Factsheet for TraesCS7B01G493100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G495400.1	Wheat	cytosol	95.69	87.87
TraesCS7D01G546200.1	Wheat	nucleus	82.75	85.04
TraesCS1B01G359700.1	Wheat	cytosol, mitochondrion, nucleus	20.22	60.0
Os08t0523600-01	Rice	cytosol, nucleus	12.94	50.0
TraesCS1B01G433100.1	Wheat	nucleus	70.89	43.26
GSMUA_Achr8P09790_001	Banana	cytosol	9.16	42.5
VIT_13s0067g02230.t01	Wine grape	mitochondrion	8.63	35.16
TraesCS2B01G598700.1	Wheat	cytosol	21.83	34.91
TraesCS2B01G599400.1	Wheat	cytosol	21.02	34.67
KXG25352	Sorghum	nucleus	13.48	32.05
Bra026748.1-P	Field mustard	cytosol	11.32	29.79
CDY52868	Canola	cytosol	11.32	29.79
OQU80675	Sorghum	nucleus	33.15	28.94
HORVU7Hr1G118370.1	Barley	nucleus	73.85	22.4
TraesCS7B01G177500.1	Wheat	nucleus	78.44	22.13
TraesCS7A01G540000.1	Wheat	nucleus	76.55	21.81
KRH52764	Soybean	nucleus	14.29	21.72
TraesCS7B01G460900.1	Wheat	nucleus	75.74	21.57
CDY33382	Canola	nucleus	19.41	20.11
KRH45070	Soybean	cytosol	5.39	19.42
KRH08040	Soybean	cytosol	5.39	19.42
Os08t0564800-01	Rice	extracellular	67.39	18.94
EES14038	Sorghum	nucleus	64.15	18.11
Zm00001d031863_P013	Maize	nucleus	63.07	17.89
Zm00001d049894_P011	Maize	nucleus	62.53	17.74
CDY33381	Canola	cytosol, extracellular	12.13	13.93
GSMUA_Achr11P...	Banana	nucleus	45.82	13.31
GSMUA_Achr8P09780_001	Banana	nucleus	46.9	12.9
CDY36590	Canola	cytosol	9.43	11.95
CDY19980	Canola	nucleus	16.98	10.62
CDY35787	Canola	nucleus	23.18	9.66
CDY66823	Canola	cytosol, nucleus	22.37	9.24
Bra040585.1-P	Field mustard	nucleus	22.37	9.23
CDX81731	Canola	plastid	19.41	8.55
Bra036204.1-P	Field mustard	nucleus	14.02	8.41
CDY19982	Canola	nucleus	14.02	8.41
CDY00085	Canola	nucleus	18.6	8.02
Bra025408.1-P	Field mustard	nucleus	22.37	7.87
CDX86356	Canola	nucleus	19.41	7.63
CDX85281	Canola	nucleus	18.6	7.48
AT2G10440.1	Thale cress	nucleus	15.9	6.31
KRH20610	Soybean	cytosol	11.05	5.84
Bra026105.1-P	Field mustard	cytosol	14.02	4.94
AT1G15770.1	Thale cress	cytosol	3.5	4.44
CDY19981	Canola	cytosol	0.0	0.0
PGSC0003DMT400082469	Potato	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7B01G493100.1	EnsemblPlantsGene:TraesCS7B01G493100	Gene3D:1.10.246.20	GO:GO:0003674	GO:GO:0003712	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:KIX_dom_sf
InterPro:MED15_KIX	PANTHER:PTHR33137	PANTHER:PTHR33137:SF4	PFAM:PF16987	SEG:seg	SUPFAM:SSF47040
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:744660863..744663762

Molecular Weight (calculated)

41882.7 Da

IEP (calculated)

9.169

GRAVY (calculated)

-0.757

Length

371 amino acids

Sequence
(BLAST)

