQQRL
0301: PVQSSNLLNV QQPQQMLNQQ PMPLHQPQQL VSQGNMSGLQ QQQQNQQQQQ QQQQQLLGTV PNVSNMQRIH MLQTKAQQPQ QQQHAQQPAM GLMRPQSQHN
0401: QLQQSQQHLI SQFQSQPNQL QQQLGIQQQS SIQQRLQPSG GMLLQKNNMD QQKQIIQAQR GLQEVSSSTS ADSTSQIGHA GAGEWQEEIY QMIKNLKDQY
0501: FPELSELFNK ISVKLQHVDN MIPPQKPSEQ YDRMKNFKTM LGRILHMLQI SKSSIQPAMR DKVPQYEKQI ISILSSQRTK PVQPQIQQQF QPPAGQAPDS
0601: SILQQQQTSQ NLQQHDSHTN PQASLSSKST GLQSSGVTGI QHVPLPPTTN FSATTQHQAV SNLEAAQRGN FNSLQHGLVS GALQQGTMNT QLQTSGSMLS
0701: HNPISTMQAS GNSMQPNASS LQQQQQDHHL MQSEQMKRQM YQYQQKQQML QQQLPVQQQQ QKQQQVQMQV PQLHAGNDVR QGTAMKPGIY QHHLSQRSNY
0801: YQQQLKQSGD FPISSPNLQA SSPQISHHSP QIDKHNQLSS QIKTGTPLHS ANSPFVPSPS PSIAPSPIPV DSDKPHSIIS SLSNTGQTGH QQTSLAPQTK
0901: SMSLNTPGIS ASPLLAEFTS VDGSQANMPT QAPTKSNAAE RPMDRLLKAL RTTQRESLNA AVSDIRSVVS MMDRIAGSAP GNGSRAAVGE DLVAMTKCRL
1001: QARNFITNDG SGASKKMKRD TSAMPLNVSS TGSVDDSFKQ TFSADTPDVQ STATSRANKR QKVEVNHALL EEIQAINQEL IDTELNVCEE DADSFAAASE
1101: GTVIKCTYTP VAVSPSLKSM LASAQTSLIM PLRLLVPAGY PKCASPVILD KFPDEQRNSD DLSSKARSKF GVSLRGLAEP MSLREIARAW DASARGAIVE
1201: CAQKTGGGSF SSSYGCWEAC VGA
0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.