CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45070	Soybean	cytosol	40.98	97.09
KRH08040	Soybean	cytosol	40.57	96.12
KRH08039	Soybean	cytosol	21.72	63.1
KRH45069	Soybean	nucleus	35.25	51.5
HORVU5Hr1G125120.1	Barley	cytosol	22.54	22.0
TraesCS1D01G348800.1	Wheat	nucleus	10.25	20.33
TraesCS1B01G359700.1	Wheat	cytosol, mitochondrion, nucleus	10.25	20.0
TraesCS1A01G346100.1	Wheat	nucleus	9.84	19.67
TraesCS7D01G546200.1	Wheat	nucleus	29.1	19.67
TraesCS7B01G495400.1	Wheat	cytosol	27.87	16.83
Os08t0523600-01	Rice	cytosol, nucleus	6.15	15.62
TraesCS5D01G551100.1	Wheat	nucleus	26.64	15.15
TraesCS4A01G315600.1	Wheat	nucleus	28.69	14.49
TraesCS7B01G493100.1	Wheat	nucleus	21.72	14.29
OQU80675	Sorghum	nucleus	24.59	14.12
KXG25352	Sorghum	nucleus	8.61	13.46
TraesCS1A01G403500.2	Wheat	nucleus	31.97	12.91
TraesCS2B01G599400.1	Wheat	cytosol	11.89	12.89
TraesCS1B01G433100.1	Wheat	nucleus	31.97	12.83
TraesCS2D01G594100.1	Wheat	cytosol	11.89	12.5
TraesCSU01G036900.1	Wheat	cytosol	11.48	12.33
HORVU5Hr1G106220.2	Barley	cytosol, nucleus	27.87	12.23
TraesCS1D01G411400.1	Wheat	nucleus	30.33	12.17
GSMUA_Achr8P09800_001	Banana	nucleus	6.97	12.14
TraesCS2B01G598700.1	Wheat	cytosol	11.48	12.07
HORVU2Hr1G123080.2	Barley	cytosol	11.07	11.69
KRH47405	Soybean	nucleus	39.75	9.13
KRH23611	Soybean	nucleus	46.31	8.53
KRH09691	Soybean	nucleus	46.72	8.47
KRH44505	Soybean	nucleus	39.75	7.44
KRH20610	Soybean	cytosol	18.85	6.55
TraesCS7A01G283500.3	Wheat	nucleus	34.43	6.43
TraesCS7D01G281700.2	Wheat	nucleus	34.43	6.4
HORVU7Hr1G118370.1	Barley	nucleus	31.97	6.38
TraesCS7B01G177500.1	Wheat	nucleus	34.02	6.31
HORVU7Hr1G060970.1	Barley	nucleus	33.61	6.25
TraesCS7D01G526100.1	Wheat	nucleus	32.79	6.15
TraesCS7A01G540000.1	Wheat	nucleus	32.38	6.07
TraesCS7B01G460900.1	Wheat	nucleus	32.38	6.06
Zm00001d049894_P011	Maize	nucleus	31.97	5.96
Zm00001d031863_P013	Maize	nucleus	30.74	5.73
EES14038	Sorghum	nucleus	30.74	5.71
Os08t0564800-01	Rice	extracellular	30.74	5.68
VIT_08s0040g00730.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02003434	EMBL:BT095991	EnsemblPlants:KRH52764	EnsemblPlantsGene:GLYMA_06G086700	EntrezGene:100797838	ProteinID:KRH52764
ProteinID:KRH52764.1	SEG:seg	UniParc:UPI0001B16BDF	UniProt:C6TEG8	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr6:+:6709523..6712616

Molecular Weight (calculated)

28644.0 Da

IEP (calculated)

10.238

GRAVY (calculated)

-0.805

Length

244 amino acids

Sequence
(BLAST)

001: MSASPLDSTA QTGQSSGGDW QEQVYQHIKS MKESYLPELN EMYQKIATQL QQHNSLPTQP KLDQLEKMNV FKMLERIIAF LQVSKSNISP NFKEKLGSYE
101: NHIINFINRK RHKKAMPPMQ SRQLPLPHID WQEEVYQKIK SMKENYLPEL NEMYQKSASK LQRHTSLPQQ PKSYKLEKLK KFMKMLECAI AFLQVSKSNM
201: SPNYRLKLDS CEKQIIKIIN INRPKKIVPP LQYGQFPPPH MQSH

Best Arabidopsis Sequence Match ( AT1G15780.2 )
(BLAST)

0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETRYKQ ILQSQVNRTI DFPYRVEQTS TIQLKSSQES
1301: STRNPLLETA LSSYRNTVWF LEQQRKRGPV VQSYGKVQHI AKKFVTADVA QRHSQDMGRL CSGSDL

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.