Factsheet for TraesCS7D01G546200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G495400.1	Wheat	cytosol	95.01	84.9
TraesCS7B01G493100.1	Wheat	nucleus	85.04	82.75
TraesCS1D01G348800.1	Wheat	nucleus	21.61	63.41
Os08t0523600-01	Rice	cytosol, nucleus	13.3	50.0
GSMUA_Achr8P09790_001	Banana	cytosol	9.7	43.75
TraesCS5D01G551100.1	Wheat	nucleus	49.58	41.72
TraesCS1D01G411400.1	Wheat	nucleus	69.81	41.45
KRH45070	Soybean	cytosol	10.53	36.89
KRH08040	Soybean	cytosol	10.53	36.89
VIT_13s0067g02230.t01	Wine grape	mitochondrion	9.14	36.26
TraesCS2D01G594100.1	Wheat	cytosol	21.88	34.05
KXG25352	Sorghum	nucleus	14.13	32.69
OQU80675	Sorghum	nucleus	37.4	31.76
Bra026748.1-P	Field mustard	cytosol	11.63	29.79
CDY52868	Canola	cytosol	11.63	29.79
KRH52764	Soybean	nucleus	19.67	29.1
CDY33382	Canola	nucleus	24.65	24.86
HORVU7Hr1G118370.1	Barley	nucleus	73.96	21.83
TraesCS7D01G281700.2	Wheat	nucleus	79.22	21.78
TraesCS7D01G526100.1	Wheat	nucleus	77.84	21.6
TraesCS7A01G540000.1	Wheat	nucleus	77.29	21.43
Os08t0564800-01	Rice	extracellular	66.76	18.26
EES14038	Sorghum	nucleus	63.16	17.35
Zm00001d031863_P013	Maize	nucleus	62.05	17.13
Zm00001d049894_P011	Maize	nucleus	61.22	16.9
CDY33381	Canola	cytosol, extracellular	12.47	13.93
GSMUA_Achr11P...	Banana	nucleus	46.54	13.16
CDY36590	Canola	cytosol	10.25	12.63
GSMUA_Achr8P09780_001	Banana	nucleus	47.09	12.6
CDY19980	Canola	nucleus	18.84	11.47
CDX81731	Canola	plastid	23.82	10.21
Bra036204.1-P	Field mustard	nucleus	17.17	10.03
CDY19982	Canola	nucleus	17.17	10.03
CDY35787	Canola	nucleus	24.65	10.0
CDY66823	Canola	cytosol, nucleus	23.82	9.58
Bra040585.1-P	Field mustard	nucleus	23.82	9.57
CDX86356	Canola	nucleus	23.82	9.11
CDX85281	Canola	nucleus	22.71	8.89
Bra025408.1-P	Field mustard	nucleus	25.21	8.63
CDY00085	Canola	nucleus	20.22	8.49
AT2G10440.1	Thale cress	nucleus	20.78	8.02
KRH20610	Soybean	cytosol	14.68	7.55
AT1G15770.1	Thale cress	cytosol	4.43	5.46
Bra026105.1-P	Field mustard	cytosol	14.96	5.13
CDY19981	Canola	cytosol	0.0	0.0
PGSC0003DMT400082469	Potato	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7D01G546200.1	EnsemblPlantsGene:TraesCS7D01G546200	Gene3D:1.10.246.20	GO:GO:0003674	GO:GO:0003712	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:KIX_dom_sf
InterPro:MED15_KIX	PANTHER:PTHR33137	PANTHER:PTHR33137:SF4	PFAM:PF16987	SEG:seg	SUPFAM:SSF47040
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:633053146..633057136

Molecular Weight (calculated)

41126.3 Da

IEP (calculated)

10.581

GRAVY (calculated)

-0.839

Length

361 amino acids

Sequence
(BLAST)

001: MDTNWRPIQG SDPAAGGDSP PPDQAIGAPI WIQPQARTRI VNKISEALKR HLPVSAVSHP DGLNKLQQIA VRFEQRIYDA ATSQSDYFRK ISLKMLVMGT
101: KTQQAPGNDQ VIPNQNNSGV NQTSKMQNRH QRPSLQRHQP NITLQPQQQH AQQPAMGLMQ PRSQPNQLQE SQQHIMSQFQ AQPNQLKKQL GMHQQFSMQQ
201: RVQTSGGMLL QQNNMDQKNV FIQAQKGLQE ASSSTSADFT AQSGHAGARD WQEDIYQMIQ SLKDQYFAEL IELFNKISVK LHHVDSIIPR QKPSEQYDRM
301: KSFKIMLDRI LQVLQMSKST IQPAMRDKIP QYEKQIITIL NSQRKPVQPQ VQQQLQPPPG K

Best Arabidopsis Sequence Match ( AT1G15780.1 )
(BLAST)

0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETSKEN EDLSSKAMAR FNILLRSLSQ PMSLKDIAKT
1301: WDACARAVIC EYAQQFGGGT FSSKYGTWEK YVAAS

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.