001: MDANWRPIQG SDPASGGDPP PPDQAIGAPI WIQPQARTRI VNKISEALKR HLPVSAMSHP DGLNQLQQIA VRFEQRIYDA ATSQSDYFWK ISLKMLAMET
101: KTQQAPGNDH VIPNQNNSGV NQTSKMQNRY AMAQNAINNG LEQGTSQDIY AAQIQMVGRQ QQQQSQQLIY HQHQRPSLQS QQPNITLQPQ QQHAQQPAMG
201: LMQPRSQPNQ LQESQQHIMS QFQAQPNQLK KQLGMQQQFS MQQRVQTSGG MLLQQNNMDQ KNVFIQAQKG LQEASSSTSA DFTAQSGHAG AGDWQEDIYQ
301: MISSLKDQYF AEIIELFNKI SVKLHHVDSI IPPQKPSEQY DSMKSFKIML DRILQMLQMS KSTIQPASNL L

Best Arabidopsis Sequence Match ( AT1G15780.2 )
(BLAST)

0001: MDNNNWRPSL PNGEPAMDTG DWRTQLPPDS RQKIVNKIME TLKKHLPFSG PEGINELRRI AARFEEKIFS GALNQTDYLR KISMKMLTME TKSQNAAGSS
0101: AAIPAANNGT SIDSIPTNQG QLLPGSLSTN QSQAPQPLLS QTMQNNTASG MTGSTALPSS MPPVSSITNN NTTSVVNQNA NMQNVAGMLQ DSSGQHGLSS
0201: NMFSGPQRQM LGRPHAMSSQ QQQQPYLYQQ QLQQQLLKQN FQSGNVPNPN SLLPSHIQQQ QQNVLQPNQL HSSQQPGVPT SATQPSTVNS APLQGLHTNQ
0301: QSSPQLSSQQ TTQSMLRQHQ SSMLRQHPQS QQASGIHQQQ SSLPQQSISP LQQQPTQLMR QQAANSSGIQ QKQMMGQHVV GDMQQQHQQR LLNQQNNVMN
0401: IQQQQSQQQP LQQPQQQQKQ QPPAQQQLMS QQNSLQATHQ NPLGTQSNVA GLQQPQQQML NSQVGNSSLQ NNQHSVHMLS QPTVGLQRTH QAGHGLYSSQ
0501: GQQSQNQPSQ QQMMPQLQSH HQQLGLQQQP NLLQQDVQQR LQASGQVTGS LLPPQNVVDQ QRQLYQSQRT LPEMPSSSLD STAQTESANG GDWQEEVYQK
0601: IKSMKETYLP DLNEIYQRVA AKLQQDSMPQ QQRSDQLEKL RQFKTMLERM IQFLSVSKSN IMPALKDKVA YYEKQIIGFL NMHRPRKPVQ QGQLPQSQMQ
0701: PMQQPQSQTV QDQSHDNQTN PQMQSMSMQG AGPRAQQSSM TNMQSNVLSS RPGVSAPQQN IPSSIPASSL ESGQGNTLNN GQQVAMGSMQ QNTSQLVNNS
0801: SASAQSGLST LQSNVNQPQL SSSLLQHQHL KQQQDQQMQL KQQFQQRQMQ QQQLQARQQQ QQQQLQARQQ AAQLQQMNDM NDLTSRQGMN VSRGMFQQHS
0901: MQGQRANYPL QQLKPGAVSS PQLLQGASPQ MSQHLSPQVD QKNTVNKMGT PLQPANSPFV VPSPSSTPLA PSPMQVDSEK PGSSSLSMGN IARQQATGMQ
1001: GVVQSLAIGT PGISASPLLQ EFTSPDGNIL NSSTITSGKP SATELPIERL IRAVKSISPQ ALSSAVSDIG SVVSMVDRIA GSAPGNGSRA SVGEDLVAMT
1101: KCRLQARNFM TQEGMMATKK MKRHTTAMPL SVASLGGSVG DNYKQFAGSE TSDLESTATS DGKKARTETE HALLEEIKEI NQRLIDTVVE ISDDEDAADP
1201: SEVAISSIGC EGTTVRFSFI AVSLSPALKA HLSSTQMSPI QPLRLLVPCS YPNGSPSLLD KLPVETRYKQ ILQSQVNRTI DFPYRVEQTS TIQLKSSQES
1301: STRNPLLETA LSSYRNTVWF LEQQRKRGPV VQSYGKVQHI AKKFVTADVA QRHSQDMGRL CSGSDL

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Oth /.../aryotes - 38082 (source: NCBI BLink). [Source:TAIR;Acc:AT1G15780]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.