CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G348800.1	Wheat	nucleus	16.24	56.1
TraesCS1B01G359700.1	Wheat	cytosol, mitochondrion, nucleus	16.47	56.0
TraesCS1A01G346100.1	Wheat	nucleus	16.0	55.74
KXG25352	Sorghum	nucleus	18.12	49.36
GSMUA_Achr8P09790_001	Banana	cytosol	9.18	48.75
Os08t0523600-01	Rice	cytosol, nucleus	10.35	45.83
TraesCS7D01G546200.1	Wheat	nucleus	31.76	37.4
HORVU2Hr1G123080.2	Barley	cytosol	20.0	36.8
TraesCS2B01G599400.1	Wheat	cytosol	19.29	36.44
VIT_13s0067g02230.t01	Wine grape	mitochondrion	7.76	36.26
TraesCS2D01G594100.1	Wheat	cytosol	19.76	36.21
TraesCSU01G036900.1	Wheat	cytosol	19.29	36.12
TraesCS2B01G598700.1	Wheat	cytosol	19.06	34.91
TraesCS7B01G495400.1	Wheat	cytosol	32.0	33.66
TraesCS7B01G493100.1	Wheat	nucleus	28.94	33.15
KRH45070	Soybean	cytosol	7.76	32.04
KRH08040	Soybean	cytosol	7.76	32.04
CDY52868	Canola	cytosol	10.35	31.21
Bra026748.1-P	Field mustard	cytosol	10.35	31.21
TraesCS1B01G433100.1	Wheat	nucleus	36.94	25.82
TraesCS1D01G411400.1	Wheat	nucleus	36.71	25.66
TraesCS1A01G403500.2	Wheat	nucleus	35.29	24.83
HORVU5Hr1G106220.2	Barley	cytosol, nucleus	32.24	24.64
KRH52764	Soybean	nucleus	14.12	24.59
CDY33382	Canola	nucleus	16.94	20.11
EES14038	Sorghum	nucleus	59.29	19.18
CDY33381	Canola	cytosol, extracellular	12.71	16.72
HORVU7Hr1G118370.1	Barley	nucleus	47.76	16.6
Os08t0564800-01	Rice	extracellular	51.29	16.52
TraesCS7D01G281700.2	Wheat	nucleus	49.65	16.07
TraesCS7A01G283500.3	Wheat	nucleus	49.41	16.07
TraesCS7B01G177500.1	Wheat	nucleus	49.65	16.05
TraesCS7A01G540000.1	Wheat	nucleus	48.71	15.9
HORVU7Hr1G060970.1	Barley	nucleus	48.94	15.84
TraesCS7D01G526100.1	Wheat	nucleus	48.24	15.76
TraesCS7B01G460900.1	Wheat	nucleus	47.29	15.43
CDY36590	Canola	cytosol	10.35	15.02
GSMUA_Achr11P...	Banana	nucleus	39.06	13.0
GSMUA_Achr8P09780_001	Banana	nucleus	40.0	12.6
CDY19980	Canola	nucleus	16.71	11.97
CDY19982	Canola	nucleus	15.53	10.68
Bra036204.1-P	Field mustard	nucleus	15.53	10.68
CDY35787	Canola	nucleus	20.0	9.55
CDY66823	Canola	cytosol, nucleus	20.0	9.47
Bra040585.1-P	Field mustard	nucleus	20.0	9.45
CDX81731	Canola	plastid	18.59	9.38
CDX86356	Canola	nucleus	20.71	9.32
CDY00085	Canola	nucleus	18.82	9.3
CDX85281	Canola	nucleus	19.76	9.11
Bra025408.1-P	Field mustard	nucleus	21.18	8.54
AT1G15770.1	Thale cress	cytosol	5.65	8.19
KRH20610	Soybean	cytosol	13.18	7.98
AT2G10440.1	Thale cress	nucleus	16.47	7.49
Bra026105.1-P	Field mustard	cytosol	15.53	6.27
PGSC0003DMT400082469	Potato	extracellular	0.0	0.0
CDY19981	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:OQU80675	EnsemblPlantsGene:SORBI_3007G162901	Gene3D:1.10.246.20	InterPro:MED15_KIX	PANTHER:PTHR33137	PANTHER:PTHR33137:SF4
PFAM:PF16987	ProteinID:OQU80675	ProteinID:OQU80675.1	SEG:seg	UniParc:UPI000B4257D2	UniProt:A0A1Z5RB59
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:59698592..59707878

Molecular Weight (calculated)

48013.3 Da

IEP (calculated)

9.388

GRAVY (calculated)

-0.732

Length

425 amino acids

Sequence
(BLAST)

001: MDGAANWSPA MGDGPAAIAD ADGVDPNAAA PVGGDWRTHL QPEERNRIVN MIMETLKKHL PVPVPEGLGE LHKTAMRFEE KIYAAAINQS DYLRKISLKV
101: MSMESQANTQ QNPGNAQVIS NQNPPGPASA DSTAQIAPPD TGDLQELYQM IKSLKDQYFV ELNDLYNKVS IKIQHIDNHM PSQKSAEQYE KMNGFKVMLE
201: RMLHFLQVNK SNIQPSFREK IPIYERQIQS ILSSQIRKSV QAPGLQMFQQ SASVDSAAQT GHPGASDLQE ELYQMIKSLK DQYFMELNDL YHKISMKIQH
301: IDNHMPSQKS AEQYEKMKNF NVMLENMLHF LQVNKSSIQP SFRKKIPFYE RQIISILSLR KRKPSGGPAL SSNISQQHQD SQSLQEHDSH TNQKPQASIP
401: SMYTGGSNSK RKKQNKPRCH LCKNG

Best Arabidopsis Sequence Match ( AT1G15780.2 )
(BLAST)

0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETRYKQ ILQSQVNRTI DFPYRVEQTS TIQLKSSQES
1301: STRNPLLETA LSSYRNTVWF LEQQRKRGPV VQSYGKVQHI AKKFVTADVA QRHSQDMGRL CSGSDL

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.